Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 0.0e+00 1112.4 542 100.0
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 6.3e-193 677.9 519 68.8
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 4.7e-156 555.4 515 57.5
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 2.3e-123 446.8 468 53.4
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 4.0e-115 419.5 517 46.0
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 8.9e-115 418.3 521 46.4
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 5.4e-112 409.1 508 45.9
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 3.9e-110 402.9 514 44.9
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 5.1e-110 402.5 522 44.8
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 3.1e-107 393.3 509 45.4
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 2.2e-105 387.1 515 43.9
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 7.1e-104 382.1 514 43.4
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 2.1e-103 380.6 514 42.4
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.5e-103 379.8 491 45.0
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.0e-102 378.3 491 44.8
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 1.0e-102 378.3 514 42.6
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 3.9e-102 376.3 514 42.4
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 2.5e-101 373.6 517 42.7
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.3e-101 373.2 488 43.4
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 4.3e-101 372.9 520 43.1
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 5.6e-101 372.5 508 42.5
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 2.1e-100 370.5 492 44.1
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 1.4e-99 367.9 492 43.9
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 9.0e-99 365.2 548 40.5
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 1.2e-98 364.8 514 41.6
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 2.6e-98 363.6 505 43.8
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 5.8e-98 362.5 514 42.2
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 1.3e-97 361.3 507 41.4
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 1.3e-97 361.3 513 43.9
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 1.7e-97 360.9 505 43.6
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.2e-97 360.5 514 41.4
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 2.2e-97 360.5 491 42.4
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 4.2e-96 356.3 325 58.5
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 4.6e-95 352.8 491 41.8
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.0e-94 351.7 514 41.2
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 2.5e-93 347.1 437 45.3
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 5.6e-93 345.9 507 41.6
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 7.4e-93 345.5 520 40.6
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 2.1e-92 344.0 510 41.8
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 1.1e-91 341.7 518 40.0
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 1.8e-91 340.9 512 40.4
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 4.0e-91 339.7 483 42.9
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.5e-90 337.8 507 39.4
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 2.6e-90 337.0 507 38.9
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 7.6e-90 335.5 508 40.0
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 1.1e-88 331.6 510 40.8
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 9.3e-88 328.6 498 42.6
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 2.1e-87 327.4 483 40.8
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.8e-86 324.3 487 40.5
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 3.9e-86 323.2 513 39.4
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 3.9e-86 323.2 510 40.0
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.9e-85 320.9 513 39.0
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 2.5e-85 320.5 523 39.4
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 1.6e-84 317.8 476 41.4
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 2.8e-84 317.0 524 40.3
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 6.2e-84 315.8 526 38.4
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 1.4e-83 314.7 518 39.4
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 6.9e-83 312.4 515 38.8
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 2.0e-82 310.8 507 40.2
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 5.8e-82 309.3 506 37.9
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 7.6e-82 308.9 476 41.2
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 1.7e-81 307.8 515 37.9
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.4e-80 304.7 508 38.0
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.2e-79 301.6 507 39.4
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 1.2e-79 301.6 490 38.6
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 1.2e-79 301.6 515 37.7
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 1.6e-79 301.2 505 40.2
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 2.1e-79 300.8 501 39.3
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 2.1e-79 300.8 514 37.5
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 3.5e-79 300.1 507 38.7
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 4.6e-79 299.7 538 37.4
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 6.0e-79 299.3 517 38.1
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 7.9e-79 298.9 514 36.8
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 1.0e-78 298.5 512 36.9
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 3.0e-78 297.0 485 39.4
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 3.0e-78 297.0 485 39.4
