Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 7.4e-114 414.1 239 100.0
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 1.7e-81 306.6 193 82.9
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 8.0e-76 287.7 243 75.3
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 1.3e-70 270.4 192 72.4
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 4.3e-69 265.4 192 71.9
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 2.1e-68 263.1 192 71.4
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 2.1e-68 263.1 192 71.4
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 1.4e-67 260.4 197 71.1
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 1.8e-67 260.0 194 69.1
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.8e-67 260.0 192 68.2
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 2.3e-67 259.6 251 66.9
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 3.1e-67 259.2 195 69.7
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 5.2e-67 258.5 193 69.9
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 5.2e-67 258.5 194 69.6
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 6.8e-67 258.1 195 69.7
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 8.9e-67 257.7 192 67.2
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 8.9e-67 257.7 192 67.2
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 2.0e-66 256.5 243 65.0
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 2.6e-66 256.1 243 66.3
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 3.4e-66 255.8 192 68.2
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 4.4e-66 255.4 196 69.4
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 4.4e-66 255.4 192 68.2
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 5.8e-66 255.0 193 67.4
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 7.5e-66 254.6 196 69.4
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 9.8e-66 254.2 238 60.1
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 1.3e-65 253.8 193 68.9
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.7e-65 253.4 197 69.5
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 2.2e-65 253.1 266 62.4
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.2e-65 253.1 192 66.7
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 4.9e-65 251.9 236 56.8
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 4.9e-65 251.9 197 69.0
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 6.4e-65 251.5 193 68.9
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 6.4e-65 251.5 262 61.5
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 8.3e-65 251.1 193 67.9
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 8.3e-65 251.1 192 67.2
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 1.4e-64 250.4 195 67.2
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 1.4e-64 250.4 192 68.2
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.4e-64 249.6 246 64.2
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 3.2e-64 249.2 197 66.5
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 3.2e-64 249.2 192 68.2
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 4.1e-64 248.8 192 66.7
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 5.4e-64 248.4 253 62.1
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 7.0e-64 248.1 192 68.2
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 9.2e-64 247.7 192 69.8
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 2.0e-63 246.5 194 67.0
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 6.0e-63 245.0 192 68.8
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 1.0e-62 244.2 192 65.6
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 1.3e-62 243.8 174 73.6
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 1.7e-62 243.4 261 63.6
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 1.7e-62 243.4 260 64.6
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 5.0e-62 241.9 251 66.5
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 5.0e-62 241.9 233 60.1
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 6.6e-62 241.5 173 71.1
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 8.6e-62 241.1 248 64.9
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 5.6e-61 238.4 243 63.8
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 7.3e-61 238.0 235 55.3
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 9.5e-61 237.7 155 78.1
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 1.2e-60 237.3 244 62.3
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.6e-60 236.9 250 62.0
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 3.6e-60 235.7 169 69.2
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 4.7e-60 235.3 168 71.4
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 8.1e-60 234.6 168 71.4
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 2.3e-59 233.0 192 62.0
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 3.1e-59 232.6 191 62.8
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 4.0e-59 232.3 192 61.5
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 4.0e-59 232.3 173 66.5
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 6.8e-59 231.5 192 63.5
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 1.2e-58 230.7 193 65.8
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 1.5e-58 230.3 187 65.2
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.5e-58 230.3 245 59.6
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 2.6e-58 229.6 193 64.2
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 2.6e-58 229.6 194 60.3
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 2.6e-58 229.6 194 60.3
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 4.4e-58 228.8 169 71.0
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 7.5e-58 228.0 173 66.5
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 1.3e-57 227.3 192 60.4
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 1.7e-57 226.9 192 58.9
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 1.7e-57 226.9 192 58.9
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 6.4e-57 224.9 173 64.7
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.9e-56 223.4 197 60.9
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 3.2e-56 222.6 180 64.4
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 5.4e-56 221.9 194 61.3
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 9.2e-56 221.1 193 63.7
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 3.5e-55 219.2 175 65.1
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 1.0e-54 217.6 153 71.9
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 3.0e-54 216.1 211 55.9
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 2.5e-53 213.0 259 51.7
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 5.8e-50 201.8 175 59.4
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 9.2e-48 194.5 178 56.7
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 8.1e-44 181.4 170 57.1
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 1.4e-43 180.6 127 74.8
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.4e-40 170.6 132 72.0
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 1.4e-40 170.6 194 52.1
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 4.2e-40 169.1 127 69.3
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 1.2e-39 167.5 115 74.8
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 1.6e-39 167.2 194 50.5
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 3.5e-39 166.0 192 47.9
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 5.1e-38 162.2 191 50.3
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 6.2e-36 155.2 180 48.3
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 6.9e-35 151.8 193 47.7
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 1.5e-29 134.0 178 64.0
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 1.5e-29 134.0 178 64.0
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 2.0e-26 123.6 152 48.7
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 1.8e-22 110.5 76 75.0
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 1.8e-22 110.5 168 42.3
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.6e-20 104.0 105 60.0
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 2.8e-20 103.2 65 83.1
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 4.8e-20 102.4 83 66.3
Actinidia31107 Actinidia chinensis HOM05D006601 ORTHO05D008281 2.5e-16 90.1 93 82.8
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 1.8e-14 84.0 55 76.4
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 4.3e-13 79.3 138 37.0
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 3.8e-09 66.2 99 48.5
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 1.1e-08 64.7 37 83.8
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 5.5e-08 62.4 30 80.0
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 4.6e-07 59.3 30 73.3
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 7.9e-07 58.5 73 47.9


User provided reference genes

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