Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10606 Vaccinium macrocarpon HOM05D000678 ORTHO05D001709 1.2e-99 366.7 203 100.0
Rhsim09G0103400 Rhododendron simsii HOM05D000678 ORTHO05D001709 4.0e-76 288.5 205 75.1
Dinv31588 Davidia involucrata HOM05D000678 ORTHO05D001709 2.9e-42 176.0 210 58.1
CSS0005059 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D001709 4.2e-41 172.2 210 61.0
Manes.06G064500 Manihot esculenta HOM05D000678 ORTHO05D001709 8.4e-34 147.9 207 51.2
CiPaw.05G243000 Carya illinoinensis HOM05D000678 ORTHO05D001709 3.2e-33 146.0 209 51.7
Duzib251G0315 Durio zibethinus HOM05D000678 ORTHO05D001709 1.6e-32 143.7 211 50.2
Sabra10G0089900 Salix brachista HOM05D000678 ORTHO05D001709 2.1e-32 143.3 210 51.9
Cfa015832 Carpinus fangiana HOM05D000678 ORTHO05D001709 1.0e-31 141.0 208 49.5
Cc11_g09610 Coffea canephora HOM05D000678 ORTHO05D001709 1.3e-31 140.6 204 50.5
Cpa.g.sc65.72 Carica papaya HOM05D000678 ORTHO05D001709 1.8e-31 140.2 213 53.5
Duzib268G0701 Durio zibethinus HOM05D000678 ORTHO05D001709 1.8e-31 140.2 211 49.3
Thecc.02G221000 Theobroma cacao HOM05D000678 ORTHO05D001709 2.3e-31 139.8 212 50.5
TAR629G1340 Trochodendron aralioides HOM05D000678 ORTHO05D001709 3.9e-31 139.0 206 49.0
MSTRG.2214 Avicennia marina HOM05D000678 ORTHO05D001709 1.1e-30 137.5 208 47.1
Haze_00659 Corylus avellana HOM05D000678 ORTHO05D001709 3.3e-30 136.0 192 51.0
Nn4g23966 Nelumbo nucifera HOM05D000678 ORTHO05D001709 3.7e-29 132.5 209 45.9
TWI31G0040 Tripterygium wilfordii HOM05D000678 ORTHO05D001709 6.3e-29 131.7 209 45.9
Manes.14G107500 Manihot esculenta HOM05D000678 ORTHO05D001709 1.1e-28 131.0 207 47.3
Gohir.D05G324700 Gossypium hirsutum HOM05D000678 ORTHO05D001709 1.4e-28 130.6 211 48.8
Nitab4.5_0002112g0180 Nicotiana tabacum HOM05D000678 ORTHO05D001709 1.4e-28 130.6 209 46.4
Atru.chr11.244 Acer truncatum HOM05D000678 ORTHO05D001709 3.1e-28 129.4 217 46.1
Potri.010G119500 Populus trichocarpa HOM05D000678 ORTHO05D001709 4.1e-28 129.0 209 49.3
Actinidia14926 Actinidia chinensis HOM05D000678 ORTHO05D001709 5.3e-28 128.6 165 55.2
Dinv16142 Davidia involucrata HOM05D000678 ORTHO05D001709 5.3e-28 128.6 212 49.5
SGA_v2.0_scaffold38G15009 Striga asiatica HOM05D000678 ORTHO05D001709 5.3e-28 128.6 209 46.9
QL01p010688 Quercus lobata HOM05D000678 ORTHO05D001709 6.9e-28 128.3 207 51.7
QL01p010763 Quercus lobata HOM05D000678 ORTHO05D001709 6.9e-28 128.3 207 51.7
CANSAT80G2533 Cannabis sativa HOM05D000678 ORTHO05D001709 1.2e-27 127.5 206 46.6
Peaxi162Scf00564g00614 Petunia axillaris HOM05D000678 ORTHO05D001709 1.2e-27 127.5 202 48.0
Solyc04g007460.4 Solanum lycopersicum HOM05D000678 ORTHO05D001709 1.2e-27 127.5 201 48.3
