Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 1.9e-164 582.4 282 100.0
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 5.4e-71 271.9 125 97.6
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 1.3e-69 267.3 127 91.3
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 5.0e-69 265.4 127 89.0
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 8.6e-69 264.6 126 92.1
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 4.3e-68 262.3 126 89.7
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 5.6e-68 261.9 126 92.1
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 1.2e-67 260.8 131 88.5
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 2.1e-67 260.0 126 88.9
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 2.8e-67 259.6 126 88.9
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 2.8e-67 259.6 167 73.7
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 3.6e-67 259.2 131 87.0
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 4.7e-67 258.8 127 89.0
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 4.7e-67 258.8 130 87.7
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 1.0e-66 257.7 131 87.0
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 1.0e-66 257.7 129 86.0
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 1.0e-66 257.7 126 88.1
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 1.4e-66 257.3 126 87.3
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 1.4e-66 257.3 126 88.1
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 3.1e-66 256.1 130 86.9
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 5.2e-66 255.4 125 88.0
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 5.2e-66 255.4 130 86.2
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 5.2e-66 255.4 130 86.2
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 5.2e-66 255.4 130 86.2
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 6.8e-66 255.0 126 88.1
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 6.8e-66 255.0 127 86.6
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 6.8e-66 255.0 131 85.5
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 8.9e-66 254.6 129 85.3
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 1.2e-65 254.2 125 87.2
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 1.2e-65 254.2 129 85.3
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 1.5e-65 253.8 125 87.2
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 1.5e-65 253.8 125 88.0
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 1.5e-65 253.8 126 88.1
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 3.4e-65 252.7 126 88.1
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 3.4e-65 252.7 126 87.3
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 4.4e-65 252.3 126 87.3
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 5.8e-65 251.9 126 87.3
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 7.5e-65 251.5 127 86.6
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 7.5e-65 251.5 130 84.6
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 7.5e-65 251.5 126 86.5
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 7.5e-65 251.5 126 85.7
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 7.5e-65 251.5 126 85.7
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 9.8e-65 251.1 126 87.3
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 9.8e-65 251.1 126 85.7
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 1.3e-64 250.8 126 87.3
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 1.3e-64 250.8 124 88.7
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 1.7e-64 250.4 126 87.3
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 1.7e-64 250.4 129 84.5
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 2.2e-64 250.0 126 86.5
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 2.2e-64 250.0 126 86.5
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 2.2e-64 250.0 127 85.8
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 2.9e-64 249.6 129 84.5
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 2.9e-64 249.6 127 84.3
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 4.9e-64 248.8 129 83.7
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 6.4e-64 248.4 127 85.8
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 1.1e-63 247.7 126 86.5
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 1.1e-63 247.7 132 85.6
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 1.4e-63 247.3 127 86.6
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 1.9e-63 246.9 134 79.9
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 1.9e-63 246.9 126 86.5
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 3.2e-63 246.1 127 85.8
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 5.4e-63 245.4 126 85.7
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 5.4e-63 245.4 125 84.8
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 5.4e-63 245.4 125 84.8
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 9.2e-63 244.6 124 83.9
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 9.2e-63 244.6 131 84.7
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 9.2e-63 244.6 120 89.2
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 1.2e-62 244.2 126 84.1
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 1.2e-62 244.2 126 84.1
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 1.2e-62 244.2 126 84.1
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 1.2e-62 244.2 126 84.1
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 1.2e-62 244.2 126 84.1
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.5e-62 242.7 126 84.1
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 3.5e-62 242.7 117 90.6
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 6.0e-62 241.9 126 84.9
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 1.0e-61 241.1 126 84.1
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 1.3e-61 240.7 125 84.0
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 1.3e-61 240.7 125 82.4
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 3.9e-61 239.2 125 82.4
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 3.9e-61 239.2 126 82.5
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 6.6e-61 238.4 129 80.6
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 6.6e-61 238.4 126 84.1
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 8.6e-61 238.0 150 74.0
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 1.5e-60 237.3 137 76.6
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 1.5e-60 237.3 122 86.1
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 1.9e-60 236.9 126 83.3
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 3.3e-60 236.1 126 81.7
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 9.5e-60 234.6 158 68.4
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 2.8e-59 233.0 126 79.4
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 3.1e-58 229.6 126 79.4
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 6.8e-58 228.4 121 84.3
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 8.9e-58 228.0 121 84.3
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.2e-57 227.6 123 83.7
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 5.8e-57 225.3 125 79.2
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 1.3e-56 224.2 126 79.4
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 2.9e-56 223.0 119 83.2
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.7e-56 222.6 123 81.3
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 2.7e-54 216.5 116 78.4
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 2.3e-53 213.4 125 75.2
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 8.9e-50 201.4 116 78.4
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 4.1e-47 192.6 94 89.4
Haze_00616 Corylus avellana HOM05D006359 ORTHO05D007871 7.8e-46 188.3 131 71.8
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.0e-45 188.0 95 84.2
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 1.7e-45 187.2 93 89.2
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 1.5e-44 184.1 168 57.1
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 1.9e-44 183.7 126 61.1
Gorai.009G080000 Gossypium raimondii HOM05D006359 ORTHO05D007871 2.5e-44 183.3 126 66.7
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.1e-42 177.9 96 83.3
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 1.4e-42 177.6 126 60.3
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 1.4e-42 177.6 124 60.5
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 2.4e-42 176.8 93 86.0
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 6.8e-42 175.3 92 85.9
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.5e-41 174.1 87 85.1
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.9e-39 167.2 84 89.3
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 9.3e-39 164.9 104 66.3
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-38 162.9 123 56.9
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 3.9e-37 159.5 124 65.3
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 2.5e-36 156.8 78 87.2
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 3.3e-36 156.4 82 85.4
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.6e-35 154.1 111 69.4
Gohir.A05G075800 Gossypium hirsutum HOM05D006359 ORTHO05D007871 5.3e-34 149.1 126 57.1
vmacro23522 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 8.4e-24 115.2 51 100.0
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 1.3e-19 101.3 148 42.6
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 2.0e-17 94.0 140 33.6
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 2.9e-16 90.1 107 45.8
Actinidia33791 Actinidia chinensis HOM05D006359 ORTHO05D007871 2.5e-15 87.0 43 90.7
Haze_26508 Corylus avellana HOM05D006359 ORTHO05D007871 1.2e-09 68.2 89 44.9
PRCOL_00004481 Prasinoderma coloniale HOM05D006359 ORTHO05D007871 8.4e-08 62.0 125 35.2
VMungo1383G0392 Vigna mungo HOM05D006359 ORTHO05D007871 2.1e-06 57.4 28 89.3


User provided reference genes

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