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 5.1e-78 296.2 521 36.7
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 5.1e-78 296.2 473 39.7
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 1.5e-77 294.7 532 37.0
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 1.5e-77 294.7 521 36.5
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 1.9e-77 294.3 512 37.5
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 2.5e-77 293.9 460 39.1
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 4.3e-77 293.1 468 40.0
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 4.3e-77 293.1 497 36.6
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 5.7e-77 292.7 511 37.8
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 2.1e-76 290.8 497 38.8
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 2.4e-75 287.3 512 36.3
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 2.6e-74 283.9 470 38.5
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 2.9e-73 280.4 466 39.9
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 5.5e-72 276.2 501 37.7
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 1.0e-70 271.9 518 35.7
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.1e-69 268.5 492 36.6
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 3.3e-69 266.9 508 34.8
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 3.3e-69 266.9 267 53.9
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 5.7e-69 266.2 419 37.9
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 3.7e-68 263.5 507 35.7
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 3.7e-68 263.5 323 46.4
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 3.7e-68 263.5 447 37.6
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 1.8e-67 261.2 308 51.9
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 2.4e-67 260.8 246 59.3
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 4.1e-67 260.0 459 37.5
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 2.9e-65 253.8 514 35.6
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 1.4e-64 251.5 490 38.0
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.1e-62 243.0 251 52.6
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 1.7e-60 238.0 369 38.8
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 1.3e-57 228.4 489 32.3
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 5.0e-57 226.5 572 31.8
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 4.2e-56 223.4 473 34.0
Aa31LG1G4780 Aethionema arabicum HOM05D004964 ORTHO05D005918 1.5e-53 214.9 267 49.1
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 7.0e-51 206.1 317 41.3
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 2.1e-47 194.5 236 49.6
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 2.8e-44 184.1 221 48.9
C07p27190 Brassica napus HOM05D004964 ORTHO05D005918 2.1e-39 167.9 246 42.7
BolC7t43246H Brassica oleracea HOM05D004964 ORTHO05D005918 2.1e-39 167.9 246 42.7
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.8e-38 164.9 325 34.8
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 4.0e-38 163.7 236 40.7
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 5.7e-37 159.8 531 27.9
Os01g0684800 Oryza sativa ssp. japonica HOM05D004964 ORTHO05D005918 7.5e-37 159.5 204 44.1
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 1.1e-35 155.6 247 38.1
CDE04G2937 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 4.1e-35 153.7 189 49.7
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 1.0e-33 149.1 413 29.8
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 1.7e-33 148.3 408 29.9
SGA_v2.0_scaffold26G11248 Striga asiatica HOM05D004964 ORTHO05D005918 5.0e-33 146.7 220 42.3
MD12G1248600 Malus domestica HOM05D004964 ORTHO05D005918 7.2e-32 142.9 161 52.8
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 2.1e-31 141.4 131 52.7
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 4.7e-31 140.2 439 29.2
TPR.G15846 Trifolium pratense HOM05D004964 ORTHO05D005918 1.4e-30 138.7 169 45.6
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 2.0e-29 134.8 354 30.2
SMO146G0189 Selaginella moellendorffii HOM05D004964 ORTHO05D005918 2.6e-29 134.4 308 36.4
Haze_04422 Corylus avellana HOM05D004964 ORTHO05D005918 7.5e-29 132.9 201 43.3
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 8.6e-25 119.4 264 30.7
QL03p030376 Quercus lobata HOM05D004964 ORTHO05D005918 9.5e-24 115.9 209 35.4
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 1.6e-23 115.2 354 28.0
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 8.9e-22 109.4 141 41.8
Hund12147 Selenicereus undatus HOM05D004964 ORTHO05D005918 1.2e-21 109.0 169 40.8
SEGI_14565 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 8.3e-20 102.8 171 39.2
Lsat_1_v5_gn_6_73440 Lactuca sativa HOM05D001771 ORTHO05D001876 5.4e-19 100.1 142 43.0
RcHm_v2.0_Chr2g0095691 Rosa chinensis HOM05D004964 ORTHO05D005918 1.6e-15 88.6 82 56.1
BolC9t55572H Brassica oleracea HOM05D004964 ORTHO05D005918 3.6e-15 87.4 119 46.2
TPR.G19618 Trifolium pratense HOM05D004964 ORTHO05D005918 1.8e-14 85.1 94 44.7
Aa31LG1G4790 Aethionema arabicum HOM05D004964 ORTHO05D005918 5.2e-14 83.6 209 28.7
CBR_g718 Chara braunii HOM05D004964 ORTHO05D005918 8.9e-14 82.8 136 34.6
arahy.Tifrunner.gnm1.ann1.A28SEL Arachis hypogaea HOM05D000231 ORTHO05D005918 1.5e-13 82.0 97 46.4
SEGI_33500 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 3.7e-12 77.4 106 44.3
Psat7g249360 Pisum sativum HOM05D001947 ORTHO05D021361 4.1e-11 73.9 56 66.1
Oeu012237.1 Olea europaea HOM05D004964 ORTHO05D005918 2.0e-10 71.6 101 37.6
MD12G1248100 Malus domestica HOM05D004964 ORTHO05D005918 2.3e-09 68.2 84 50.0
BolC9t55571H Brassica oleracea HOM05D004964 ORTHO05D005918 5.6e-08 63.5 79 40.5
Lsat_1_v5_gn_6_39820 Lactuca sativa HOM05D004964 ORTHO05D005918 1.6e-07 62.0 45 64.4
CDE04G0768 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 8.1e-07 59.7 115 30.4


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