Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.8e-163 578.6 294 100.0
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.3e-146 521.2 294 90.5
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.0e-109 400.6 292 74.0
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 9.8e-108 394.0 296 71.6
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 8.3e-107 391.0 297 72.1
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-106 390.6 292 72.6
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 5.0e-104 381.7 290 69.0
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 7.3e-103 377.9 307 66.8
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 4.7e-102 375.2 252 76.2
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 6.1e-102 374.8 268 72.8
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 8.0e-102 374.4 291 66.3
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 8.9e-101 370.9 303 67.0
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.2e-100 370.5 267 68.9
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.0e-100 369.8 295 69.2
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 4.4e-100 368.6 291 65.3
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 5.7e-100 368.2 292 67.8
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 9.8e-100 367.5 290 65.2
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 8.3e-99 364.4 304 66.1
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.1e-98 364.0 308 65.9
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 1.4e-98 363.6 296 65.2
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 4.1e-98 362.1 299 64.5
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.0e-98 361.3 304 63.8
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 9.2e-98 360.9 304 63.8
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 9.2e-98 360.9 333 60.4
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 3.5e-97 359.0 304 63.5
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.5e-97 359.0 300 64.0
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.5e-97 359.0 304 63.5
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.5e-97 359.0 292 64.0
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 4.6e-97 358.6 299 65.6
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.9e-96 355.5 300 63.7
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 5.0e-96 355.1 270 70.0
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 6.6e-96 354.8 292 65.8
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 6.6e-96 354.8 306 64.4
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 8.6e-96 354.4 297 63.3
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 9.5e-95 350.9 296 62.2
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.2e-94 350.5 295 65.1
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.1e-94 349.7 296 64.5
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 2.8e-94 349.4 293 62.5
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 3.6e-94 349.0 295 61.7
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 8.0e-94 347.8 303 62.7
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 8.0e-94 347.8 291 60.5
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 3.1e-93 345.9 295 61.0
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 6.8e-93 344.7 291 60.8
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 9.8e-92 340.9 293 63.5
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.2e-91 339.7 294 59.5
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.2e-91 339.7 294 59.5
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 4.9e-91 338.6 295 60.3
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 6.4e-91 338.2 294 62.2
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.9e-90 336.7 292 63.0
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.9e-90 336.7 295 59.3
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 5.4e-90 335.1 294 62.6
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.2e-89 334.0 294 60.9
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.2e-89 334.0 300 59.0
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 2.0e-89 333.2 298 61.4
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 4.6e-89 332.0 297 62.0
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 6.0e-89 331.6 311 59.8
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 2.3e-88 329.7 294 59.9
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.5e-87 326.2 297 61.6
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.5e-87 326.2 259 64.9
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 9.5e-87 324.3 270 64.8
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 2.8e-86 322.8 299 56.2
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 8.1e-86 321.2 304 59.9
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 6.8e-85 318.2 296 56.1
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 8.9e-85 317.8 304 59.2
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 8.9e-85 317.8 299 58.5
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 2.6e-84 316.2 294 58.8
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 3.4e-84 315.8 307 57.7
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 8.3e-83 311.2 284 59.9
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.9e-82 310.1 316 54.7
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 4.1e-82 308.9 304 55.9
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 3.5e-81 305.8 271 60.5
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.0e-80 304.3 271 59.8
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.0e-80 304.3 271 59.8
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.3e-80 303.9 271 59.8
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.3e-80 303.9 271 59.8
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.7e-80 303.5 316 54.7
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 2.3e-80 303.1 271 59.4
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 3.0e-80 302.8 285 58.9
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 5.1e-80 302.0 307 55.7
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 6.6e-80 301.6 304 56.6
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 1.1e-79 300.8 296 55.1
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 1.9e-79 300.1 316 53.8
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 7.3e-79 298.1 296 58.8
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.6e-78 297.0 272 59.2
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.2e-76 290.8 300 57.7
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.5e-76 290.4 265 57.7
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 5.8e-76 288.5 271 57.2
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 4.9e-75 285.4 315 52.4
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 3.2e-74 282.7 264 55.7
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.2e-74 282.7 206 72.8
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 5.4e-74 282.0 257 59.5
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 9.2e-74 281.2 292 56.2
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 2.3e-72 276.6 287 54.4
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 2.5e-71 273.1 292 53.8
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 3.1e-69 266.2 298 52.7
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 1.5e-68 263.8 279 55.2
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.4e-66 256.5 304 49.0
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 9.3e-66 254.6 307 49.2
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.1e-65 253.4 203 67.0
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.1e-62 243.4 291 49.8
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.0e-56 224.6 242 53.3
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 7.4e-55 218.4 230 50.9
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.2e-49 201.1 300 44.3
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.9e-47 193.7 285 42.1
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.8e-45 187.2 304 41.1
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.6e-44 183.3 284 40.1
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 2.6e-44 183.3 188 52.7
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 4.5e-44 182.6 301 39.9
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.3e-43 181.0 271 42.1
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.9e-43 179.9 302 41.1
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 5.5e-42 175.6 142 60.6
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.6e-41 174.1 134 70.9
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.3e-40 171.0 130 68.5
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 4.3e-39 166.0 296 37.5
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 1.2e-33 147.9 120 67.5
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.1e-33 147.1 298 37.9
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 5.1e-32 142.5 177 45.8
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 2.5e-31 140.2 124 61.3
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 5.7e-31 139.0 140 59.3
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.3e-27 127.9 304 34.9
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 6.5e-27 125.6 149 47.7
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 3.6e-25 119.8 121 55.4
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.6e-25 119.8 177 41.2
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.8e-24 117.5 177 40.7
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 8.8e-24 115.2 96 58.3
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 5.3e-21 105.9 91 60.4
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 3.4e-20 103.2 159 42.8
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 7.7e-20 102.1 124 47.6
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 5.5e-18 95.9 97 57.7
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 5.2e-16 89.4 97 45.4
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.8e-14 83.6 94 54.3
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 4.8e-06 56.2 84 38.1
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 8.2e-06 55.5 65 52.3


User provided reference genes

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