Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 6.5e-105 384.0 190 100.0
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 8.3e-92 340.5 191 85.9
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 2.1e-79 299.3 185 75.7
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 6.8e-78 294.3 187 77.5
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.2e-77 293.5 190 73.7
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.6e-74 283.1 187 71.7
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 7.8e-74 280.8 190 71.6
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 1.3e-73 280.0 185 74.1
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 3.0e-73 278.9 191 69.1
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 3.0e-73 278.9 175 76.6
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 6.6e-73 277.7 169 77.5
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.5e-72 276.6 190 72.6
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.5e-72 275.8 178 75.3
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 7.3e-72 274.2 169 76.9
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 7.3e-72 274.2 169 76.3
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.6e-71 273.1 181 72.9
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.6e-71 273.1 187 69.5
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 4.7e-71 271.6 191 71.2
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.4e-70 270.0 187 69.5
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.3e-70 269.2 189 67.7
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 3.1e-70 268.9 187 70.6
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 5.2e-70 268.1 194 67.5
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 6.8e-70 267.7 183 72.7
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 2.0e-69 266.2 183 71.6
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 3.4e-69 265.4 219 61.6
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 4.4e-69 265.0 177 68.4
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 4.4e-69 265.0 186 68.3
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 5.8e-69 264.6 190 68.9
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 9.9e-69 263.8 184 70.1
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 6.4e-68 261.2 187 69.0
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 1.4e-67 260.0 175 69.7
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 2.4e-67 259.2 179 69.8
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.6e-66 256.5 171 71.3
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 1.6e-66 256.5 173 71.1
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 2.1e-66 256.1 187 67.4
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 2.1e-66 256.1 177 69.5
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 6.0e-66 254.6 181 70.2
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 7.8e-66 254.2 186 68.3
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 3.9e-65 251.9 174 69.0
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 3.9e-65 251.9 185 69.2
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 3.9e-65 251.9 182 71.4
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 5.1e-65 251.5 178 68.0
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 6.6e-65 251.1 181 68.0
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 6.6e-65 251.1 199 66.8
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 8.6e-65 250.8 183 67.2
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 1.1e-64 250.4 173 70.5
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.5e-64 250.0 178 69.1
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 2.5e-64 249.2 183 66.7
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 2.5e-64 249.2 183 66.7
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 2.5e-64 249.2 183 66.7
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 2.5e-64 249.2 255 53.7
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 4.3e-64 248.4 179 67.0
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 5.6e-64 248.1 175 69.1
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 7.3e-64 247.7 177 68.4
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 7.3e-64 247.7 181 68.0
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 7.3e-64 247.7 187 64.2
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 9.6e-64 247.3 181 66.9
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.6e-63 246.5 177 66.1
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 1.6e-63 246.5 173 65.9
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 2.1e-63 246.1 187 67.9
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 2.8e-63 245.7 183 65.6
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 2.8e-63 245.7 183 65.6
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 4.7e-63 245.0 173 65.9
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 8.1e-63 244.2 187 67.4
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 8.1e-63 244.2 181 64.1
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 8.1e-63 244.2 173 67.6
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 1.4e-62 243.4 174 64.4
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 4.0e-62 241.9 169 66.9
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 5.2e-62 241.5 184 65.8
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 6.8e-62 241.1 168 67.9
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 1.2e-61 240.4 184 62.5
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.2e-61 240.4 186 61.8
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 2.0e-61 239.6 181 65.2
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 2.0e-61 239.6 177 65.0
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.4e-61 238.4 190 63.7
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 4.4e-61 238.4 190 60.5
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 9.9e-61 237.3 181 64.6
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 9.9e-61 237.3 161 67.7
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 2.9e-60 235.7 156 69.9
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 8.4e-60 234.2 164 68.3
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.4e-59 232.6 141 78.7
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 3.2e-59 232.3 174 62.6
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 3.2e-59 232.3 189 62.4
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 7.1e-59 231.1 198 61.1
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 2.7e-58 229.2 155 69.7
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 2.4e-51 206.1 134 76.9
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 3.2e-51 205.7 134 76.1
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 5.4e-51 204.9 179 56.4
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.6e-50 203.4 145 68.3
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 6.0e-50 201.4 141 69.5
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 8.7e-49 197.6 182 56.0
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 3.3e-48 195.7 190 55.8
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.1e-47 193.0 151 59.6
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 8.1e-47 191.0 155 59.4
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 3.1e-46 189.1 171 55.6
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.5e-45 186.8 167 55.1
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 9.9e-45 184.1 120 73.3
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 6.7e-41 171.4 146 56.8
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.6e-40 168.3 152 55.9
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.1e-35 151.4 119 63.9
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 8.7e-33 144.4 197 46.7
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 1.7e-28 130.2 80 78.8
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 5.0e-28 128.6 80 70.0
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.2e-19 98.2 107 49.5
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 2.7e-18 96.3 150 36.0
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 1.4e-14 84.0 90 54.4
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.2e-13 80.9 119 40.3
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 1.4e-11 73.9 48 68.8
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.8e-09 67.0 45 66.7
Rhsim05G0088200 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.7e-07 60.5 37 70.3
Sopen11g002570 Solanum pennellii HOM05D000011 ORTHO05D000018 6.3e-07 58.5 39 61.5


User provided reference genes

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