Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10244 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 4.3e-160 568.2 333 100.0
vmacro10253 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 7.2e-107 391.3 410 62.4
Rhsim09G0146600 Rhododendron simsii HOM05D002746 ORTHO05D003037 7.5e-56 221.9 410 43.9
Dinv36375 Davidia involucrata HOM05D002746 ORTHO05D003037 8.4e-39 165.2 356 39.9
Actinidia34797 Actinidia chinensis HOM05D001960 ORTHO05D004348 1.4e-38 164.5 350 40.6
Actinidia18545 Actinidia chinensis HOM05D002746 ORTHO05D003037 1.9e-38 164.1 239 48.5
CSS0002034 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 8.7e-36 155.2 337 40.7
Actinidia06732 Actinidia chinensis HOM05D002746 ORTHO05D003037 3.3e-35 153.3 239 46.9
CSS0033737 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 1.2e-29 134.8 240 42.9
TAR636G2586 Trochodendron aralioides HOM05D002746 ORTHO05D003037 1.1e-19 101.7 355 32.7
CiPaw.01G266600 Carya illinoinensis HOM05D002746 ORTHO05D003037 2.5e-19 100.5 217 38.7
CAN.G694.42 Capsicum annuum HOM05D002746 ORTHO05D003037 4.3e-19 99.8 122 49.2
Prupe.2G206000 Prunus persica HOM05D002746 ORTHO05D003037 3.7e-18 96.7 239 38.1
TWI63G0026 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 4.8e-18 96.3 203 40.4
GSVIVG01016210001 Vitis vinifera HOM05D002746 ORTHO05D003037 1.4e-17 94.7 340 31.2
Lsat_1_v5_gn_9_71621 Lactuca sativa HOM05D002746 ORTHO05D003037 9.0e-17 92.0 222 36.0
Nn6g35239 Nelumbo nucifera HOM05D002746 ORTHO05D003037 9.0e-17 92.0 223 36.8
TAR633G0282 Trochodendron aralioides HOM05D002746 ORTHO05D003037 9.0e-17 92.0 232 38.4
QL08p053342 Quercus lobata HOM05D002746 ORTHO05D003037 2.0e-16 90.9 250 36.4
MD01G1100300 Malus domestica HOM05D002746 ORTHO05D003037 4.5e-16 89.7 231 39.4
Cc02_g10720 Coffea canephora HOM05D002746 ORTHO05D003037 5.8e-16 89.4 224 36.2
TAR369G0776 Trochodendron aralioides HOM05D002746 ORTHO05D003037 7.6e-16 89.0 327 32.4
Nitab4.5_0002692g0020 Nicotiana tabacum HOM05D002746 ORTHO05D003037 1.0e-15 88.6 215 35.8
HanXRQChr13g0404481 Helianthus annuus HOM05D002746 ORTHO05D003037 1.3e-15 88.2 221 35.3
ECA232G1997 Erigeron canadensis HOM05D002746 ORTHO05D003037 1.7e-15 87.8 205 35.6
Haze_23707 Corylus avellana HOM05D002746 ORTHO05D003037 2.2e-15 87.4 123 47.2
Migut.F01699 Erythranthe guttata HOM05D002746 ORTHO05D003037 2.2e-15 87.4 223 35.0
Atru.chr12.881 Acer truncatum HOM05D002746 ORTHO05D003037 1.1e-14 85.1 234 36.8
Oeu046646.1 Olea europaea HOM05D002746 ORTHO05D003037 1.4e-14 84.7 190 36.8
Migut.F01943 Erythranthe guttata HOM05D002746 ORTHO05D003037 1.9e-14 84.3 352 30.7
MD07G1167400 Malus domestica HOM05D002746 ORTHO05D003037 1.9e-14 84.3 223 39.0
CiPaw.02G170900 Carya illinoinensis HOM05D002746 ORTHO05D003037 3.2e-14 83.6 218 36.7
GSVIVG01031478001 Vitis vinifera HOM05D002746 ORTHO05D003037 3.2e-14 83.6 122 46.7
