Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.8e-66 255.8 129 100.0
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.0e-32 141.4 159 54.1
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.7e-27 126.3 149 47.7
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.7e-27 125.2 149 47.7
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.1e-26 123.6 150 46.7
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.1e-26 122.1 149 47.0
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 9.2e-26 120.6 157 43.3
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 9.2e-26 120.6 147 46.3
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.6e-25 119.8 159 45.9
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.6e-25 119.8 149 47.0
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.0e-25 119.4 158 43.0
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 2.0e-25 119.4 151 47.0
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 3.5e-25 118.6 150 46.0
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 3.5e-25 118.6 150 45.3
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 4.5e-25 118.2 151 44.4
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 4.5e-25 118.2 150 45.3
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.5e-25 118.2 149 45.6
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 7.8e-25 117.5 150 44.0
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.0e-24 117.1 159 45.3
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 2.9e-24 115.5 159 45.9
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 2.9e-24 115.5 150 46.0
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 2.9e-24 115.5 163 42.3
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 3.8e-24 115.2 151 45.0
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 5.0e-24 114.8 150 43.3
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 5.0e-24 114.8 150 46.0
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 6.6e-24 114.4 142 45.1
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 6.6e-24 114.4 133 47.4
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 6.6e-24 114.4 140 46.4
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 6.6e-24 114.4 151 46.4
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 6.6e-24 114.4 162 42.0
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 8.6e-24 114.0 150 45.3
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 8.6e-24 114.0 150 44.0
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.5e-23 113.2 150 43.3
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.5e-23 113.2 163 41.1
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.5e-23 113.2 163 41.1
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.5e-23 113.2 163 41.1
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 2.5e-23 112.5 153 43.1
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.5e-23 112.5 153 43.1
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 2.5e-23 112.5 150 43.3
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 3.3e-23 112.1 149 43.6
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 7.3e-23 110.9 139 46.8
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 9.5e-23 110.5 150 42.0
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 9.5e-23 110.5 152 41.4
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 1.2e-22 110.2 150 42.7
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.2e-22 110.2 153 42.5
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 2.8e-22 109.0 152 40.8
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 6.1e-22 107.8 149 41.6
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 6.1e-22 107.8 149 41.6
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 6.1e-22 107.8 154 42.9
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 6.1e-22 107.8 150 41.3
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 8.0e-22 107.5 155 41.3
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 8.0e-22 107.5 150 40.7
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 3.0e-21 105.5 150 43.3
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 4.0e-21 105.1 144 41.7
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 8.9e-21 104.0 150 42.7
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 3.4e-20 102.1 149 42.3
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 4.4e-20 101.7 175 37.1
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 9.8e-20 100.5 150 42.0
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.7e-19 99.8 140 40.7
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.7e-19 99.8 150 40.0
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 2.2e-19 99.4 137 43.8
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.2e-19 99.4 150 40.7
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 2.2e-19 99.4 150 38.7
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 2.2e-19 99.4 150 38.7
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 2.2e-19 99.4 149 42.3
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 6.4e-19 97.8 149 39.6
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 6.4e-19 97.8 142 42.3
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 8.3e-19 97.4 145 40.0
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 8.3e-19 97.4 145 40.0
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 8.3e-19 97.4 145 40.0
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 8.3e-19 97.4 145 40.0
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 1.4e-18 96.7 149 40.3
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.4e-18 96.7 145 40.0
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.8e-18 96.3 150 41.3
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 3.2e-18 95.5 145 40.0
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.2e-18 95.5 141 39.0
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 3.2e-18 95.5 158 39.2
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 3.2e-18 95.5 149 40.3
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 4.1e-18 95.1 150 39.3
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 7.0e-18 94.4 153 40.5
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 9.2e-18 94.0 143 38.5
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.2e-17 93.6 150 40.0
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 1.2e-17 93.6 150 39.3
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 3.5e-17 92.0 149 39.6
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 5.9e-17 91.3 149 41.6
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.3e-16 90.1 99 48.5
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.3e-16 90.1 143 39.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.0e-16 89.0 149 37.6
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 5.0e-16 88.2 133 37.6
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.1e-15 87.0 147 37.4
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 2.5e-15 85.9 68 61.8
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 5.6e-15 84.7 129 47.3
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 7.3e-15 84.3 160 34.4
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 7.3e-15 84.3 142 36.6
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 9.5e-15 84.0 156 33.3
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.2e-14 83.6 154 37.0
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.2e-14 83.6 67 59.7
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 2.8e-14 82.4 142 35.9
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 1.4e-13 80.1 149 33.6
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.3e-13 79.3 158 33.5
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.3e-13 79.3 154 36.4
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.1e-13 79.0 118 42.4
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 5.2e-13 78.2 150 34.7
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 3.4e-12 75.5 128 39.1
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 4.4e-12 75.1 150 34.7
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 5.8e-12 74.7 151 34.4
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 6.4e-11 71.2 142 33.1
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 2.4e-10 69.3 127 36.2
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.4e-10 69.3 149 32.2
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.2e-09 67.0 128 35.2
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 3.5e-09 65.5 143 34.3
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.5e-09 65.5 149 34.2
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 3.0e-08 62.4 70 52.9
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 5.0e-08 61.6 99 39.4
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 8.6e-08 60.8 73 43.8
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 1.1e-07 60.5 53 54.7
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 4.3e-07 58.5 160 29.4
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 4.3e-07 58.5 43 58.1
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 5.6e-07 58.2 131 32.1
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.2e-06 57.0 167 28.7
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.7e-06 55.1 36 63.9
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.7e-06 55.1 36 63.9
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 8.1e-06 54.3 73 42.5


User provided reference genes

Program Settings