Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10081 Vaccinium macrocarpon HOM05D000027 ORTHO05D000066 1.5e-85 319.7 183 100.0
vmacro10082 Vaccinium macrocarpon HOM05D000027 ORTHO05D000066 2.4e-27 126.3 183 47.0
vmacro23090 Vaccinium macrocarpon HOM05D000027 ORTHO05D000066 1.1e-21 107.5 176 40.3
vmacro20785 Vaccinium macrocarpon HOM05D000027 ORTHO05D000066 1.5e-18 97.1 70 62.9
Actinidia02384 Actinidia chinensis HOM05D000027 ORTHO05D000066 6.5e-17 91.7 53 75.5
Lj5A211T83 Lonicera japonica HOM05D000027 ORTHO05D000066 8.4e-17 91.3 70 58.6
Oeu012994.1 Olea europaea HOM05D000027 ORTHO05D000066 9.3e-16 87.8 57 66.7
Lj5A211G80 Lonicera japonica HOM05D000027 ORTHO05D000066 1.2e-15 87.4 70 55.7
Oeu012992.1 Olea europaea HOM05D000027 ORTHO05D000066 2.7e-15 86.3 57 64.9
Cc02_g07160 Coffea canephora HOM05D000027 ORTHO05D000066 4.6e-15 85.5 68 58.8
Oeu050212.1 Olea europaea HOM05D000027 ORTHO05D000066 5.1e-14 82.0 60 65.0
Oeu012990.1 Olea europaea HOM05D000027 ORTHO05D000066 1.5e-13 80.5 81 49.4
Hma1.2p1_1060F.1_g253160 Hydrangea macrophylla HOM05D000027 ORTHO05D000066 1.3e-12 77.4 53 64.2
CSS0050415 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 1.6e-12 77.0 55 60.0
Oeu016807.3 Olea europaea HOM05D000027 ORTHO05D000066 2.2e-12 76.6 53 62.3
Oeu016808.3 Olea europaea HOM05D000027 ORTHO05D000066 3.7e-12 75.9 58 58.6
Lj8A74T65 Lonicera japonica HOM05D000027 ORTHO05D000066 6.3e-12 75.1 55 60.0
Migut.F00729 Erythranthe guttata HOM05D000027 ORTHO05D000066 1.8e-11 73.6 64 53.1
CSS0026979 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 4.1e-11 72.4 52 59.6
CSS0046420 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 4.1e-11 72.4 52 59.6
Peaxi162Scf00611g00220 Petunia axillaris HOM05D000027 ORTHO05D000066 4.1e-11 72.4 80 41.2
Ciclev10031368m.g Citrus clementina HOM05D000027 ORTHO05D000066 5.3e-11 72.0 55 58.2
CSS0034781 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 6.9e-11 71.6 56 55.4
Oeu048001.1 Olea europaea HOM05D000027 ORTHO05D000066 6.9e-11 71.6 48 66.7
vmacro07009 Vaccinium macrocarpon HOM05D000027 ORTHO05D000066 6.9e-11 71.6 71 43.7
Peaxi162Scf00760g00221 Petunia axillaris HOM05D000027 ORTHO05D000066 9.0e-11 71.2 80 41.2
TAR623G0102 Trochodendron aralioides HOM05D000027 ORTHO05D000066 9.0e-11 71.2 60 53.3
TAR623G0352 Trochodendron aralioides HOM05D000027 ORTHO05D000066 9.0e-11 71.2 60 53.3
Atru.chr12.276 Acer truncatum HOM05D000027 ORTHO05D000066 1.5e-10 70.5 55 58.2
Actinidia02896 Actinidia chinensis HOM05D000027 ORTHO05D000066 2.6e-10 69.7 55 49.1
Nitab4.5_0002235g0010 Nicotiana tabacum HOM05D000027 ORTHO05D000066 2.6e-10 69.7 78 41.0
Migut.F00727 Erythranthe guttata HOM05D000027 ORTHO05D000066 3.4e-10 69.3 75 44.0
