Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10549 Vaccinium macrocarpon HOM05D006290 ORTHO05D007734 1.1e-96 356.7 187 100.0
Dinv21105 Davidia involucrata HOM05D001580 ORTHO05D001517 8.3e-28 127.9 137 56.9
Actinidia16641 Actinidia chinensis HOM05D006290 ORTHO05D007734 9.2e-27 124.4 113 61.9
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 4.7e-23 112.1 83 77.1
QL01p043858 Quercus lobata HOM05D006290 ORTHO05D007734 8.1e-23 111.3 98 65.3
Thecc.02G357300 Theobroma cacao HOM05D006290 ORTHO05D007734 1.4e-22 110.5 160 45.6
CiPaw.15G083600 Carya illinoinensis HOM05D006290 ORTHO05D007734 4.0e-22 109.0 98 64.3
Haze_17464 Corylus avellana HOM05D006290 ORTHO05D007734 5.2e-22 108.6 124 58.1
Hma1.2p1_3293F.1_g334960 Hydrangea macrophylla HOM05D006290 ORTHO05D007734 2.6e-21 106.3 116 60.3
Cfa018610 Carpinus fangiana HOM05D006290 ORTHO05D007734 3.4e-21 105.9 98 66.3
Potri.010G126800 Populus trichocarpa HOM05D006290 ORTHO05D007734 1.3e-20 104.0 116 55.2
Sabra10G0096300 Salix brachista HOM05D006290 ORTHO05D007734 2.2e-20 103.2 98 61.2
Atru.chr11.1291 Acer truncatum HOM05D006290 ORTHO05D007734 2.9e-20 102.8 108 56.5
GSVIVG01011914001 Vitis vinifera HOM05D006290 ORTHO05D007734 4.9e-20 102.1 101 58.4
Potri.008G119300 Populus trichocarpa HOM05D006290 ORTHO05D007734 6.4e-20 101.7 103 58.3
Manes.14G100600 Manihot esculenta HOM05D006290 ORTHO05D007734 8.3e-20 101.3 116 55.2
Duzib251G0521 Durio zibethinus HOM05D006290 ORTHO05D007734 1.2e-18 97.4 106 55.7
FvH4_4g27620 Fragaria vesca HOM05D006290 ORTHO05D007734 1.7e-17 93.6 101 53.5
Medtr1g111150 Medicago truncatula HOM05D006290 ORTHO05D007734 5.1e-17 92.0 107 53.3
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 6.6e-17 91.7 88 61.4
CANSAT64G2445 Cannabis sativa HOM05D006290 ORTHO05D007734 8.6e-17 91.3 102 52.0
Oeu033294.1 Olea europaea HOM05D006290 ORTHO05D007734 1.1e-16 90.9 93 53.8
TPR.G26319 Trifolium pratense HOM05D006290 ORTHO05D007734 1.1e-16 90.9 100 54.0
Nitab4.5_0001914g0020 Nicotiana tabacum HOM05D006290 ORTHO05D007734 1.5e-16 90.5 89 55.1
Duzib268G1644 Durio zibethinus HOM05D006290 ORTHO05D007734 2.5e-16 89.7 100 53.0
TWI75G0318 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 2.5e-16 89.7 117 49.6
arahy.Tifrunner.gnm1.ann1.89WS3K Arachis hypogaea HOM05D006290 ORTHO05D007734 4.3e-16 89.0 99 55.6
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 4.3e-16 89.0 126 47.6
Peaxi162Scf00004g01813 Petunia axillaris HOM05D006290 ORTHO05D007734 4.3e-16 89.0 74 60.8
Lj5g0001389 Lotus japonicus HOM05D006290 ORTHO05D007734 5.6e-16 88.6 68 70.6
SGA_v2.0_scaffold124G33547 Striga asiatica HOM05D006290 ORTHO05D007734 5.6e-16 88.6 67 67.2