Gorai.010G207300 Gossypium raimondii HOM05D002746 ORTHO05D003037 2.1e-13 80.9 176 39.2
Haze_16759 Corylus avellana HOM05D002746 ORTHO05D003037 2.7e-13 80.5 231 34.2
Gohir.D06G176308 Gossypium hirsutum HOM05D002746 ORTHO05D003037 2.7e-13 80.5 176 39.2
TWI38G1635 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 2.7e-13 80.5 236 35.6
Cpa.g.sc53.153 Carica papaya HOM05D002746 ORTHO05D003037 4.6e-13 79.7 228 36.0
Cc01_g10360 Coffea canephora HOM05D002746 ORTHO05D003037 4.6e-13 79.7 123 44.7
Sed0007948 Sechium edule HOM05D002746 ORTHO05D003037 7.9e-13 79.0 224 34.8
Hma1.2p1_0117F.1_g056370 Hydrangea macrophylla HOM05D002746 ORTHO05D003037 1.0e-12 78.6 235 34.5
vmacro14395 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 1.3e-12 78.2 123 43.9
MSTRG.9139 Avicennia marina HOM05D002746 ORTHO05D003037 1.8e-12 77.8 150 39.3
Nn2g13843 Nelumbo nucifera HOM05D002746 ORTHO05D003037 1.8e-12 77.8 215 36.7
THA.LOC104826901 Tarenaya hassleriana HOM05D002746 ORTHO05D003037 1.8e-12 77.8 211 34.6
Thecc.10G087200 Theobroma cacao HOM05D002746 ORTHO05D003037 1.8e-12 77.8 124 45.2
Gohir.A06G168700 Gossypium hirsutum HOM05D002746 ORTHO05D003037 2.3e-12 77.4 172 39.5
SGA_v2.0_scaffold51G18717 Striga asiatica HOM05D002746 ORTHO05D003037 2.3e-12 77.4 150 41.3
DCAR_006399 Daucus carota HOM05D002746 ORTHO05D003037 5.1e-12 76.3 154 39.0
Nitab4.5_0004987g0050 Nicotiana tabacum HOM05D002746 ORTHO05D003037 8.7e-12 75.5 122 40.2
FAN06G2396 Fragaria x ananassa HOM05D002746 ORTHO05D003037 1.1e-11 75.1 147 42.2
Rhsim11G0027700 Rhododendron simsii HOM05D002746 ORTHO05D003037 1.1e-11 75.1 129 39.5
SalBow4G2846 Salvia bowleyana HOM05D002746 ORTHO05D003037 1.5e-11 74.7 151 37.7
SalBow6G2132 Salvia bowleyana HOM05D002746 ORTHO05D003037 1.5e-11 74.7 213 33.3
ClCG08G007860 Citrullus lanatus HOM05D002746 ORTHO05D003037 1.9e-11 74.3 231 33.3
Potri.010G229100 Populus trichocarpa HOM05D002746 ORTHO05D003037 1.9e-11 74.3 241 34.4
Solyc11g008090.2 Solanum lycopersicum HOM05D002746 ORTHO05D003037 1.9e-11 74.3 328 28.7
FAN03G0996 Fragaria x ananassa HOM05D002746 ORTHO05D003037 2.5e-11 73.9 147 41.5
TWI79G0510 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 2.5e-11 73.9 129 41.9
FvH4_7g18390 Fragaria vesca HOM05D002746 ORTHO05D003037 3.3e-11 73.6 147 41.5
FAN06G0235 Fragaria x ananassa HOM05D002746 ORTHO05D003037 3.3e-11 73.6 147 41.5
Gorai.009G309800 Gossypium raimondii HOM05D002746 ORTHO05D003037 3.3e-11 73.6 332 29.2
Nitab4.5_0000096g0260 Nicotiana tabacum HOM05D002746 ORTHO05D003037 3.3e-11 73.6 217 31.8
Nitab4.5_0002285g0050 Nicotiana tabacum HOM05D002746 ORTHO05D003037 3.3e-11 73.6 200 31.0
SGA_v2.0_scaffold2G01341 Striga asiatica HOM05D002746 ORTHO05D003037 3.3e-11 73.6 218 33.0
Actinidia20430 Actinidia chinensis HOM05D002746 ORTHO05D003037 5.7e-11 72.8 123 43.9