Nn2g13539 Nelumbo nucifera HOM05D000027 ORTHO05D000066 3.4e-10 69.3 60 53.3
Cfa001390 Carpinus fangiana HOM05D000027 ORTHO05D000066 5.9e-10 68.6 58 53.4
Eucgr.J00976 Eucalyptus grandis HOM05D000027 ORTHO05D000066 5.9e-10 68.6 52 57.7
Nn1g08514 Nelumbo nucifera HOM05D000027 ORTHO05D000066 1.3e-09 67.4 58 53.4
Haze_06468 Corylus avellana HOM05D000027 ORTHO05D000066 1.7e-09 67.0 58 53.4
CSS0041943 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 2.2e-09 66.6 55 50.9
QL08p062249 Quercus lobata HOM05D000027 ORTHO05D000066 2.2e-09 66.6 50 58.0
TAR629G2666 Trochodendron aralioides HOM05D000027 ORTHO05D000066 3.8e-09 65.9 53 58.5
GSVIVG01016411001 Vitis vinifera HOM05D000027 ORTHO05D000066 3.8e-09 65.9 57 56.1
MSTRG.245 Avicennia marina HOM05D000027 ORTHO05D000066 5.0e-09 65.5 53 52.8
ECA238G4088 Erigeron canadensis HOM05D000027 ORTHO05D000066 5.0e-09 65.5 55 50.9
Potri.008G062400 Populus trichocarpa HOM05D000027 ORTHO05D000066 5.0e-09 65.5 51 58.8
Solyc03g078720.4 Solanum lycopersicum HOM05D000027 ORTHO05D000066 5.0e-09 65.5 51 51.0
Sopen03g027450 Solanum pennellii HOM05D000027 ORTHO05D000066 5.0e-09 65.5 51 51.0
Hma1.2p1_0204F.1_g086830 Hydrangea macrophylla HOM05D000027 ORTHO05D000066 6.5e-09 65.1 55 52.7
Hma1.2p1_1060F.1_g253240 Hydrangea macrophylla HOM05D000027 ORTHO05D036410 6.5e-09 65.1 55 52.7
SGA_v2.0_scaffold26G11399 Striga asiatica HOM05D000027 ORTHO05D000066 6.5e-09 65.1 64 56.2
TAR369G1102 Trochodendron aralioides HOM05D000027 ORTHO05D000066 6.5e-09 65.1 60 48.3
Actinidia02895 Actinidia chinensis HOM05D000027 ORTHO05D000066 8.5e-09 64.7 55 50.9
CSS0001680 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 8.5e-09 64.7 66 47.0
Haze_17147 Corylus avellana HOM05D000027 ORTHO05D000066 8.5e-09 64.7 58 51.7
SalBow4G2970 Salvia bowleyana HOM05D000027 ORTHO05D000066 8.5e-09 64.7 53 49.1
CSS0021287 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 1.1e-08 64.3 66 47.0
SalBow6G3753 Salvia bowleyana HOM05D000027 ORTHO05D000066 1.1e-08 64.3 54 51.9
PGSC0003DMG400021689 Solanum tuberosum HOM05D000027 ORTHO05D000066 1.1e-08 64.3 51 52.9
Lj8A74T68 Lonicera japonica HOM05D000027 ORTHO05D000066 1.4e-08 63.9 65 41.5
PGR044G0418 Punica granatum HOM05D000027 ORTHO05D000066 1.4e-08 63.9 55 52.7
SalBow6G0857 Salvia bowleyana HOM05D000027 ORTHO05D000066 1.4e-08 63.9 60 51.7
SalBow6G2890 Salvia bowleyana HOM05D000027 ORTHO05D000066 1.4e-08 63.9 60 51.7
QL08p062318 Quercus lobata HOM05D000027 ORTHO05D000066 1.9e-08 63.5 50 56.0
CSS0034687 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 2.5e-08 63.2 66 45.5
PSO513G0008 Papaver somniferum HOM05D000027 ORTHO05D000066 2.5e-08 63.2 52 57.7
Ciclev10031404m.g Citrus clementina HOM05D000027 ORTHO05D000066 3.2e-08 62.8 55 47.3
