Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 0.0e+00 1348.2 672 100.0
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 2.4e-255 885.6 695 69.9
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.9e-131 473.4 532 55.3
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 4.9e-131 472.6 532 55.3
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 1.8e-117 427.6 693 40.1
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 1.0e-112 411.8 686 38.8
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 1.4e-101 374.8 685 37.5
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.2e-98 363.2 625 40.6
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 2.7e-97 360.5 716 38.4
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 1.3e-94 351.7 669 37.4
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 4.8e-94 349.7 651 39.9
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 7.0e-93 345.9 667 37.6
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 2.7e-92 344.0 665 39.1
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 2.2e-91 340.9 667 35.8
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.5e-90 338.2 679 35.2
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 1.6e-89 334.7 697 34.1
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 4.7e-89 333.2 676 36.8
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 6.8e-88 329.3 652 38.0
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 1.2e-87 328.6 497 43.3
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 3.4e-87 327.0 506 42.5
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.2e-86 324.3 511 42.1
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 6.3e-86 322.8 512 42.6
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 1.8e-85 321.2 531 40.5
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 6.5e-83 312.8 672 35.6
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 1.5e-82 311.6 503 41.6
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 2.8e-81 307.4 510 42.7
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.4e-80 305.1 502 40.6
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 1.8e-80 304.7 511 41.5
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 1.5e-79 301.6 703 34.0
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 2.0e-79 301.2 774 32.7
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.4e-79 300.4 241 63.9
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 9.8e-79 298.9 511 41.1
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 3.7e-78 297.0 392 43.9
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 4.9e-78 296.6 670 35.8
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 4.1e-77 293.5 243 63.0
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 3.0e-72 277.3 652 33.0
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 5.2e-72 276.6 671 31.7
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 4.4e-71 273.5 498 39.4
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.7e-70 271.6 493 38.7
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 2.9e-70 270.8 643 34.4
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 3.7e-70 270.4 530 36.2
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 6.4e-70 269.6 506 38.5
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 1.4e-69 268.5 655 33.1
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 5.4e-69 266.5 486 39.1
Actinidia27213 Actinidia chinensis HOM05D004942 ORTHO05D005687 9.2e-69 265.8 285 55.1
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 9.2e-69 265.8 511 35.4
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 3.5e-68 263.8 664 32.5
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 1.3e-67 261.9 495 37.0
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 1.1e-66 258.8 465 37.2
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 1.1e-66 258.8 663 32.4
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 1.9e-66 258.1 493 37.7
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 7.3e-66 256.1 516 37.0
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 9.5e-66 255.8 515 36.1
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 2.8e-65 254.2 536 35.1
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 3.6e-65 253.8 480 37.5
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 5.2e-64 250.0 519 36.2
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 8.9e-64 249.2 553 36.5
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 3.4e-63 247.3 642 31.6
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 5.8e-63 246.5 505 34.9
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 1.7e-62 245.0 532 36.1
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.1e-61 242.3 495 35.2
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 1.1e-61 242.3 286 47.9
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 1.9e-61 241.5 489 38.0
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 7.0e-61 239.6 286 47.9
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 2.1e-60 238.0 494 34.0
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 3.5e-60 237.3 499 36.1
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 4.6e-60 236.9 224 53.6
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 7.8e-60 236.1 497 38.4
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 1.0e-59 235.7 338 48.8
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 5.0e-59 233.4 506 35.0
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 8.6e-59 232.6 548 37.8
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 1.5e-58 231.9 500 34.4
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 1.9e-58 231.5 566 34.3
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 4.3e-58 230.3 488 35.9
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 4.3e-58 230.3 681 30.0
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 7.3e-58 229.6 482 36.7
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 7.3e-58 229.6 510 35.5
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 7.3e-58 229.6 510 35.5
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 1.2e-57 228.8 507 36.1
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 3.6e-57 227.3 487 35.3
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 4.7e-57 226.9 535 36.1
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 2.3e-56 224.6 508 33.9
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 5.8e-55 219.9 507 34.9
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 4.9e-54 216.9 540 33.9
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 8.3e-54 216.1 553 32.9
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 2.4e-53 214.5 557 33.8
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 2.7e-52 211.1 519 34.1
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 1.3e-51 208.8 478 34.5
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 6.6e-51 206.5 507 33.5
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.5e-50 205.3 285 46.3
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 9.5e-50 202.6 514 33.1
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 4.7e-49 200.3 673 29.4
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.8e-48 198.4 480 33.1
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 4.4e-47 193.7 564 32.1
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.2e-44 185.7 106 71.7
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 2.7e-44 184.5 520 32.7
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 4.6e-44 183.7 110 75.5
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 9.6e-42 176.0 113 67.3
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 6.9e-40 169.9 446 33.0
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 7.1e-37 159.8 605 30.2
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 3.0e-35 154.5 546 30.2
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 5.1e-35 153.7 604 28.1
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 1.5e-34 152.1 163 46.0
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 1.9e-34 151.8 227 40.1
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.6e-33 148.7 90 74.4
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 1.1e-32 146.0 478 27.6
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 5.4e-29 133.7 169 43.2
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 3.5e-28 131.0 235 36.6
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 4.6e-28 130.6 76 75.0
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.3e-27 129.0 87 64.4
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 4.8e-25 120.6 667 24.9
Actinidia16149 Actinidia chinensis HOM05D057958 ORTHO05D005687 1.4e-21 109.0 161 46.0
Actinidia26534 Actinidia chinensis HOM05D057958 ORTHO05D005687 1.4e-21 109.0 161 46.0
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 6.7e-19 100.1 83 56.6
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 3.1e-16 91.3 246 29.7
TAR629G0168 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.2e-15 89.4 239 34.3
Oeu028721.1 Olea europaea HOM05D004942 ORTHO05D005687 9.3e-13 79.7 104 46.2
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 5.1e-11 73.9 302 28.8
MCO07G070 Micromonas commoda HOM05D004942 ORTHO05D005687 2.4e-08 65.1 81 37.0
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 5.3e-08 63.9 91 47.3


User provided reference genes

Program Settings