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 5.7e-11 72.8 221 31.7
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 5.7e-11 72.8 221 31.7
FAN10G1392 Fragaria x ananassa HOM05D002746 ORTHO05D003037 5.7e-11 72.8 147 41.5
FAN10G3770 Fragaria x ananassa HOM05D002746 ORTHO05D003037 5.7e-11 72.8 147 41.5
Gohir.D05G293300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 5.7e-11 72.8 332 28.9
Sopen11g003940 Solanum pennellii HOM05D002746 ORTHO05D003037 5.7e-11 72.8 208 32.2
TWI79G0630 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 5.7e-11 72.8 128 39.8
MSTRG.8123 Avicennia marina HOM05D002746 ORTHO05D003037 7.4e-11 72.4 227 32.2
THA.LOC104816434 Tarenaya hassleriana HOM05D002746 ORTHO05D003037 7.4e-11 72.4 210 36.7
CiPaw.13G123400 Carya illinoinensis HOM05D002746 ORTHO05D003037 9.6e-11 72.0 123 43.1
FAN11G2794 Fragaria x ananassa HOM05D002746 ORTHO05D003037 9.6e-11 72.0 200 36.0
FAN16G2248 Fragaria x ananassa HOM05D002746 ORTHO05D003037 9.6e-11 72.0 182 35.7
SalBow3G3794 Salvia bowleyana HOM05D002746 ORTHO05D003037 9.6e-11 72.0 123 43.1
CAN.G459.30 Capsicum annuum HOM05D002746 ORTHO05D003037 1.3e-10 71.6 117 41.9
CDE04G0545 Ceratophyllum demersum HOM05D002746 ORTHO05D003037 1.3e-10 71.6 132 43.9
ECA233G0311 Erigeron canadensis HOM05D002746 ORTHO05D003037 1.3e-10 71.6 201 32.3
FAN01G0726 Fragaria x ananassa HOM05D002746 ORTHO05D003037 1.3e-10 71.6 147 40.1
Actinidia03695 Actinidia chinensis HOM05D002746 ORTHO05D003037 1.6e-10 71.2 207 31.9
Aqoxy1G01110 Aquilegia oxysepala HOM05D002746 ORTHO05D003037 1.6e-10 71.2 125 40.8
Duzib168G1483 Durio zibethinus HOM05D002746 ORTHO05D003037 1.6e-10 71.2 128 42.2
Duzib170G0446 Durio zibethinus HOM05D002746 ORTHO05D003037 1.6e-10 71.2 128 41.4
CANSAT56G3275 Cannabis sativa HOM05D002746 ORTHO05D003037 2.1e-10 70.9 121 43.8
Gohir.A05G292300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 2.1e-10 70.9 208 35.1
Nitab4.5_0000329g0090 Nicotiana tabacum HOM05D002746 ORTHO05D003037 2.1e-10 70.9 123 44.7
Sc20g0001570 Simmondsia chinensis HOM05D002746 ORTHO05D003037 2.1e-10 70.9 232 31.0
Dinv16215 Davidia involucrata HOM05D002746 ORTHO05D003037 2.8e-10 70.5 190 35.3
HanXRQChr08g0218461 Helianthus annuus HOM05D002746 ORTHO05D003037 3.7e-10 70.1 136 37.5
Lj2A1009T38 Lonicera japonica HOM05D002746 ORTHO05D003037 3.7e-10 70.1 203 30.5
Sp6g38420 Schrenkiella parvula HOM05D002746 ORTHO05D003037 3.7e-10 70.1 224 33.9
Thecc.09G350400 Theobroma cacao HOM05D002746 ORTHO05D003037 3.7e-10 70.1 340 28.8
RcHm_v2.0_Chr1g0362201 Rosa chinensis HOM05D002746 ORTHO05D003037 4.8e-10 69.7 185 33.5
MELO3C019841.2 Cucumis melo HOM05D002746 ORTHO05D003037 6.2e-10 69.3 221 33.0
FAN21G0473 Fragaria x ananassa HOM05D002746 ORTHO05D003037 6.2e-10 69.3 209 34.4