Cc02_g07180 Coffea canephora HOM05D000027 ORTHO05D000066 3.2e-08 62.8 56 51.8
HanXRQChr14g0458521 Helianthus annuus HOM05D000027 ORTHO05D000066 3.2e-08 62.8 55 47.3
Oeu035132.1 Olea europaea HOM05D000027 ORTHO05D000066 3.2e-08 62.8 52 53.8
PSO339G0279 Papaver somniferum HOM05D000027 ORTHO05D000066 3.2e-08 62.8 52 55.8
Peaxi162Scf00611g00215 Petunia axillaris HOM05D000027 ORTHO05D000066 3.2e-08 62.8 66 39.4
PGR044G2750 Punica granatum HOM05D000027 ORTHO05D000066 3.2e-08 62.8 55 50.9
SalBow6G5228 Salvia bowleyana HOM05D000027 ORTHO05D000066 3.2e-08 62.8 54 50.0
GSVIVG01016402001 Vitis vinifera HOM05D000027 ORTHO05D000066 3.2e-08 62.8 55 49.1
Hma1.2p1_1060F.1_g253180 Hydrangea macrophylla HOM05D000027 ORTHO05D000066 4.2e-08 62.4 53 54.7
MBI14_g25120_MAGBIO Magnolia biondii HOM05D000027 ORTHO05D000066 4.2e-08 62.4 51 52.9
GSVIVG01016422001 Vitis vinifera HOM05D000027 ORTHO05D000066 4.2e-08 62.4 57 52.6
Cc07_g20330 Coffea canephora HOM05D000027 ORTHO05D000066 7.2e-08 61.6 56 44.6
QL08p062332 Quercus lobata HOM05D000027 ORTHO05D000066 7.2e-08 61.6 50 56.0
unitig_37.g12013 Utricularia gibba HOM05D000027 ORTHO05D000066 7.2e-08 61.6 34 73.5
MSTRG.8982 Avicennia marina HOM05D000027 ORTHO05D000066 1.2e-07 60.8 57 43.9
Eucgr.J00977 Eucalyptus grandis HOM05D000027 ORTHO05D000066 1.2e-07 60.8 52 51.9
Eucgr.J00979 Eucalyptus grandis HOM05D000027 ORTHO05D000066 1.2e-07 60.8 52 51.9
Aqoxy1G00781 Aquilegia oxysepala HOM05D000027 ORTHO05D000066 1.6e-07 60.5 54 48.1
QL08p062365 Quercus lobata HOM05D000027 ORTHO05D000066 1.6e-07 60.5 50 56.0
SalBow5G4147 Salvia bowleyana HOM05D000027 ORTHO05D000066 1.6e-07 60.5 66 42.4
Lj2g0027802 Lotus japonicus HOM05D000027 ORTHO05D000066 2.1e-07 60.1 67 44.8
GSVIVG01016409001 Vitis vinifera HOM05D000027 ORTHO05D000066 2.1e-07 60.1 55 49.1
Gorai.011G275000 Gossypium raimondii HOM05D000027 ORTHO05D000066 2.7e-07 59.7 51 52.9
Nitab4.5_0000143g0300 Nicotiana tabacum HOM05D000027 ORTHO05D000066 2.7e-07 59.7 55 43.6
Peaxi162Scf00611g00126 Petunia axillaris HOM05D000027 ORTHO05D000066 2.7e-07 59.7 54 50.0
Solyc03g078770.3 Solanum lycopersicum HOM05D000027 ORTHO05D000066 2.7e-07 59.7 49 51.0
Hma1.2p1_1060F.1_g253195 Hydrangea macrophylla HOM05D000027 ORTHO05D000066 3.6e-07 59.3 53 52.8
Hma1.2p1_1956F.1_g309020 Hydrangea macrophylla HOM05D000027 ORTHO05D000066 3.6e-07 59.3 53 50.9
Lj1A947T90 Lonicera japonica HOM05D000027 ORTHO05D000066 3.6e-07 59.3 57 49.1
MBI05_g02678_MAGBIO Magnolia biondii HOM05D000027 ORTHO05D000066 3.6e-07 59.3 70 48.6
PSO063G6863 Papaver somniferum HOM05D000027 ORTHO05D000066 3.6e-07 59.3 55 47.3
QL08p062225 Quercus lobata HOM05D000027 ORTHO05D000066 3.6e-07 59.3 50 56.0
QL08p062293 Quercus lobata HOM05D000027 ORTHO05D000066 3.6e-07 59.3 50 54.0
