Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 4.7e-129 464.5 234 100.0
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.5e-74 282.7 242 65.3
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.4e-69 266.9 241 62.7
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 1.6e-60 236.9 146 80.1
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 3.9e-59 232.3 235 55.7
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.6e-57 226.9 239 54.0
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 3.1e-56 222.6 238 51.3
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 4.5e-55 218.8 238 52.9
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 7.6e-55 218.0 241 49.8
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 1.0e-54 217.6 235 53.2
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 9.3e-53 211.1 236 51.3
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 9.3e-53 211.1 237 53.6
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.2e-52 210.7 235 52.8
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.2e-52 210.7 235 52.8
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 7.9e-52 208.0 241 50.2
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.0e-51 207.6 241 49.8
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.3e-51 206.5 241 50.6
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.0e-51 206.1 235 52.3
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.0e-51 206.1 236 48.3
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 5.1e-51 205.3 242 50.4
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 4.3e-50 202.2 232 51.7
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 5.7e-50 201.8 241 49.8
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.4e-48 197.2 240 50.4
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 3.1e-48 196.1 245 46.5
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.5e-47 193.7 239 46.4
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 1.9e-45 186.8 232 47.4
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 1.6e-44 183.7 233 45.5
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 2.7e-44 183.0 238 46.6
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 2.7e-44 183.0 241 48.1
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 1.0e-43 181.0 211 47.4
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 3.9e-43 179.1 237 47.7
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 6.7e-43 178.3 184 49.5
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.0e-42 176.8 122 63.1
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 7.4e-42 174.9 171 52.0
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 1.4e-40 170.6 248 44.0
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 6.7e-35 151.8 234 41.9
Haze_16205 Corylus avellana HOM05D005772 ORTHO05D006468 2.0e-31 140.2 195 47.2
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 3.8e-30 136.0 178 48.9
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 3.6e-28 129.4 305 32.1
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 1.8e-27 127.1 232 34.5
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 5.2e-27 125.6 220 35.9
Duzib192G0394 Durio zibethinus HOM05D005772 ORTHO05D006468 2.6e-26 123.2 132 50.0
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 3.3e-26 122.9 144 45.1
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 5.7e-26 122.1 133 45.1
Dinv20324 Davidia involucrata HOM05D005772 ORTHO05D006468 2.8e-25 119.8 239 42.3
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 8.2e-25 118.2 138 44.9
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 8.2e-25 118.2 138 44.9
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 8.2e-25 118.2 138 44.9
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 5.3e-24 115.5 196 37.8
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 2.7e-23 113.2 215 35.3
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 1.0e-22 111.3 216 34.3
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.0e-22 111.3 193 37.3
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.2e-22 110.2 183 38.3
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.8e-22 109.4 270 33.0
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 1.9e-21 107.1 155 46.5
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.5e-21 106.7 235 31.9
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 4.2e-21 105.9 180 35.6
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 2.7e-20 103.2 233 33.0
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.6e-20 102.8 106 48.1
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 3.6e-20 102.8 203 39.4
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 8.0e-20 101.7 180 35.0
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 8.0e-20 101.7 209 34.0
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.8e-19 100.5 233 33.0
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 3.0e-19 99.8 175 37.7
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 4.0e-19 99.4 171 35.1
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 5.2e-19 99.0 130 42.3
Atru.chr1.2602 Acer truncatum HOM05D005772 ORTHO05D006468 6.8e-19 98.6 167 44.3
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.8e-19 98.2 245 34.7
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 1.5e-18 97.4 202 32.7
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 2.6e-18 96.7 133 41.4
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.4e-18 96.3 209 33.0
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 5.7e-18 95.5 140 40.7
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 5.7e-18 95.5 124 40.3
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 9.8e-18 94.7 241 31.1
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 9.8e-18 94.7 186 34.4
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 9.8e-18 94.7 185 35.1
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.3e-17 94.4 247 32.0
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.3e-17 94.4 217 29.0
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 1.7e-17 94.0 180 33.9
Eucgr.A00749 Eucalyptus grandis HOM05D005772 ORTHO05D006468 1.7e-17 94.0 171 37.4
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 3.7e-17 92.8 117 42.7
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 2.4e-16 90.1 216 29.2
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 2.4e-16 90.1 174 33.9
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.4e-16 90.1 189 34.4
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 3.1e-16 89.7 123 37.4
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 4.1e-16 89.4 241 30.7
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.6e-15 87.4 197 31.0
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 1.6e-15 87.4 135 35.6
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 3.5e-15 86.3 209 30.6
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 4.5e-15 85.9 249 27.3
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 4.5e-15 85.9 245 31.0
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 5.9e-15 85.5 234 29.9
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 5.9e-15 85.5 222 32.9
QL06p047014 Quercus lobata HOM05D001071 ORTHO05D006468 7.7e-15 85.1 139 42.4
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 2.3e-14 83.6 253 29.6
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.9e-14 83.2 199 31.7
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 5.0e-14 82.4 118 35.6
MD04G1024400 Malus domestica HOM05D005772 ORTHO05D006468 6.5e-14 82.0 107 43.0
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 3.2e-13 79.7 253 28.5
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 4.2e-13 79.3 247 30.4
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 3.6e-12 76.3 118 33.9
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 3.6e-12 76.3 251 27.5
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 4.7e-12 75.9 200 27.0
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 4.7e-12 75.9 216 27.3
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.0e-11 74.7 118 32.2
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 3.0e-11 73.2 119 31.1
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 3.0e-11 73.2 219 27.9
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 5.2e-11 72.4 185 31.9
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 3.4e-10 69.7 103 32.0
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 3.4e-10 69.7 103 32.0
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.4e-10 69.7 234 29.1
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 9.8e-10 68.2 208 30.3
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.3e-09 67.8 118 30.5
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 6.3e-09 65.5 185 23.8
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 3.1e-08 63.2 82 39.0
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 4.1e-08 62.8 140 35.7
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 4.1e-08 62.8 195 27.7
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 7.0e-08 62.0 167 27.5
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 9.2e-08 61.6 209 25.4
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.6e-07 60.8 92 35.9
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 4.5e-07 59.3 236 26.3
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 5.9e-07 58.9 234 26.1
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 1.0e-06 58.2 108 33.3
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 5.0e-06 55.8 156 28.2
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 8.6e-06 55.1 81 29.6
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 8.6e-06 55.1 81 29.6


User provided reference genes

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