Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 1.3e-102 376.3 183 100.0
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 4.7e-76 288.1 176 84.1
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 5.2e-75 284.6 171 77.8
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 5.8e-74 281.2 172 77.9
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 1.6e-71 273.1 174 80.5
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 5.0e-70 268.1 169 78.1
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 4.0e-67 258.5 172 72.7
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 1.5e-66 256.5 171 74.9
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 3.4e-66 255.4 178 69.1
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 9.8e-66 253.8 173 72.3
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 2.9e-65 252.3 172 71.5
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 4.9e-65 251.5 171 72.5
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 3.2e-64 248.8 175 71.4
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 3.5e-63 245.4 171 69.6
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.7e-62 243.0 174 68.4
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 1.7e-62 243.0 171 69.0
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 3.0e-62 242.3 173 68.8
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 3.9e-62 241.9 171 65.5
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 6.6e-62 241.1 173 67.6
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 5.6e-61 238.0 173 67.6
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 9.5e-61 237.3 172 66.9
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.2e-60 236.9 173 67.6
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 2.8e-60 235.7 171 67.3
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 3.6e-60 235.3 171 67.8
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 1.1e-59 233.8 171 64.9
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 3.1e-59 232.3 171 64.9
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 8.9e-59 230.7 171 68.4
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.2e-58 230.3 171 64.3
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.5e-58 229.9 171 64.3
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.4e-58 228.8 170 61.8
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.4e-58 228.8 170 61.8
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.4e-58 228.4 170 65.9
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 5.8e-58 228.0 173 66.5
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 9.9e-58 227.3 170 67.1
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.2e-57 226.1 173 65.9
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 2.9e-57 225.7 172 63.4
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.4e-56 223.4 171 60.8
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 1.9e-56 223.0 177 64.4
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 7.1e-56 221.1 170 64.7
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 7.1e-56 221.1 171 63.7
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.2e-55 220.3 170 63.5
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 7.8e-55 217.6 172 59.3
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 7.8e-55 217.6 159 65.4
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.7e-54 216.5 177 63.8
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 3.9e-54 215.3 175 61.7
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 6.6e-54 214.5 178 57.3
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 1.1e-53 213.8 178 58.4
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 1.5e-53 213.4 175 61.1
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 3.3e-53 212.2 177 60.5
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 3.3e-53 212.2 177 60.5
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 4.3e-53 211.8 178 62.4
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.5e-53 210.7 179 61.5
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 3.6e-52 208.8 176 61.4
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 4.7e-52 208.4 126 77.0
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 3.1e-51 205.7 178 57.9
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 3.1e-51 205.7 177 59.9
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.0e-51 205.3 179 59.2
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 5.2e-51 204.9 189 55.0
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 5.2e-51 204.9 187 57.8
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 8.9e-51 204.1 176 61.4
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 1.5e-50 203.4 178 59.0
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 1.5e-50 203.4 170 58.8
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.4e-50 201.8 172 60.5
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.4e-50 201.8 182 58.8
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 4.4e-50 201.8 170 59.4
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 9.9e-50 200.7 174 58.6
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.7e-49 199.9 177 56.5
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 1.9e-48 196.4 171 60.2
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 4.1e-48 195.3 171 60.2
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 2.7e-47 192.6 140 65.0
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 2.7e-47 192.6 170 59.4
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 2.7e-47 192.6 209 52.6
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 6.0e-47 191.4 176 58.0
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.3e-46 190.3 173 56.1
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 3.9e-46 188.7 166 59.0
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 6.6e-46 188.0 172 58.7
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 6.6e-46 188.0 170 58.2
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 1.5e-45 186.8 172 59.3
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 2.5e-45 186.0 209 51.2
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 4.3e-45 185.3 166 59.0
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.7e-44 181.8 156 60.3
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 8.1e-44 181.0 172 56.4
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 5.2e-43 178.3 176 55.1
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 5.2e-43 178.3 137 63.5
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 2.6e-42 176.0 172 58.1
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 2.6e-42 176.0 152 56.6
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 4.4e-42 175.3 170 58.8
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 9.9e-42 174.1 172 51.2
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.2e-41 172.9 149 61.1
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 3.2e-40 169.1 170 55.3
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.2e-40 169.1 145 58.6
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 1.3e-38 163.7 180 50.6
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.3e-38 163.7 169 52.7
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 1.1e-37 160.6 113 68.1
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 3.3e-37 159.1 176 49.4
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 8.1e-36 154.5 143 57.3
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 3.1e-35 152.5 94 72.3
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 1.1e-32 144.1 172 46.5
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 5.4e-32 141.7 177 44.1
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.6e-28 130.2 83 68.7
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.9e-24 116.7 123 46.3
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 3.2e-24 115.9 65 81.5
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 7.9e-23 111.3 125 44.8
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 1.5e-21 107.1 69 69.6
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.3e-21 105.9 71 69.0
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.4e-19 100.5 69 69.6
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 3.8e-17 92.4 126 37.3
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 8.4e-17 91.3 120 37.5
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.6e-12 77.0 85 47.1
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 5.3e-11 72.0 91 45.1
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.5e-10 70.5 105 41.0
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 2.0e-10 70.1 160 31.9
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.2e-07 60.8 37 64.9
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 2.7e-07 59.7 44 56.8
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.6e-07 59.3 38 60.5
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 6.1e-07 58.5 36 63.9
PRCOL_00001528 Prasinoderma coloniale HOM05D006411 ORTHO05D007563 1.0e-06 57.8 139 30.2
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.4e-06 57.4 103 34.0
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.8e-06 57.0 39 61.5


User provided reference genes

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