TWI79G1749 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 5.6e-16 88.6 96 57.3
Eucgr.G02333 Eucalyptus grandis HOM05D006290 ORTHO05D007734 7.3e-16 88.2 107 51.4
arahy.Tifrunner.gnm1.ann1.N6V5UD Arachis hypogaea HOM05D006290 ORTHO05D007734 9.5e-16 87.8 99 54.5
Ca_11183_v3 Cicer arietinum L. HOM05D006290 ORTHO05D007734 9.5e-16 87.8 69 68.1
Gorai.008G184100 Gossypium raimondii HOM05D006290 ORTHO05D007734 9.5e-16 87.8 105 49.5
Lj2g0005219 Lotus japonicus HOM05D006290 ORTHO05D007734 9.5e-16 87.8 94 55.3
MSTRG.13517 Avicennia marina HOM05D006290 ORTHO05D007734 1.2e-15 87.4 89 53.9
PGR119G1521 Punica granatum HOM05D006290 ORTHO05D007734 1.2e-15 87.4 94 53.2
Migut.L01076 Erythranthe guttata HOM05D006290 ORTHO05D007734 1.6e-15 87.0 66 72.7
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 3.6e-15 85.9 86 65.1
DCAR_007237 Daucus carota HOM05D006290 ORTHO05D007734 4.7e-15 85.5 89 58.4
Gohir.A13G054000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 4.7e-15 85.5 100 53.0
Gohir.D13G071500 Gossypium hirsutum HOM05D006290 ORTHO05D007734 4.7e-15 85.5 100 53.0
Gorai.013G081900 Gossypium raimondii HOM05D006290 ORTHO05D007734 4.7e-15 85.5 100 53.0
Lalb_Chr17g0342051 Lupinus albus HOM05D006290 ORTHO05D007734 4.7e-15 85.5 102 51.0
DCAR_023668 Daucus carota HOM05D000325 ORTHO05D002981 6.2e-15 85.1 60 75.0
Oeu020586.1 Olea europaea HOM05D006290 ORTHO05D007734 6.2e-15 85.1 97 53.6
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 6.2e-15 85.1 90 52.2
HanXRQChr16g0529651 Helianthus annuus HOM05D006290 ORTHO05D007734 8.1e-15 84.7 101 50.5
Glyma.01G082500 Glycine max HOM05D006290 ORTHO05D007734 1.1e-14 84.3 62 72.6
TPR.G38332 Trifolium pratense HOM05D006290 ORTHO05D007734 1.1e-14 84.3 97 53.6
Gohir.A12G168000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 1.8e-14 83.6 105 49.5
MSTRG.826 Avicennia marina HOM05D006290 ORTHO05D007734 2.3e-14 83.2 59 67.8
ECA234G1725 Erigeron canadensis HOM05D006290 ORTHO05D007734 2.3e-14 83.2 90 52.2
Gohir.D12G171600 Gossypium hirsutum HOM05D006290 ORTHO05D007734 3.1e-14 82.8 105 49.5
Medtr5g055200 Medicago truncatula HOM05D006290 ORTHO05D007734 3.1e-14 82.8 103 53.4
EL10Ac6g14437 Beta vulgaris HOM05D006290 ORTHO05D007734 5.2e-14 82.0 109 49.5
FAN12G1280 Fragaria x ananassa HOM05D006290 ORTHO05D007734 6.8e-14 81.6 125 42.4
Lalb_Chr21g0309011 Lupinus albus HOM05D006290 ORTHO05D007734 6.8e-14 81.6 76 65.8
Lalb_Chr10g0099941 Lupinus albus HOM05D006290 ORTHO05D007734 8.9e-14 81.3 96 53.1
MD13G1043600 Malus domestica HOM05D006290 ORTHO05D007734 1.2e-13 80.9 102 52.9
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.5e-13 80.5 132 41.7