Sopen04g002530 Solanum pennellii HOM05D000678 ORTHO05D001709 1.2e-27 127.5 201 48.3
Potri.008G124700 Populus trichocarpa HOM05D000678 ORTHO05D001709 2.6e-27 126.3 211 46.9
Hma1.2p1_0767F.1_g215510 Hydrangea macrophylla HOM05D000678 ORTHO05D001709 3.4e-27 125.9 192 49.5
Actinidia38364 Actinidia chinensis HOM05D000678 ORTHO05D001709 4.5e-27 125.6 209 47.8
Eucgr.G02235 Eucalyptus grandis HOM05D000678 ORTHO05D001709 4.5e-27 125.6 201 45.8
TWI75G0363 Tripterygium wilfordii HOM05D000678 ORTHO05D001709 7.6e-27 124.8 209 42.6
TPR.G4821 Trifolium pratense HOM05D000678 ORTHO05D001709 1.3e-26 124.0 202 47.5
unitig_0.g2340 Utricularia gibba HOM05D000678 ORTHO05D001709 1.7e-26 123.6 211 46.4
Gorai.009G348900 Gossypium raimondii HOM05D000678 ORTHO05D001709 2.2e-26 123.2 191 49.7
CAN.G1052.2 Capsicum annuum HOM05D000678 ORTHO05D001709 5.0e-26 122.1 199 48.7
COL.COLO4_32124 Corchorus olitorius HOM05D000678 ORTHO05D001709 5.0e-26 122.1 178 49.4
MSTRG.864 Avicennia marina HOM05D000678 ORTHO05D001709 6.5e-26 121.7 203 48.8
Nitab4.5_0000694g0090 Nicotiana tabacum HOM05D000678 ORTHO05D001709 6.5e-26 121.7 211 42.7
Sc04g0005960 Simmondsia chinensis HOM05D000678 ORTHO05D001709 6.5e-26 121.7 219 46.6
Medtr1g109470 Medicago truncatula HOM05D000678 ORTHO05D001709 8.4e-26 121.3 202 43.6
arahy.Tifrunner.gnm1.ann1.K9IHFT Arachis hypogaea HOM05D000678 ORTHO05D001709 1.1e-25 120.9 215 44.7
Gohir.A05G314300 Gossypium hirsutum HOM05D000678 ORTHO05D001709 1.4e-25 120.6 191 49.2
Nn3g17962 Nelumbo nucifera HOM05D000678 ORTHO05D001709 1.4e-25 120.6 207 47.3
MSTRG.7639 Avicennia marina HOM05D000678 ORTHO05D001709 3.2e-25 119.4 203 46.3
Psat6g224080 Pisum sativum HOM05D000678 ORTHO05D001709 9.3e-25 117.9 203 45.3
Prupe.1G317300 Prunus persica HOM05D000678 ORTHO05D001709 2.1e-24 116.7 208 46.6
Solyc05g008830.3 Solanum lycopersicum HOM05D000678 ORTHO05D001709 2.7e-24 116.3 202 45.5
RcHm_v2.0_Chr4g0434361 Rosa chinensis HOM05D000678 ORTHO05D001709 3.5e-24 115.9 225 42.2
TWI79G1500 Tripterygium wilfordii HOM05D000678 ORTHO05D001709 3.5e-24 115.9 196 43.9
Sabra08G0094200 Salix brachista HOM05D000678 ORTHO05D001709 6.1e-24 115.2 187 48.7
Sopen05g004590 Solanum pennellii HOM05D000678 ORTHO05D001709 6.1e-24 115.2 202 45.5
Sc11g0003800 Simmondsia chinensis HOM05D000678 ORTHO05D001709 7.9e-24 114.8 213 41.8
MD13G1034900 Malus domestica HOM05D000678 ORTHO05D001709 1.8e-23 113.6 209 46.4
SalBow8G2881 Salvia bowleyana HOM05D000678 ORTHO05D001709 3.9e-23 112.5 219 41.1
TAR622G0820 Trochodendron aralioides HOM05D000678 ORTHO05D001709 3.9e-23 112.5 186 47.8
