Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10190 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 0.0e+00 1099.7 554 100.0
vmacro23524 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 0.0e+00 1099.7 554 100.0
vmacro23315 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 3.3e-165 585.9 467 62.3
vmacro21104 Vaccinium macrocarpon HOM05D008336 ORTHO05D008997 6.4e-92 342.4 438 45.2
Rhsim08G0044600 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.7e-52 211.5 274 44.2
vmacro04464 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 1.9e-51 208.0 233 47.2
Rhsim09G0068800 Rhododendron simsii HOM05D008336 ORTHO05D011831 5.3e-46 189.9 366 35.0
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 2.1e-39 167.9 381 27.6
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 5.3e-38 163.3 368 30.2
Rhsim03G0120000 Rhododendron simsii HOM05D008336 ORTHO05D011520 4.5e-37 160.2 417 31.2
Rhsim01G0070500 Rhododendron simsii HOM05D008336 ORTHO05D011520 7.2e-35 152.9 163 48.5
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 4.6e-34 150.2 351 26.8
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 1.3e-33 148.7 365 25.5
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 1.3e-33 148.7 367 25.6
vmacro21837 Vaccinium macrocarpon HOM05D000894 ORTHO05D002325 1.3e-33 148.7 137 55.5
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 1.8e-33 148.3 365 25.5
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 3.0e-33 147.5 436 24.8
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 9.7e-32 142.5 401 24.4
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.8e-31 140.2 372 25.3
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-29 134.8 328 27.1
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 5.9e-29 133.3 314 26.1
Rhsim05G0088200 Rhododendron simsii HOM05D008336 ORTHO05D011831 2.9e-28 131.0 136 49.3
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 6.5e-28 129.8 351 25.1
Rhsim08G0116600 Rhododendron simsii HOM05D008336 ORTHO05D011520 4.6e-26 123.6 231 34.6
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 1.0e-25 122.5 317 25.2
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 3.9e-25 120.6 304 27.0
Rhsim02G0151400 Rhododendron simsii HOM05D008336 ORTHO05D011831 2.5e-24 117.9 228 32.5
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-24 117.5 336 23.8
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.3e-24 117.1 334 24.9
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.3e-24 117.1 334 24.9
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 1.3e-23 115.5 372 20.2
Pp3c1_20770 Physcomitrium patens HOM05D000824 ORTHO05D003555 3.7e-23 114.0 396 22.7
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 2.4e-22 111.3 333 23.4
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 2.4e-22 111.3 247 27.1
Rhsim07G0148400 Rhododendron simsii HOM05D008336 ORTHO05D011520 5.3e-22 110.2 121 47.1
Rhsim03G0182800 Rhododendron simsii HOM05D022062 ORTHO05D025123 5.9e-21 106.7 110 50.9
vmacro14160 Vaccinium macrocarpon HOM05D001398 ORTHO05D015576 1.0e-20 105.9 68 72.1
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 6.5e-20 103.2 189 29.6
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 5.5e-19 100.1 431 21.1
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 1.6e-18 98.6 194 29.9
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 6.1e-18 96.7 223 26.5
Dinv06490 Davidia involucrata HOM05D000824 ORTHO05D010384 7.9e-18 96.3 187 29.9
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 7.9e-18 96.3 324 22.5
CANSAT25G2360 Cannabis sativa HOM05D009267 ORTHO05D010384 1.8e-17 95.1 390 21.5
Glyma.05G020600 Glycine max HOM05D000824 ORTHO05D003555 3.9e-17 94.0 381 21.5
Glyma.17G078700 Glycine max HOM05D000824 ORTHO05D003555 8.8e-17 92.8 379 21.1
vmacro00389 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 8.8e-17 92.8 108 40.7
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 1.1e-16 92.4 222 25.2
CANSAT80G1236 Cannabis sativa HOM05D000824 ORTHO05D003555 1.5e-16 92.0 334 20.1
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 2.0e-16 91.7 199 29.1
Os03g0214100 Oryza sativa ssp. japonica HOM05D000824 ORTHO05D003555 3.3e-16 90.9 353 21.8
vmacro14089 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 2.8e-15 87.8 203 31.0
Zm00001eb400180 Zea mays HOM05D000824 ORTHO05D003555 3.7e-15 87.4 354 21.5
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 4.8e-15 87.0 185 28.1
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 4.8e-15 87.0 209 24.4
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 8.2e-15 86.3 324 23.1
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 1.1e-14 85.9 373 23.9
BraA02t07945Z Brassica rapa HOM05D000824 ORTHO05D002221 1.1e-14 85.9 341 22.0