Glyma.10G275300 Glycine max HOM05D006290 ORTHO05D007734 1.5e-13 80.5 75 64.0
Nn4g23807 Nelumbo nucifera HOM05D006290 ORTHO05D007734 1.5e-13 80.5 67 64.2
Phvul.007G026200 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 1.5e-13 80.5 75 64.0
Actinidia14876 Actinidia chinensis HOM05D006290 ORTHO05D007734 2.0e-13 80.1 59 66.1
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.6e-13 79.7 132 40.9
Glyma.08G263700 Glycine max HOM05D006290 ORTHO05D007734 2.6e-13 79.7 62 69.4
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 3.4e-13 79.3 66 66.7
A07p31920 Brassica napus HOM05D006290 ORTHO05D007734 5.8e-13 78.6 70 60.0
C02p25020 Brassica napus HOM05D006290 ORTHO05D007734 5.8e-13 78.6 63 61.9
C06p37490 Brassica napus HOM05D006290 ORTHO05D007734 5.8e-13 78.6 70 60.0
BolC2t08586H Brassica oleracea HOM05D006290 ORTHO05D007734 5.8e-13 78.6 63 61.9
BolC6t38851H Brassica oleracea HOM05D006290 ORTHO05D007734 5.8e-13 78.6 70 60.0
BraA07t30820Z Brassica rapa HOM05D006290 ORTHO05D007734 5.8e-13 78.6 70 60.0
THA.LOC104821947 Tarenaya hassleriana HOM05D006290 ORTHO05D007734 5.8e-13 78.6 60 73.3
Aa31sc179G60 Aethionema arabicum HOM05D006290 ORTHO05D007734 7.6e-13 78.2 62 71.0
Lsat_1_v5_gn_4_18480 Lactuca sativa HOM05D006290 ORTHO05D007734 7.6e-13 78.2 96 51.0
Phvul.003G034800 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 7.6e-13 78.2 92 52.2
Nitab4.5_0003285g0030 Nicotiana tabacum HOM05D006290 ORTHO05D007734 9.9e-13 77.8 112 44.6
Hund05756 Selenicereus undatus HOM05D006290 ORTHO05D007734 9.9e-13 77.8 94 48.9
BcaB05g24400 Brassica carinata HOM05D006290 ORTHO05D007734 1.3e-12 77.4 70 58.6
Glyma.20G114400 Glycine max HOM05D006290 ORTHO05D007734 1.3e-12 77.4 75 61.3
Manes.06G069950 Manihot esculenta HOM05D006290 ORTHO05D007734 1.3e-12 77.4 77 58.4
A02p15210 Brassica napus HOM05D006290 ORTHO05D007734 1.7e-12 77.0 58 65.5
BraA02t06584Z Brassica rapa HOM05D006290 ORTHO05D007734 1.7e-12 77.0 59 64.4
AL2G27490 Arabidopsis lyrata HOM05D006290 ORTHO05D007734 2.9e-12 76.3 61 68.9
ECA246G4651 Erigeron canadensis HOM05D006290 ORTHO05D007734 4.9e-12 75.5 88 50.0
AT1G68585 Arabidopsis thaliana HOM05D006290 ORTHO05D007734 6.4e-12 75.1 61 67.2
CsaV3_5G034200 Cucumis sativus L. HOM05D006290 ORTHO05D007734 8.4e-12 74.7 61 65.6
HanXRQChr17g0552191 Helianthus annuus HOM05D006290 ORTHO05D007734 8.4e-12 74.7 100 45.0
HanXRQChr17g0567961 Helianthus annuus HOM05D006290 ORTHO05D007734 8.4e-12 74.7 104 44.2
HanXRQChr15g0477181 Helianthus annuus HOM05D006290 ORTHO05D007734 1.1e-11 74.3 111 42.3
BcaC08g45955 Brassica carinata HOM05D006290 ORTHO05D007734 1.4e-11 73.9 70 60.0
