Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 3.7e-188 661.4 331 100.0
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 5.4e-155 551.2 307 88.6
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.1e-142 510.4 307 83.1
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.6e-141 505.8 308 81.8
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 2.1e-138 496.1 308 80.8
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 2.4e-134 482.6 308 76.0
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 7.3e-128 461.1 313 72.5
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 4.4e-125 451.8 307 73.0
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 9.9e-125 450.7 309 69.3
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 8.4e-124 447.6 307 71.0
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 1.1e-123 447.2 309 70.9
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.0e-121 440.7 309 68.6
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 1.7e-121 439.9 308 70.5
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 1.9e-120 436.4 309 67.6
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 3.3e-120 435.6 307 68.7
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.6e-119 433.3 308 70.1
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 6.2e-119 431.4 307 70.0
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 2.4e-118 429.5 307 68.4
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 3.1e-118 429.1 318 68.2
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 4.0e-118 428.7 307 68.7
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 6.9e-118 427.9 307 68.7
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 2.6e-117 426.0 307 69.4
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 7.6e-117 424.5 306 68.3
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 9.9e-117 424.1 311 65.6
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.7e-116 423.3 307 68.4
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 1.7e-116 423.3 307 68.1
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 1.1e-115 420.6 307 66.4
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 1.4e-115 420.2 309 66.7
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.2e-115 419.1 307 68.1
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 4.2e-115 418.7 307 67.8
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 9.3e-115 417.5 309 66.3
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 4.6e-114 415.2 308 66.6
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 4.6e-114 415.2 307 65.8
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 7.9e-114 414.5 308 66.9
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.0e-113 414.1 308 66.9
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.0e-113 412.5 308 66.9
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 6.7e-113 411.4 309 65.0
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.5e-112 410.2 307 66.1
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.9e-112 409.8 307 65.5
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 5.6e-112 408.3 307 65.1
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.6e-111 406.8 307 64.8
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 2.1e-111 406.4 307 65.5
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 3.7e-111 405.6 307 65.1
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 8.1e-111 404.4 307 64.8
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.4e-110 403.7 308 64.3
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 4.0e-110 402.1 307 64.2
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 1.2e-109 400.6 307 65.1
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 5.8e-109 398.3 429 52.0
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.7e-108 396.7 307 63.5
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 2.2e-108 396.4 307 63.8
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 8.4e-108 394.4 307 62.9
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 5.5e-107 391.7 308 63.3
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 5.5e-107 391.7 308 63.3
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 1.2e-106 390.6 353 59.5
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 2.1e-106 389.8 308 62.3
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.5e-106 389.0 307 62.5
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 1.0e-105 387.5 307 62.2
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 8.7e-105 384.4 307 61.2
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.3e-104 382.1 266 74.4
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.3e-103 380.6 251 77.7
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.6e-103 380.2 266 74.1
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.6e-103 380.2 307 59.9
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 2.4e-102 376.3 305 59.7
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 9.0e-102 374.4 352 57.7
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 3.4e-101 372.5 271 67.5
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 2.2e-100 369.8 308 59.4
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.1e-99 367.5 358 55.0
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 5.5e-99 365.2 308 58.1
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 9.3e-99 364.4 292 61.3
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 2.1e-98 363.2 308 58.1
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 2.7e-98 362.8 342 54.7
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 6.3e-95 351.7 306 56.9
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 5.3e-94 348.6 304 55.3
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 2.1e-90 336.7 308 54.5
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 2.7e-90 336.3 296 59.8
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 2.7e-90 336.3 308 56.2
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 3.0e-89 332.8 309 52.1
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 3.0e-89 332.8 309 52.1
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 5.1e-89 332.0 309 52.1
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 8.8e-89 331.3 309 52.8
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.7e-87 327.0 239 65.3
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 3.1e-86 322.8 237 67.9
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 5.3e-86 322.0 314 51.3
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 2.9e-84 316.2 233 64.8
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 6.5e-84 315.1 301 52.8
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 1.4e-83 313.9 309 48.9
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 9.4e-83 311.2 294 51.4
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 2.1e-82 310.1 309 49.5
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 4.7e-82 308.9 307 54.1
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 6.1e-82 308.5 330 53.0
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 7.9e-82 308.1 309 48.2
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 2.3e-81 306.6 309 48.9
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 3.0e-81 306.2 291 51.5
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 6.3e-79 298.5 215 71.6
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 7.0e-78 295.0 241 62.7
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 2.6e-77 293.1 231 67.1
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 5.5e-75 285.4 222 62.2
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 4.4e-72 275.8 292 47.6
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 8.5e-68 261.5 303 45.9
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 6.1e-66 255.4 176 73.3
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 1.6e-58 230.7 243 48.1
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 1.7e-55 220.7 307 43.0
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 4.4e-48 196.1 293 35.8
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.7e-44 184.1 115 75.7
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.2e-37 161.4 272 30.5
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 8.3e-31 138.7 112 59.8
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.5e-27 127.1 67 88.1
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 9.5e-27 125.2 67 86.6
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.8e-25 120.9 68 79.4
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 2.2e-23 114.0 65 78.5
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 3.8e-23 113.2 64 78.1
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 1.4e-09 68.2 63 57.1
Lsat_1_v5_gn_4_175920 Lactuca sativa HOM05D001061 ORTHO05D006808 1.1e-06 58.5 49 51.0


User provided reference genes

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