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-14 85.5 230 25.7
Rhsim11G0036000 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.8e-14 85.1 78 46.2
Lj4A909T87 Lonicera japonica HOM05D000824 ORTHO05D002221 2.4e-14 84.7 334 21.0
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 2.4e-14 84.7 208 26.4
A02p29120 Brassica napus HOM05D000824 ORTHO05D002221 3.1e-14 84.3 341 21.7
BolC2t10676H Brassica oleracea HOM05D000824 ORTHO05D002221 3.1e-14 84.3 341 22.0
Zm00001eb008630 Zea mays HOM05D000824 ORTHO05D003555 3.1e-14 84.3 352 21.3
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 4.1e-14 84.0 377 22.5
C02p46200 Brassica napus HOM05D000824 ORTHO05D002221 4.1e-14 84.0 341 22.0
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 4.1e-14 84.0 234 24.4
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 7.0e-14 83.2 337 23.4
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 7.0e-14 83.2 355 23.4
EL10Ac1g02309 Beta vulgaris HOM05D003315 ORTHO05D003407 1.2e-13 82.4 337 23.1
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.5e-13 80.5 201 24.9
Carub.0008s0271 Capsella rubella HOM05D000824 ORTHO05D002221 7.7e-13 79.7 338 22.5
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 7.7e-13 79.7 226 22.1
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.7e-12 78.6 287 24.0
AL1G45720 Arabidopsis lyrata HOM05D000824 ORTHO05D002221 2.2e-12 78.2 334 22.2
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-12 78.2 282 22.0
Peaxi162Scf00408g00837 Petunia axillaris HOM05D000824 ORTHO05D002221 2.2e-12 78.2 336 19.6
CDE01G0675 Ceratophyllum demersum HOM05D000824 ORTHO05D002221 6.5e-12 76.6 332 19.6
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 6.5e-12 76.6 271 23.6
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 1.5e-11 75.5 248 26.2
Hund14841 Selenicereus undatus HOM05D003315 ORTHO05D003407 1.9e-11 75.1 322 22.7
HanXRQChr10g0319611 Helianthus annuus HOM05D000824 ORTHO05D002221 7.2e-11 73.2 339 19.5
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.4e-11 72.8 249 26.9
CANSAT01G2441 Cannabis sativa HOM05D009267 ORTHO05D010384 2.1e-10 71.6 270 23.3
Aqoxy7G01297 Aquilegia oxysepala HOM05D012735 ORTHO05D011950 1.4e-09 68.9 303 19.1
Aqoxy7G01312 Aquilegia oxysepala HOM05D012735 ORTHO05D011950 1.4e-09 68.9 303 19.1
Peaxi162Scf00244g00139 Petunia axillaris HOM05D002327 ORTHO05D002306 5.2e-09 67.0 280 21.8
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 6.7e-09 66.6 214 21.5
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 8.8e-09 66.2 462 20.1
Rhsim01G0173300 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.1e-08 65.9 115 35.7
Hund30751 Selenicereus undatus HOM05D003315 ORTHO05D003407 1.1e-08 65.9 339 22.4
Hund23247 Selenicereus undatus HOM05D003315 ORTHO05D003407 2.6e-08 64.7 284 23.9
CANSAT11G0110 Cannabis sativa HOM05D009267 ORTHO05D010384 3.3e-08 64.3 202 23.3
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 3.3e-08 64.3 259 24.3
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 3.3e-08 64.3 204 27.0
AUR62022786 Chenopodium quinoa HOM05D003315 ORTHO05D003407 4.4e-08 63.9 337 21.1
PGSC0003DMG400041730 Solanum tuberosum HOM05D002327 ORTHO05D002306 4.4e-08 63.9 405 21.2
vmacro11749 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 4.4e-08 63.9 143 30.1
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 5.7e-08 63.5 235 23.0
Hund12761 Selenicereus undatus HOM05D003315 ORTHO05D003407 5.7e-08 63.5 335 23.0
Oeu030932.1 Olea europaea HOM05D019936 ORTHO05D010619 7.5e-08 63.2 119 27.7
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 7.5e-08 63.2 287 24.0
Dinv08483 Davidia involucrata HOM05D006612 ORTHO05D010384 1.3e-07 62.4 187 25.7
Oeu001787.1 Olea europaea HOM05D019936 ORTHO05D010619 1.7e-07 62.0 108 25.0
CSS0015794 Camellia sinensis var. sinensis HOM05D008336 ORTHO05D010619 2.2e-07 61.6 178 27.5
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 2.2e-07 61.6 246 25.2
PGSC0003DMG400045585 Solanum tuberosum HOM05D002327 ORTHO05D002306 2.8e-07 61.2 278 22.3
EL10Ac8g19549 Beta vulgaris HOM05D000096 ORTHO05D000045 6.3e-07 60.1 167 24.0
Rhsim05G0146500 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.4e-06 58.9 111 37.8
Sopen06g019020 Solanum pennellii HOM05D002261 ORTHO05D002334 2.4e-06 58.2 165 29.1
Nitab4.5_0000877g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.1e-06 57.8 104 33.7
TAR063G0004 Trochodendron aralioides HOM05D000824 ORTHO05D010357 4.1e-06 57.4 134 26.9
TAR091G0002 Trochodendron aralioides HOM05D000824 ORTHO05D000001 4.1e-06 57.4 134 26.9
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.1e-06 56.2 154 27.9


User provided reference genes

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