Carub.0002s1512 Capsella rubella HOM05D006290 ORTHO05D007734 1.4e-11 73.9 61 67.2
BcaC03g14971 Brassica carinata HOM05D006290 ORTHO05D007734 1.9e-11 73.6 63 61.9
ClCG05G022830 Citrullus lanatus HOM05D006290 ORTHO05D007734 1.9e-11 73.6 60 65.0
CARHR061380 Cardamine hirsuta HOM05D006290 ORTHO05D007734 2.4e-11 73.2 71 63.4
Thhalv10019326m.g Eutrema salsugineum HOM05D006290 ORTHO05D007734 2.4e-11 73.2 63 61.9
SalBow8G3983 Salvia bowleyana HOM05D006290 ORTHO05D007734 2.4e-11 73.2 66 56.1
CiPaw.16G064000 Carya illinoinensis HOM05D006290 ORTHO05D007734 3.2e-11 72.8 57 66.7
Sc14g0007550 Simmondsia chinensis HOM05D006290 ORTHO05D007734 4.1e-11 72.4 110 41.8
Psat6g229000 Pisum sativum HOM05D006290 ORTHO05D007734 5.4e-11 72.0 85 56.5
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 5.4e-11 72.0 69 60.9
BcaB03g15431 Brassica carinata HOM05D006290 ORTHO05D007734 7.1e-11 71.6 70 58.6
Aqoxy3G00325 Aquilegia oxysepala HOM05D006290 ORTHO05D007734 1.2e-10 70.9 70 57.1
AUR62002889 Chenopodium quinoa HOM05D006290 ORTHO05D007734 2.1e-10 70.1 74 52.7
MBI12_g30235_MAGBIO Magnolia biondii HOM05D006290 ORTHO05D007734 2.1e-10 70.1 77 53.2
Sed0010442 Sechium edule HOM05D006290 ORTHO05D007734 1.0e-09 67.8 81 49.4
Sp5g23690 Schrenkiella parvula HOM05D006290 ORTHO05D007734 2.3e-09 66.6 70 57.1
Ciclev10033212m.g Citrus clementina HOM05D006290 ORTHO05D007734 5.1e-09 65.5 85 51.8
Solyc05g150121.1 Solanum lycopersicum HOM05D006290 ORTHO05D007734 6.6e-09 65.1 57 57.9
unitig_26.g10264 Utricularia gibba HOM05D000483 ORTHO05D000158 1.1e-08 64.3 58 53.4
SalBow8G5082 Salvia bowleyana HOM05D006290 ORTHO05D007734 3.3e-08 62.8 48 62.5
MELO3C012234.2 Cucumis melo HOM05D006290 ORTHO05D007734 4.3e-08 62.4 42 66.7
VMungo0720G2407 Vigna mungo HOM05D006290 ORTHO05D007734 9.6e-08 61.2 50 60.0
Cfa019791 Carpinus fangiana HOM05D006108 ORTHO05D007605 2.1e-07 60.1 66 57.6
MD06G1215000 Malus domestica HOM05D006290 ORTHO05D007734 2.8e-07 59.7 106 40.6
PGSC0003DMG400021769 Solanum tuberosum HOM05D006290 ORTHO05D007734 2.8e-07 59.7 76 50.0
Peaxi162Scf00634g00115 Petunia axillaris HOM05D006290 ORTHO05D007734 8.1e-07 58.2 53 60.4
Potri.015G053600 Populus trichocarpa HOM05D006290 ORTHO05D007734 1.4e-06 57.4 58 58.6
Solyc12g150113.1 Solanum lycopersicum HOM05D006290 ORTHO05D007734 1.4e-06 57.4 74 48.6
Sopen12g017530 Solanum pennellii HOM05D006290 ORTHO05D007734 1.4e-06 57.4 74 48.6
CAN.G257.59 Capsicum annuum HOM05D006290 ORTHO05D007734 2.4e-06 56.6 60 51.7
MD16G1044400 Malus domestica HOM05D006290 ORTHO05D007734 3.1e-06 56.2 40 67.5


User provided reference genes

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