arahy.Tifrunner.gnm1.ann1.GYF1N1 Arachis hypogaea HOM05D000678 ORTHO05D001709 1.1e-22 110.9 190 45.8
Ciclev10014450m.g Citrus clementina HOM05D000678 ORTHO05D001709 1.1e-22 110.9 220 44.1
MELO3C012278.2 Cucumis melo HOM05D000678 ORTHO05D001709 1.5e-22 110.5 206 46.6
CsaV3_5G034630 Cucumis sativus L. HOM05D000678 ORTHO05D001709 2.5e-22 109.8 206 46.1
Lj5g0002524 Lotus japonicus HOM05D000678 ORTHO05D001709 3.3e-22 109.4 205 45.9
DCAR_026752 Daucus carota HOM05D000678 ORTHO05D001709 1.3e-21 107.5 219 42.9
Glyma.20G121100 Glycine max HOM05D000678 ORTHO05D001709 1.6e-21 107.1 181 45.9
PGSC0003DMG400005971 Solanum tuberosum HOM05D000678 ORTHO05D001709 1.6e-21 107.1 210 43.3
Lalb_Chr21g0308711 Lupinus albus HOM05D000678 ORTHO05D001709 2.2e-21 106.7 208 43.8
Phvul.007G032500 Phaseolus vulgaris HOM05D000678 ORTHO05D001709 2.2e-21 106.7 184 45.7
Haze_18745 Corylus avellana HOM05D000678 ORTHO05D001709 3.7e-21 105.9 208 43.3
arahy.Tifrunner.gnm1.ann1.XF22CN Arachis hypogaea HOM05D000678 ORTHO05D001709 4.8e-21 105.5 209 42.6
EL10Ac6g14296 Beta vulgaris HOM05D000678 ORTHO05D001709 4.8e-21 105.5 225 46.2
DCAR_007267 Daucus carota HOM05D000678 ORTHO05D001709 4.8e-21 105.5 190 43.7
Glyma.10G270200 Glycine max HOM05D000678 ORTHO05D001709 4.8e-21 105.5 178 46.6
CAN.G610.21 Capsicum annuum HOM05D000678 ORTHO05D001709 6.3e-21 105.1 210 42.9
Peaxi162Scf00179g00536 Petunia axillaris HOM05D000678 ORTHO05D001709 6.3e-21 105.1 209 44.5
Oeu048370.1 Olea europaea HOM05D000678 ORTHO05D001709 8.2e-21 104.8 190 44.2
FAN17G2574 Fragaria x ananassa HOM05D000678 ORTHO05D001709 1.4e-20 104.0 186 44.6
Aqoxy3G00193 Aquilegia oxysepala HOM05D000678 ORTHO05D001709 1.8e-20 103.6 216 42.1
Ca_06894_v3 Cicer arietinum L. HOM05D000678 ORTHO05D001709 1.8e-20 103.6 202 43.1
FvH4_4g26650 Fragaria vesca HOM05D000678 ORTHO05D001709 1.8e-20 103.6 191 45.0
FAN12G3926 Fragaria x ananassa HOM05D000678 ORTHO05D001709 1.8e-20 103.6 191 45.0
FAN22G2322 Fragaria x ananassa HOM05D000678 ORTHO05D001709 4.1e-20 102.4 226 40.7
MD16G1036800 Malus domestica HOM05D000678 ORTHO05D001709 5.3e-20 102.1 210 43.8
VMungo0720G1183 Vigna mungo HOM05D000678 ORTHO05D001709 5.3e-20 102.1 184 44.0
Glyma.09G116000 Glycine max HOM05D000678 ORTHO05D001709 6.9e-20 101.7 208 43.8
CiPaw.15G136200 Carya illinoinensis HOM05D000678 ORTHO05D001709 9.0e-20 101.3 206 41.3
ClCG05G022440 Citrullus lanatus HOM05D000678 ORTHO05D001709 1.5e-19 100.5 205 43.9
Prupe.5G225400 Prunus persica HOM05D000678 ORTHO05D001709 2.6e-19 99.8 205 42.0
Sed0002355 Sechium edule HOM05D000678 ORTHO05D001709 3.4e-19 99.4 207 43.0
CAN.G1129.45 Capsicum annuum HOM05D000678 ORTHO05D001709 1.0e-18 97.8 205 40.5