QL08p062359 Quercus lobata HOM05D000027 ORTHO05D000066 3.6e-07 59.3 50 52.0
SGA_v2.0_scaffold2G01053 Striga asiatica HOM05D000027 ORTHO05D000066 3.6e-07 59.3 50 50.0
vmacro23092 Vaccinium macrocarpon HOM05D000027 ORTHO05D000066 3.6e-07 59.3 54 50.0
Actinidia02897 Actinidia chinensis HOM05D000027 ORTHO05D000066 4.6e-07 58.9 66 40.9
CSS0032149 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 4.6e-07 58.9 41 63.4
Cfa001388 Carpinus fangiana HOM05D000027 ORTHO05D000066 4.6e-07 58.9 58 44.8
Haze_17160 Corylus avellana HOM05D000027 ORTHO05D000066 4.6e-07 58.9 58 48.3
QL08p062170 Quercus lobata HOM05D000027 ORTHO05D000066 4.6e-07 58.9 70 45.7
Actinidia02386 Actinidia chinensis HOM05D001002 ORTHO05D000802 6.1e-07 58.5 50 56.0
Cc09_g08150 Coffea canephora HOM05D000027 ORTHO05D000066 6.1e-07 58.5 53 49.1
Lsat_1_v5_gn_2_119861 Lactuca sativa HOM05D000027 ORTHO05D000066 6.1e-07 58.5 55 47.3
Nitab4.5_0012037g0010 Nicotiana tabacum HOM05D000027 ORTHO05D000066 6.1e-07 58.5 51 45.1
PSO063G2243 Papaver somniferum HOM05D000027 ORTHO05D000066 6.1e-07 58.5 55 47.3
EL10Ac4g09736 Beta vulgaris HOM05D000027 ORTHO05D000066 7.9e-07 58.2 70 41.4
ECA233G3773 Erigeron canadensis HOM05D000027 ORTHO05D000066 7.9e-07 58.2 53 45.3
Glyma.01G021700 Glycine max HOM05D000027 ORTHO05D000066 7.9e-07 58.2 70 42.9
Peaxi162Scf00164g00155 Petunia axillaris HOM05D000027 ORTHO05D000066 7.9e-07 58.2 64 42.2
Sed0018929 Sechium edule HOM05D000027 ORTHO05D000066 7.9e-07 58.2 66 47.0
EL10Ac4g09738 Beta vulgaris HOM05D000027 ORTHO05D000066 1.0e-06 57.8 70 41.4
Duzib106G0596 Durio zibethinus HOM05D000027 ORTHO05D000066 1.0e-06 57.8 51 52.9
Sopen03g027440 Solanum pennellii HOM05D000027 ORTHO05D000066 1.0e-06 57.8 49 49.0
Atru.chr12.275 Acer truncatum HOM05D000027 ORTHO05D000066 1.4e-06 57.4 66 42.4
Gohir.D10G239100 Gossypium hirsutum HOM05D000027 ORTHO05D000066 1.4e-06 57.4 51 52.9
Gorai.011G275100 Gossypium raimondii HOM05D000027 ORTHO05D000066 1.4e-06 57.4 51 51.0
Nitab4.5_0002675g0040 Nicotiana tabacum HOM05D000027 ORTHO05D000066 1.4e-06 57.4 51 51.0
PSO832G0986 Papaver somniferum HOM05D000027 ORTHO05D000066 1.4e-06 57.4 55 50.9
SalBow6G3876 Salvia bowleyana HOM05D000027 ORTHO05D000066 1.4e-06 57.4 55 50.9
Cc02_g10310 Coffea canephora HOM05D000027 ORTHO05D000066 1.8e-06 57.0 66 43.9
ECA233G2381 Erigeron canadensis HOM05D000027 ORTHO05D000066 1.8e-06 57.0 50 50.0
Hma1.2p1_1060F.1_g253200 Hydrangea macrophylla HOM05D000027 ORTHO05D000066 1.8e-06 57.0 53 50.9
SalBow5G3434 Salvia bowleyana HOM05D000027 ORTHO05D000066 1.8e-06 57.0 69 36.2
Thecc.10G029400 Theobroma cacao HOM05D000027 ORTHO05D000066 1.8e-06 57.0 51 52.9
unitig_0.g1625 Utricularia gibba HOM05D000027 ORTHO05D000066 1.8e-06 57.0 55 41.8
