Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 1.6e-191 672.5 334 100.0
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.0e-133 479.6 339 71.7
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.0e-133 479.6 339 71.7
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 8.4e-132 474.2 339 71.4
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 5.0e-124 448.4 339 66.7
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 1.9e-123 446.4 340 67.1
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 2.5e-123 446.0 340 67.1
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 5.5e-123 444.9 344 67.4
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 4.6e-122 441.8 339 66.4
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 8.8e-121 437.6 340 66.2
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 1.1e-120 437.2 341 66.0
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 2.5e-120 436.0 346 64.5
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 3.3e-120 435.6 330 67.9
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 5.7e-120 434.9 344 65.4
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 7.4e-120 434.5 347 64.6
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 1.3e-119 433.7 345 64.6
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 2.8e-119 432.6 340 65.0
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 3.7e-119 432.2 343 63.0
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 3.7e-119 432.2 350 61.4
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 4.8e-119 431.8 343 64.7
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 8.2e-119 431.0 340 65.0
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 1.4e-118 430.3 346 63.3
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 1.4e-118 430.3 346 64.7
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 1.4e-118 430.3 350 62.0
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 2.4e-118 429.5 340 65.0
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 4.1e-118 428.7 344 63.4
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 5.3e-118 428.3 340 64.1
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 6.9e-118 427.9 340 64.7
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.5e-117 426.8 343 63.0
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 1.5e-117 426.8 350 63.4
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 2.0e-117 426.4 340 64.1
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 4.5e-117 425.2 339 63.4
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 2.2e-116 422.9 350 62.3
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 2.9e-116 422.5 338 62.1
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 2.9e-116 422.5 340 62.9
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 2.9e-116 422.5 350 60.9
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 2.9e-116 422.5 348 63.5
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 3.8e-116 422.2 343 62.1
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 1.9e-115 419.9 338 64.5
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 1.9e-115 419.9 348 63.5
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.6e-114 416.8 347 62.8
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 2.7e-114 416.0 347 62.2
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 3.6e-114 415.6 350 59.7
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 3.6e-114 415.6 350 60.6
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 6.1e-114 414.8 350 62.6
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 1.0e-113 414.1 347 62.0
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.4e-113 413.7 343 61.5
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 3.0e-113 412.5 347 61.4
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 3.9e-113 412.1 400 57.5
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 6.7e-113 411.4 350 60.0
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.1e-112 410.6 343 61.2
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 1.1e-112 410.6 344 61.6
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 1.5e-112 410.2 396 53.8
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 2.0e-112 409.8 347 61.4
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 3.3e-112 409.1 344 60.8
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 4.4e-112 408.7 351 60.4
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 1.7e-111 406.8 341 61.3
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 1.7e-111 406.8 345 60.9
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 2.2e-111 406.4 330 64.2
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 2.2e-111 406.4 339 59.6
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.8e-111 406.0 350 59.7
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 3.7e-111 405.6 341 61.0
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 4.8e-111 405.2 340 60.6
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 6.3e-111 404.8 341 61.0
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 8.2e-111 404.4 347 60.2
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 1.1e-110 404.1 340 58.8
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 1.4e-110 403.7 341 61.0
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 2.4e-110 402.9 341 61.0
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 3.1e-110 402.5 347 60.8
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 5.3e-110 401.7 347 60.5
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 7.0e-110 401.4 359 58.2
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 7.0e-110 401.4 339 58.4
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 1.6e-109 400.2 339 58.7
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 2.0e-109 399.8 344 61.0
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 2.6e-109 399.4 347 59.4
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 5.9e-109 398.3 351 58.4
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 5.9e-109 398.3 347 58.8
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 5.9e-109 398.3 339 58.7
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 7.7e-109 397.9 348 59.2
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 1.3e-108 397.1 340 59.1
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 1.7e-108 396.7 340 60.0
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 2.9e-108 396.0 344 60.5
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 2.9e-108 396.0 341 60.4
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 2.9e-108 396.0 341 59.8
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 3.8e-108 395.6 319 64.6
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.8e-108 395.6 341 60.1
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 2.5e-107 392.9 351 58.1
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 2.5e-107 392.9 351 58.1
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 2.1e-106 389.8 347 60.8
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 2.7e-106 389.4 345 59.7
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 4.0e-105 385.6 352 56.8
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 7.5e-104 381.3 346 62.4
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 7.5e-104 381.3 358 56.7
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 4.8e-103 378.6 283 68.6
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 1.2e-101 374.0 315 59.7
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 5.9e-101 371.7 331 58.9
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 1.1e-99 367.5 342 54.7
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 1.9e-99 366.7 339 57.8
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 3.2e-99 365.9 340 56.5
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.7e-95 353.6 279 65.9
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.7e-95 352.4 323 55.7
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 7.7e-93 344.7 302 59.9
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 3.2e-91 339.3 282 63.1
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 4.3e-83 312.4 280 57.5
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 1.0e-81 307.8 342 50.3
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 2.9e-79 299.7 333 48.0
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 1.1e-78 297.7 209 71.8
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 5.4e-78 295.4 210 69.5
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 4.7e-74 282.3 334 46.4
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 9.8e-72 274.6 329 47.4
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 3.9e-68 262.7 343 44.3
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 4.3e-67 259.2 147 83.7
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.5e-64 250.8 145 83.4
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 1.3e-55 221.1 329 39.2
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 2.5e-43 180.3 357 37.3
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 1.6e-42 177.6 218 44.5
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 4.8e-42 176.0 328 34.5
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.1e-41 174.9 153 60.8
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 5.3e-41 172.6 199 46.2
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.4e-38 164.5 185 54.1
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 3.5e-37 159.8 149 57.7
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 4.9e-31 139.4 99 67.7
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 4.6e-29 132.9 95 67.4
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 2.5e-27 127.1 95 65.3
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.3e-20 104.0 66 71.2
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.8e-18 97.1 64 68.8
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.4e-17 94.7 59 71.2
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 1.0e-12 78.6 61 63.9
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.2e-10 70.9 71 47.9
DCAR_021657 Daucus carota HOM05D000572 ORTHO05D002399 2.2e-07 60.8 31 87.1


User provided reference genes

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