FAN12G2310 Fragaria x ananassa HOM05D000678 ORTHO05D001709 1.0e-18 97.8 224 41.1
SalBow8G3645 Salvia bowleyana HOM05D000678 ORTHO05D001709 1.7e-18 97.1 222 40.5
Hund25030 Selenicereus undatus HOM05D000678 ORTHO05D001709 5.0e-18 95.5 222 40.1
Duzib205G2049 Durio zibethinus HOM05D000678 ORTHO05D001709 8.5e-18 94.7 213 41.3
Nitab4.5_0001456g0060 Nicotiana tabacum HOM05D000678 ORTHO05D001709 8.5e-18 94.7 205 39.5
Sed0019532 Sechium edule HOM05D000678 ORTHO05D001709 8.5e-18 94.7 206 41.7
Sopen11g011850 Solanum pennellii HOM05D000678 ORTHO05D001709 1.4e-17 94.0 129 55.0
unitig_52.g17378 Utricularia gibba HOM05D000678 ORTHO05D001709 2.5e-17 93.2 215 39.1
HanXRQChr15g0477391 Helianthus annuus HOM05D000678 ORTHO05D001709 7.2e-17 91.7 211 39.3
THA.LOC104823972 Tarenaya hassleriana HOM05D000678 ORTHO05D001709 7.2e-17 91.7 209 43.1
MSTRG.13559 Avicennia marina HOM05D000678 ORTHO05D001709 9.4e-17 91.3 206 39.8
Peaxi162Scf00683g00336 Petunia axillaris HOM05D000678 ORTHO05D001709 9.4e-17 91.3 205 40.5
Cfa019725 Carpinus fangiana HOM05D000678 ORTHO05D001709 1.6e-16 90.5 200 39.5
Dinv17517 Davidia involucrata HOM05D000678 ORTHO05D001709 1.6e-16 90.5 204 41.7
Lalb_Chr17g0338801 Lupinus albus HOM05D000678 ORTHO05D001709 2.7e-16 89.7 193 46.6
MD14G1230400 Malus domestica HOM05D000678 ORTHO05D001709 1.0e-15 87.8 207 41.1
Manes.05G120200 Manihot esculenta HOM05D000678 ORTHO05D001709 1.0e-15 87.8 219 37.4
Oeu053815.1 Olea europaea HOM05D000678 ORTHO05D001709 1.0e-15 87.8 184 41.8
MD06G1221200 Malus domestica HOM05D000678 ORTHO05D001709 1.4e-15 87.4 213 39.4
PGSC0003DMG400005666 Solanum tuberosum HOM05D000678 ORTHO05D001709 1.8e-15 87.0 205 38.5
Oeu000990.1 Olea europaea HOM05D000678 ORTHO05D001709 2.3e-15 86.7 210 38.6
Cc04_g06810 Coffea canephora HOM05D000678 ORTHO05D001709 3.0e-15 86.3 206 37.9
PGR119G1609 Punica granatum HOM05D000678 ORTHO05D001709 3.0e-15 86.3 214 41.1
Gorai.001G068000 Gossypium raimondii HOM05D000678 ORTHO05D001709 3.9e-15 85.9 214 37.4
CANSAT80G2524 Cannabis sativa HOM05D000678 ORTHO05D001709 6.7e-15 85.1 226 38.1
QL10p026814 Quercus lobata HOM05D000678 ORTHO05D001709 6.7e-15 85.1 211 39.8
DCAR_023628 Daucus carota HOM05D000678 ORTHO05D001709 1.1e-14 84.3 206 40.3
ECA234G2420 Erigeron canadensis HOM05D000678 ORTHO05D001709 1.1e-14 84.3 211 39.3
Sopen03g037820 Solanum pennellii HOM05D000678 ORTHO05D001709 2.0e-14 83.6 207 38.2
Oeu014298.1 Olea europaea HOM05D000678 ORTHO05D001709 4.3e-14 82.4 194 39.2
Lsat_1_v5_gn_3_62121 Lactuca sativa HOM05D000678 ORTHO05D001709 7.4e-14 81.6 209 37.3
Thecc.03G043200 Theobroma cacao HOM05D000678 ORTHO05D001709 7.4e-14 81.6 220 38.6