MD12G1156200 Malus domestica HOM05D000027 ORTHO05D000066 2.3e-06 56.6 53 47.2
Nitab4.5_0002577g0120 Nicotiana tabacum HOM05D000027 ORTHO05D000066 2.3e-06 56.6 53 49.1
PSO832G4294 Papaver somniferum HOM05D000027 ORTHO05D000066 2.3e-06 56.6 55 49.1
SalBow6G5586 Salvia bowleyana HOM05D000027 ORTHO05D000066 2.3e-06 56.6 60 46.7
Actinidia02383 Actinidia chinensis HOM05D000027 ORTHO05D000066 3.0e-06 56.2 64 39.1
HPP92_015343 Vanilla planifolia HOM05D000027 ORTHO05D000066 3.0e-06 56.2 61 39.3
HPP92_026964 Vanilla planifolia HOM05D000027 ORTHO05D000066 3.0e-06 56.2 61 39.3
CiPaw.02G188500 Carya illinoinensis HOM05D000027 ORTHO05D000066 3.9e-06 55.8 51 49.0
Gohir.D10G239000 Gossypium hirsutum HOM05D000027 ORTHO05D000066 3.9e-06 55.8 51 52.9
Hma1.2p1_0204F.1_g086840 Hydrangea macrophylla HOM05D000027 ORTHO05D000066 3.9e-06 55.8 56 42.9
Hma1.2p1_2212F.1_g317210 Hydrangea macrophylla HOM05D000027 ORTHO05D000066 3.9e-06 55.8 56 42.9
Lsat_1_v5_gn_8_14480 Lactuca sativa HOM05D000027 ORTHO05D000066 3.9e-06 55.8 50 46.0
PSO541G3420 Papaver somniferum HOM05D000027 ORTHO05D000066 3.9e-06 55.8 53 49.1
PSO675G7218 Papaver somniferum HOM05D000027 ORTHO05D000066 3.9e-06 55.8 55 47.3
SalBow5G4745 Salvia bowleyana HOM05D000027 ORTHO05D000066 3.9e-06 55.8 68 39.7
GSVIVG01010812001 Vitis vinifera HOM05D000027 ORTHO05D000066 3.9e-06 55.8 51 52.9
GSVIVG01010817001 Vitis vinifera HOM05D000027 ORTHO05D000066 3.9e-06 55.8 51 52.9
Cc07_g19230 Coffea canephora HOM05D000027 ORTHO05D000066 5.1e-06 55.5 53 45.3
Gohir.D10G239500 Gossypium hirsutum HOM05D000027 ORTHO05D000066 5.1e-06 55.5 51 51.0
Gorai.011G275600 Gossypium raimondii HOM05D000027 ORTHO05D000066 5.1e-06 55.5 51 49.0
Nitab4.5_0002675g0030 Nicotiana tabacum HOM05D000027 ORTHO05D000066 5.1e-06 55.5 51 52.9
Nitab4.5_0007038g0020 Nicotiana tabacum HOM05D000027 ORTHO05D000066 5.1e-06 55.5 53 49.1
Ciclev10031408m.g Citrus clementina HOM05D000027 ORTHO05D000066 6.7e-06 55.1 55 47.3
Medtr5g031830 Medicago truncatula HOM05D000027 ORTHO05D000066 6.7e-06 55.1 51 49.0
Oeu034352.1 Olea europaea HOM05D000027 ORTHO05D000066 6.7e-06 55.1 80 36.2
Os07g0486700 Oryza sativa ssp. japonica HOM05D000027 ORTHO05D000066 6.7e-06 55.1 65 41.5
Psat2g095440 Pisum sativum HOM05D000027 ORTHO05D000066 6.7e-06 55.1 51 51.0
GSVIVG01016417001 Vitis vinifera HOM05D000027 ORTHO05D000066 6.7e-06 55.1 51 49.0
CANSAT41G0005 Cannabis sativa HOM05D000027 ORTHO05D000066 8.8e-06 54.7 58 46.6
AUR62000612 Chenopodium quinoa HOM05D000027 ORTHO05D000066 8.8e-06 54.7 70 40.0
Gohir.A10G226800 Gossypium hirsutum HOM05D000027 ORTHO05D000066 8.8e-06 54.7 51 51.0


User provided reference genes

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