Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 0.0e+00 1394.4 753 100.0
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 3.8e-273 944.9 729 72.2
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 4.3e-216 755.4 758 59.6
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 3.5e-194 682.6 677 60.1
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 6.1e-154 548.9 536 60.6
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 1.2e-146 524.6 762 46.1
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 5.7e-128 462.6 704 45.2
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 1.1e-126 458.4 717 45.5
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 7.0e-126 455.7 760 42.4
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 7.7e-125 452.2 616 46.4
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 1.7e-124 451.1 757 44.4
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 1.7e-124 451.1 759 42.8
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 2.5e-123 447.2 746 43.0
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 9.5e-123 445.3 718 43.6
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 4.9e-119 433.0 757 41.5
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.4e-119 432.6 727 43.9
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 8.3e-119 432.2 697 44.3
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 8.3e-119 432.2 754 43.2
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.4e-118 431.4 713 43.9
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 1.8e-118 431.0 707 42.9
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 5.4e-118 429.5 711 43.7
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 5.4e-118 429.5 740 42.3
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 7.0e-118 429.1 718 42.8
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 7.0e-118 429.1 695 44.3
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 3.5e-117 426.8 693 43.7
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 4.6e-117 426.4 742 42.5
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 1.0e-116 425.2 695 44.0
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 8.6e-116 422.2 766 42.2
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 2.5e-115 420.6 555 48.8
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 3.3e-115 420.2 718 42.8
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 8.0e-114 415.6 723 42.2
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 8.9e-113 412.1 715 42.9
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 1.3e-111 408.3 750 42.3
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 4.9e-111 406.4 710 43.1
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 8.3e-111 405.6 750 40.3
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 8.3e-111 405.6 750 40.4
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 7.0e-110 402.5 731 40.6
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 2.7e-109 400.6 800 38.9
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 4.6e-109 399.8 444 53.2
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 7.3e-107 392.5 664 43.4
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 1.8e-105 387.9 680 42.2
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 4.0e-105 386.7 724 40.9
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 6.8e-105 386.0 695 42.4
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 3.4e-104 383.6 692 39.9
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 1.3e-103 381.7 653 41.2
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 6.4e-103 379.4 791 39.2
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 3.2e-102 377.1 738 40.1
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 1.6e-101 374.8 689 40.6
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 2.1e-101 374.4 696 41.4
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 1.1e-99 368.6 694 40.2
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 2.1e-98 364.4 720 38.9
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 1.8e-97 361.3 394 52.8
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 3.1e-97 360.5 458 51.1
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 6.8e-97 359.4 684 38.7
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 5.8e-96 356.3 568 42.8
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 9.9e-96 355.5 523 45.3
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 1.3e-95 355.1 680 39.6
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 2.9e-95 354.0 679 39.8
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 6.4e-95 352.8 691 40.1
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 8.4e-95 352.4 757 36.3
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 1.9e-94 351.3 696 38.2
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.3e-92 345.1 704 38.9
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 1.3e-92 345.1 662 38.7
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.7e-92 344.7 704 38.8
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 1.7e-92 344.7 626 41.9
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 3.0e-92 344.0 688 38.1
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 6.6e-92 342.8 677 37.4
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 7.3e-91 339.3 638 40.3
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 1.2e-90 338.6 725 37.8
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 3.1e-89 334.0 485 43.5
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 8.9e-89 332.4 727 38.2
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 9.9e-88 328.9 490 46.1
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 5.4e-86 323.2 737 37.7
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 7.8e-85 319.3 531 42.9
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 1.7e-84 318.2 698 35.2
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 1.9e-83 314.7 691 36.2
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 1.9e-83 314.7 691 36.2
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 9.6e-83 312.4 405 48.9
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 3.4e-80 303.9 687 35.2
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 9.9e-80 302.4 695 36.4
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 4.3e-75 287.0 505 41.2
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 7.4e-75 286.2 705 34.9
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 9.6e-75 285.8 670 35.5
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 1.6e-74 285.0 710 36.1
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 1.8e-73 281.6 681 36.3
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 2.9e-71 274.2 877 32.7
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 1.8e-65 255.0 708 34.2
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 8.4e-63 246.1 389 44.2
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 6.0e-61 240.0 441 42.2
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 2.5e-59 234.6 326 45.7
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 3.1e-57 227.6 528 36.4
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 3.9e-52 210.7 336 44.9
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 1.5e-51 208.8 520 34.2
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 4.3e-51 207.2 381 40.2
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 2.6e-48 198.0 664 29.2
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 5.9e-48 196.8 570 30.2
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 1.1e-46 192.6 365 39.5
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 1.4e-46 192.2 298 41.9
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 2.7e-45 188.0 622 30.5
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 6.7e-44 183.3 362 35.9
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 7.4e-43 179.9 265 43.8
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 2.4e-41 174.9 415 37.1
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 3.1e-41 174.5 281 44.1
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 3.4e-40 171.0 265 43.8
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 6.5e-39 166.8 385 35.6
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 3.2e-38 164.5 359 37.3
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 3.9e-36 157.5 185 53.5
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 4.4e-35 154.1 776 26.3
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 8.8e-28 129.8 297 32.3
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 6.5e-23 113.6 112 58.9
Dinv03778 Davidia involucrata HOM05D006063 ORTHO05D045100 6.5e-23 113.6 256 39.1
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 7.2e-22 110.2 150 47.3
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 2.6e-19 101.7 80 63.8
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 2.2e-18 98.6 309 32.0
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 3.7e-18 97.8 264 36.7
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 1.9e-14 85.5 119 42.0
Hma1.2p1_0153F.1_g067860 Hydrangea macrophylla HOM05D006063 ORTHO05D045100 1.0e-12 79.7 212 35.8
MBI18_g46978_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.0e-12 79.7 239 34.7
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 7.5e-11 73.6 118 45.8
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 7.8e-08 63.5 40 80.0
DCAR_005530 Daucus carota HOM05D006063 ORTHO05D000023 1.3e-07 62.8 224 32.1
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 1.7e-07 62.4 48 66.7
TPR.G14651 Trifolium pratense HOM05D006063 ORTHO05D000023 2.5e-06 58.5 220 29.1


User provided reference genes

Program Settings