HanXRQChr16g0529181 Helianthus annuus HOM05D000678 ORTHO05D001709 9.7e-14 81.3 220 39.5
Cpa.g.sc3.457 Carica papaya HOM05D000678 ORTHO05D001709 2.2e-13 80.1 216 38.9
Oeu007192.1 Olea europaea HOM05D000678 ORTHO05D001709 2.8e-13 79.7 181 40.3
TAR374G0028 Trochodendron aralioides HOM05D000678 ORTHO05D001709 3.7e-13 79.3 177 41.8
GSVIVG01008346001 Vitis vinifera HOM05D000678 ORTHO05D001709 3.7e-13 79.3 196 42.3
ECA246G0908 Erigeron canadensis HOM05D000678 ORTHO05D001709 4.8e-13 79.0 224 38.8
GSVIVG01030974001 Vitis vinifera HOM05D000678 ORTHO05D001709 6.3e-13 78.6 210 36.2
SHI16241 Sapria himalayana HOM05D000678 ORTHO05D001709 1.4e-12 77.4 206 37.4
VMungo0464G1982 Vigna mungo HOM05D000678 ORTHO05D001709 1.4e-12 77.4 213 35.7
RcHm_v2.0_Chr7g0179361 Rosa chinensis HOM05D000678 ORTHO05D001709 1.8e-12 77.0 188 37.8
Actinidia16025 Actinidia chinensis HOM05D000678 ORTHO05D001709 4.1e-12 75.9 195 35.4
Sp2g12650 Schrenkiella parvula HOM05D000678 ORTHO05D001709 5.3e-12 75.5 213 39.0
COL.COLO4_38516 Corchorus olitorius HOM05D000678 ORTHO05D001709 9.1e-12 74.7 221 35.3
FAN07G1955 Fragaria x ananassa HOM05D000678 ORTHO05D001709 9.1e-12 74.7 165 41.2
BcaC06g34210 Brassica carinata HOM05D000678 ORTHO05D001709 1.5e-11 73.9 213 37.6
C07p31640 Brassica napus HOM05D000678 ORTHO05D001709 1.5e-11 73.9 213 37.6
AL5G10140 Arabidopsis lyrata HOM05D000678 ORTHO05D001709 2.6e-11 73.2 212 38.7
A06p44580 Brassica napus HOM05D000678 ORTHO05D001709 2.6e-11 73.2 213 37.6
BraA06t27332Z Brassica rapa HOM05D000678 ORTHO05D001709 2.6e-11 73.2 213 37.6
Lj6A753T52 Lonicera japonica HOM05D000678 ORTHO05D001709 3.4e-11 72.8 205 34.6
Duzib068G1423 Durio zibethinus HOM05D000678 ORTHO05D001709 4.5e-11 72.4 209 35.4
ClCG06G014590 Citrullus lanatus HOM05D000678 ORTHO05D001709 5.9e-11 72.0 196 31.6
BcaC06g31326 Brassica carinata HOM05D000678 ORTHO05D001709 7.7e-11 71.6 216 37.0
BolC7t43703H Brassica oleracea HOM05D000678 ORTHO05D001709 7.7e-11 71.6 214 37.9
Thhalv10000795m.g Eutrema salsugineum HOM05D000678 ORTHO05D001709 1.3e-10 70.9 211 42.2
CsaV3_1G004030 Cucumis sativus L. HOM05D000678 ORTHO05D001709 1.7e-10 70.5 196 31.1
MELO3C017326.2 Cucumis melo HOM05D000678 ORTHO05D001709 2.2e-10 70.1 200 32.5
Sed0011837 Sechium edule HOM05D000678 ORTHO05D001709 2.2e-10 70.1 209 35.4
AT2G01190 Arabidopsis thaliana HOM05D000678 ORTHO05D001709 5.0e-10 68.9 213 38.0
ECA240G4724 Erigeron canadensis HOM05D000678 ORTHO05D001709 5.0e-10 68.9 200 38.5
Actinidia35104 Actinidia chinensis HOM05D000678 ORTHO05D001709 6.5e-10 68.6 215 35.3
THA.LOC104805056 Tarenaya hassleriana HOM05D000678 ORTHO05D001709 6.5e-10 68.6 209 35.9
