Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 7.5e-59 230.3 118 100.0
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 7.5e-59 230.3 118 100.0
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 2.8e-29 132.1 78 88.5
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 5.8e-27 124.4 78 80.8
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 5.8e-27 124.4 78 82.1
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 2.2e-26 122.5 78 82.1
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 2.9e-26 122.1 82 78.0
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 2.9e-26 122.1 78 80.8
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 8.4e-26 120.6 78 79.5
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 4.2e-25 118.2 77 77.9
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 4.2e-25 118.2 78 75.6
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 5.4e-25 117.9 78 79.5
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 9.3e-25 117.1 77 76.6
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 9.3e-25 117.1 78 76.9
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 2.7e-24 115.5 76 77.6
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 3.5e-24 115.2 78 74.4
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 3.5e-24 115.2 78 74.4
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 4.6e-24 114.8 78 76.9
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 4.6e-24 114.8 78 75.6
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 6.0e-24 114.4 79 75.9
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 7.8e-24 114.0 79 72.2
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 1.3e-23 113.2 76 75.0
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 1.3e-23 113.2 78 74.4
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.7e-23 112.8 76 76.3
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 2.3e-23 112.5 79 74.7
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 2.3e-23 112.5 79 72.2
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 2.3e-23 112.5 79 72.2
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 2.3e-23 112.5 77 72.7
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 2.3e-23 112.5 77 71.4
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 2.3e-23 112.5 77 70.1
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 2.3e-23 112.5 77 75.3
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 3.0e-23 112.1 77 72.7
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 5.1e-23 111.3 77 76.6
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 5.1e-23 111.3 102 62.7
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 6.6e-23 110.9 77 74.0
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 6.6e-23 110.9 77 71.4
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 8.7e-23 110.5 79 73.4
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 8.7e-23 110.5 79 73.4
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 1.1e-22 110.2 79 72.2
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.1e-22 110.2 79 72.2
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 1.1e-22 110.2 76 75.0
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 1.5e-22 109.8 79 72.2
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 1.9e-22 109.4 79 75.9
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.9e-22 109.4 78 71.8
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 1.9e-22 109.4 77 75.3
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 1.9e-22 109.4 77 75.3
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.9e-22 109.4 80 71.2
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 4.3e-22 108.2 79 70.9
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 4.3e-22 108.2 79 72.2
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 5.6e-22 107.8 77 71.4
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 1.6e-21 106.3 77 70.1
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 2.1e-21 105.9 77 71.4
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 2.1e-21 105.9 73 75.3
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 2.8e-21 105.5 77 68.8
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 2.8e-21 105.5 76 72.4
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 6.2e-21 104.4 85 64.7
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 1.1e-20 103.6 77 72.7
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.1e-20 103.6 78 69.2
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 1.4e-20 103.2 77 71.4
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.4e-20 103.2 78 69.2
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.8e-20 102.8 79 69.6
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 2.4e-20 102.4 77 67.5
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 2.4e-20 102.4 78 70.5
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 2.4e-20 102.4 79 68.4
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 3.1e-20 102.1 76 69.7
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 4.0e-20 101.7 78 69.2
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 4.0e-20 101.7 79 70.9
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 4.0e-20 101.7 79 70.9
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 4.0e-20 101.7 79 70.9
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 5.3e-20 101.3 79 68.4
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 5.3e-20 101.3 79 68.4
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 9.0e-20 100.5 79 65.8
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 9.0e-20 100.5 79 67.1
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 9.9e-19 97.1 76 68.4
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 9.9e-19 97.1 78 66.7
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.3e-18 96.7 79 65.8
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.7e-18 96.3 76 69.7
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 2.9e-18 95.5 76 67.1
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 2.9e-18 95.5 78 69.2
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 3.8e-18 95.1 75 65.3
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 8.4e-18 94.0 80 66.2
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 1.1e-17 93.6 79 60.8
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 1.1e-17 93.6 76 65.8
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 1.4e-17 93.2 77 62.3
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 1.4e-17 93.2 77 62.3
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 1.4e-17 93.2 77 62.3
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 1.9e-17 92.8 76 63.2
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.9e-17 92.8 76 63.2
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.4e-17 92.4 73 65.8
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 3.2e-17 92.0 76 61.8
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 4.2e-17 91.7 76 61.8
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 4.2e-17 91.7 76 61.8
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 7.1e-17 90.9 76 61.8
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 7.1e-17 90.9 76 60.5
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 7.1e-17 90.9 76 61.8
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 7.1e-17 90.9 76 61.8
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 7.1e-17 90.9 76 60.5
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 2.1e-16 89.4 78 64.1
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 6.0e-16 87.8 79 65.8
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 2.3e-15 85.9 76 63.2
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 3.0e-15 85.5 75 64.0
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 6.7e-15 84.3 76 61.8
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 7.4e-14 80.9 70 60.0
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 9.6e-14 80.5 58 72.4
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.8e-13 79.0 79 57.0
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 9.0e-12 73.9 80 56.2
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 1.5e-11 73.2 76 55.3
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 1.1e-09 67.0 78 53.8
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 5.6e-06 54.7 87 46.0


User provided reference genes

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