Potri.008G032600 Populus trichocarpa HOM05D002746 ORTHO05D003037 6.2e-10 69.3 243 33.7
CAN.G546.40 Capsicum annuum HOM05D002746 ORTHO05D003037 8.2e-10 68.9 122 38.5
Nitab4.5_0003880g0010 Nicotiana tabacum HOM05D002746 ORTHO05D003037 8.2e-10 68.9 187 38.0
PGR142G3471 Punica granatum HOM05D002746 ORTHO05D003037 8.2e-10 68.9 228 32.5
Sabra10G0177700 Salix brachista HOM05D002746 ORTHO05D003037 8.2e-10 68.9 245 32.7
SalBow2G3559 Salvia bowleyana HOM05D002746 ORTHO05D003037 1.1e-09 68.6 118 40.7
Dinv29373 Davidia involucrata HOM05D002746 ORTHO05D003037 1.4e-09 68.2 208 31.2
QL01p015272 Quercus lobata HOM05D002746 ORTHO05D003037 1.4e-09 68.2 335 29.9
Hund01439 Selenicereus undatus HOM05D002746 ORTHO05D003037 1.4e-09 68.2 130 41.5
Ah.01g003290 Amaranthus hybridus HOM05D002746 ORTHO05D003037 2.4e-09 67.4 122 37.7
Migut.N02561 Erythranthe guttata HOM05D002746 ORTHO05D003037 2.4e-09 67.4 123 42.3
Prupe.6G111900 Prunus persica HOM05D002746 ORTHO05D003037 2.4e-09 67.4 340 28.2
RcHm_v2.0_Chr5g0056951 Rosa chinensis HOM05D002746 ORTHO05D003037 2.4e-09 67.4 199 33.7
Sabra04G0146600 Salix brachista HOM05D002746 ORTHO05D003037 2.4e-09 67.4 119 39.5
Cfa010292 Carpinus fangiana HOM05D002746 ORTHO05D003037 3.1e-09 67.0 206 29.6
CsaV3_2G021060 Cucumis sativus L. HOM05D002746 ORTHO05D003037 3.1e-09 67.0 200 31.5
Manes.07G094800 Manihot esculenta HOM05D002746 ORTHO05D003037 3.1e-09 67.0 204 34.3
Oeu007312.2 Olea europaea HOM05D002746 ORTHO05D003037 3.1e-09 67.0 121 42.1
Atru.chr3.3527 Acer truncatum HOM05D002746 ORTHO05D003037 4.1e-09 66.6 125 39.2
BcaB04g21203 Brassica carinata HOM05D002746 ORTHO05D003037 5.3e-09 66.2 121 40.5
COL.COLO4_09863 Corchorus olitorius HOM05D002746 ORTHO05D003037 5.3e-09 66.2 159 38.4
A03p01620 Brassica napus HOM05D002746 ORTHO05D003037 6.9e-09 65.9 151 38.4
A10p31850 Brassica napus HOM05D002746 ORTHO05D003037 1.2e-08 65.1 148 41.9
BraA10t45230Z Brassica rapa HOM05D002746 ORTHO05D003037 1.2e-08 65.1 148 41.9
FAN25G1769 Fragaria x ananassa HOM05D002746 ORTHO05D003037 1.2e-08 65.1 207 30.9
PGSC0003DMG402031076 Solanum tuberosum HOM05D002746 ORTHO05D003037 1.5e-08 64.7 112 40.2
EL10Ac9g22611 Beta vulgaris HOM05D002746 ORTHO05D003037 2.0e-08 64.3 123 36.6
AUR62029178 Chenopodium quinoa HOM05D002746 ORTHO05D003037 2.6e-08 63.9 128 38.3
DCAR_019068 Daucus carota HOM05D002746 ORTHO05D003037 2.6e-08 63.9 236 31.4
PSO339G4755 Papaver somniferum HOM05D002746 ORTHO05D003037 2.6e-08 63.9 149 34.2
MSTRG.17763 Avicennia marina HOM05D002746 ORTHO05D003037 3.4e-08 63.5 137 41.6
BolC9t59996H Brassica oleracea HOM05D002746 ORTHO05D003037 3.4e-08 63.5 148 37.8
Glyma.12G080700 Glycine max HOM05D002746 ORTHO05D003037 5.8e-08 62.8 126 38.1
MBI13_g39327_MAGBIO Magnolia biondii HOM05D002746 ORTHO05D003037 5.8e-08 62.8 119 42.0
Ciclev10028947m.g Citrus clementina HOM05D002746 ORTHO05D003037 7.6e-08 62.4 335 26.0