Atru.chr9.920 Acer truncatum HOM05D000678 ORTHO05D001709 1.1e-09 67.8 216 35.2
Medtr6g082400 Medicago truncatula HOM05D000678 ORTHO05D001709 1.1e-09 67.8 208 34.1
Oeu017515.1 Olea europaea HOM05D000678 ORTHO05D001709 1.1e-09 67.8 204 35.3
MBI09_g25149_MAGBIO Magnolia biondii HOM05D000678 ORTHO05D001709 1.9e-09 67.0 223 35.4
Potri.012G053500 Populus trichocarpa HOM05D000678 ORTHO05D001709 1.9e-09 67.0 205 34.6
Gohir.D07G064400 Gossypium hirsutum HOM05D000678 ORTHO05D001709 3.2e-09 66.2 222 34.2
Rhsim12G0141200 Rhododendron simsii HOM05D000678 ORTHO05D001709 3.2e-09 66.2 134 37.3
Ciclev10007669m.g Citrus clementina HOM05D000678 ORTHO05D001709 5.5e-09 65.5 226 35.0
FAN08G3466 Fragaria x ananassa HOM05D000678 ORTHO05D001709 7.2e-09 65.1 212 33.0
Migut.L01001 Erythranthe guttata HOM05D000678 ORTHO05D001709 1.6e-08 63.9 221 40.7
FAN13G2912 Fragaria x ananassa HOM05D000678 ORTHO05D001709 1.6e-08 63.9 212 33.0
Gohir.A07G059700 Gossypium hirsutum HOM05D000678 ORTHO05D001709 1.6e-08 63.9 222 33.8
Actinidia15901 Actinidia chinensis HOM05D000678 ORTHO05D001709 2.1e-08 63.5 190 37.4
Carub.0005s0017 Capsella rubella HOM05D000678 ORTHO05D001709 2.7e-08 63.2 215 35.8
Ca_25468_v3 Cicer arietinum L. HOM05D000678 ORTHO05D001709 2.7e-08 63.2 210 34.8
FAN04G3032 Fragaria x ananassa HOM05D000678 ORTHO05D001709 2.7e-08 63.2 212 32.5
BcaB07g30754 Brassica carinata HOM05D000678 ORTHO05D001709 3.6e-08 62.8 120 45.8
Ciclev10010444m.g Citrus clementina HOM05D000678 ORTHO05D001709 3.6e-08 62.8 226 33.6
vmacro16431 Vaccinium macrocarpon HOM05D000678 ORTHO05D001709 3.6e-08 62.8 119 42.0
FAN18G0284 Fragaria x ananassa HOM05D000678 ORTHO05D001709 4.7e-08 62.4 211 32.7
CSS0030849 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D016859 6.1e-08 62.0 200 33.0
CARHR143730 Cardamine hirsuta HOM05D000678 ORTHO05D001709 6.1e-08 62.0 212 40.1
FvH4_5g16730 Fragaria vesca HOM05D000678 ORTHO05D001709 1.0e-07 61.2 211 32.2
CSS0016038 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D001709 6.7e-07 58.5 66 56.1
HanXRQChr08g0213231 Helianthus annuus HOM05D000678 ORTHO05D001709 6.7e-07 58.5 205 35.1
A09p23270 Brassica napus HOM05D000678 ORTHO05D001709 8.8e-07 58.2 212 35.4
BraA09t37929Z Brassica rapa HOM05D000678 ORTHO05D001709 8.8e-07 58.2 212 35.4
Dinv34792 Davidia involucrata HOM05D000678 ORTHO05D001709 8.8e-07 58.2 201 34.3
TAR374G1719 Trochodendron aralioides HOM05D000678 ORTHO05D001709 2.0e-06 57.0 174 35.1
Lj5A153T53 Lonicera japonica HOM05D000678 ORTHO05D001709 3.3e-06 56.2 121 39.7
PGR083G1471 Punica granatum HOM05D000678 ORTHO05D001709 3.3e-06 56.2 190 32.6


User provided reference genes

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