Gohir.A05G107100 Gossypium hirsutum HOM05D002746 ORTHO05D003037 7.6e-08 62.4 198 34.3
Potri.004G216000 Populus trichocarpa HOM05D002746 ORTHO05D003037 7.6e-08 62.4 125 36.8
ClCG03G002610 Citrullus lanatus HOM05D002746 ORTHO05D003037 1.0e-07 62.0 124 37.9
Gohir.D05G107200 Gossypium hirsutum HOM05D002746 ORTHO05D003037 1.0e-07 62.0 198 33.8
Gorai.009G111300 Gossypium raimondii HOM05D002746 ORTHO05D003037 1.0e-07 62.0 198 33.8
PSO063G2563 Papaver somniferum HOM05D002746 ORTHO05D003037 1.0e-07 62.0 149 33.6
Potri.009G006100 Populus trichocarpa HOM05D002746 ORTHO05D003037 1.0e-07 62.0 131 35.1
Solyc11g066350.2 Solanum lycopersicum HOM05D002746 ORTHO05D003037 1.0e-07 62.0 169 34.9
MELO3C004971.2 Cucumis melo HOM05D002746 ORTHO05D003037 1.3e-07 61.6 122 36.1
Manes.11G151800 Manihot esculenta HOM05D002746 ORTHO05D003037 1.3e-07 61.6 123 36.6
Aa31LG3G3050 Aethionema arabicum HOM05D002746 ORTHO05D003037 2.2e-07 60.8 204 29.9
Sopen11g026100 Solanum pennellii HOM05D002746 ORTHO05D003037 2.2e-07 60.8 169 34.3
TWI75G0416 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 2.2e-07 60.8 123 36.6
PGSC0003DMG400000414 Solanum tuberosum HOM05D002746 ORTHO05D003037 2.9e-07 60.5 211 34.1
Eucgr.B03933 Eucalyptus grandis HOM05D002746 ORTHO05D003037 3.8e-07 60.1 214 31.8
CsaV3_1G013340 Cucumis sativus L. HOM05D002746 ORTHO05D003037 5.0e-07 59.7 124 37.1
PGR119G0855 Punica granatum HOM05D002746 ORTHO05D003037 5.0e-07 59.7 344 27.3
C09p72570 Brassica napus HOM05D002746 ORTHO05D003037 6.5e-07 59.3 231 31.6
FvH4_3g30760 Fragaria vesca HOM05D002746 ORTHO05D003037 6.5e-07 59.3 200 34.0
HanXRQChr13g0396261 Helianthus annuus HOM05D002746 ORTHO05D003037 6.5e-07 59.3 162 32.7
CARHR208960 Cardamine hirsuta HOM05D002746 ORTHO05D003037 8.4e-07 58.9 80 47.5
Phvul.011G085600 Phaseolus vulgaris HOM05D002746 ORTHO05D003037 8.4e-07 58.9 126 37.3
C03p54020 Brassica napus HOM05D002746 ORTHO05D003037 1.4e-06 58.2 126 37.3
Thhalv10013000m.g Eutrema salsugineum HOM05D002746 ORTHO05D003037 1.4e-06 58.2 86 44.2
ECA233G2466 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.9e-06 57.8 205 29.8
Medtr4g057530 Medicago truncatula HOM05D002746 ORTHO05D003037 2.5e-06 57.4 346 23.4
MD11G1147400 Malus domestica HOM05D002746 ORTHO05D003037 3.2e-06 57.0 326 26.7
Lsat_1_v5_gn_6_44580 Lactuca sativa HOM05D002746 ORTHO05D003037 5.5e-06 56.2 210 30.0
BcaC09g48090 Brassica carinata HOM05D002746 ORTHO05D003037 7.2e-06 55.8 119 38.7
Dinv31245 Davidia involucrata HOM05D002746 ORTHO05D003037 7.2e-06 55.8 195 31.8
Actinidia38881 Actinidia chinensis HOM05D000468 ORTHO05D000548 9.3e-06 55.5 206 30.1
AT5G04320 Arabidopsis thaliana HOM05D002746 ORTHO05D003037 9.3e-06 55.5 106 37.7


User provided reference genes

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