Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 5.6e-125 451.1 245 100.0
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 2.1e-103 379.4 264 79.9
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 5.0e-81 305.1 255 72.5
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.8e-73 278.9 255 66.3
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 1.8e-67 260.0 254 65.4
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 9.8e-61 237.7 254 57.9
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 2.2e-60 236.5 249 59.0
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.4e-59 233.8 255 59.2
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 1.6e-58 230.3 254 57.9
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.0e-57 227.6 245 58.0
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.9e-57 226.1 259 57.9
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 4.2e-56 222.2 253 56.5
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.6e-55 220.3 253 55.7
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 8.0e-55 218.0 231 57.6
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 8.0e-55 218.0 256 54.3
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 4.0e-54 215.7 247 55.9
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 7.5e-53 211.5 247 54.7
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.3e-52 210.7 259 52.9
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 1.3e-52 210.7 253 54.9
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 3.7e-52 209.1 228 58.3
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 3.7e-52 209.1 211 60.2
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 4.9e-52 208.8 246 56.5
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.4e-51 206.5 244 55.3
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.4e-51 206.5 244 56.1
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 2.4e-51 206.5 244 55.7
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 7.0e-51 204.9 202 61.4
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.6e-50 203.8 252 54.0
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 6.6e-49 198.4 251 51.8
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 1.1e-48 197.6 253 52.6
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.5e-48 196.4 253 51.0
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 7.3e-48 194.9 251 51.4
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.2e-47 194.1 247 51.4
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.1e-47 193.4 245 51.0
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 3.6e-47 192.6 235 52.8
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 6.1e-47 191.8 235 52.3
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 2.3e-46 189.9 253 50.6
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.3e-46 189.9 260 51.2
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 3.0e-46 189.5 256 51.2
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 4.0e-46 189.1 260 50.8
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 4.0e-46 189.1 260 50.8
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.5e-45 187.2 256 50.4
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 5.7e-45 185.3 252 48.0
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.3e-44 184.1 251 51.0
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.7e-44 183.7 244 49.2
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.7e-44 183.7 249 52.2
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.9e-44 183.0 245 49.4
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 3.7e-44 182.6 252 48.4
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 6.4e-44 181.8 250 50.4
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 6.4e-44 181.8 263 48.7
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 1.8e-43 180.3 253 49.8
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 2.4e-43 179.9 245 50.2
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.4e-43 179.9 248 47.6
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 2.4e-43 179.9 200 56.0
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 1.6e-42 177.2 243 49.4
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 2.0e-42 176.8 251 48.2
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 1.3e-41 174.1 255 46.7
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 5.0e-41 172.2 248 44.8
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 2.5e-40 169.9 211 52.6
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 4.3e-40 169.1 254 47.6
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 5.6e-40 168.7 253 47.8
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 5.6e-40 168.7 249 46.2
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 2.8e-39 166.4 239 49.4
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 3.6e-39 166.0 207 51.7
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 3.6e-39 166.0 253 46.6
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 8.0e-39 164.9 243 44.9
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 3.1e-38 162.9 231 48.1
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 5.2e-38 162.2 249 47.4
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 6.8e-38 161.8 230 47.0
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 4.4e-37 159.1 219 52.1
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 4.9e-36 155.6 105 79.0
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 4.9e-36 155.6 105 79.0
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 8.3e-36 154.8 174 56.3
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.1e-35 154.5 243 46.9
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.4e-35 154.1 248 41.9
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.4e-35 154.1 252 45.6
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 1.9e-35 153.7 253 44.3
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 1.6e-34 150.6 146 61.6
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 1.6e-34 150.6 131 67.9
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 2.7e-34 149.8 257 44.4
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 2.7e-34 149.8 153 59.5
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 4.6e-34 149.1 138 62.3
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 1.7e-33 147.1 170 54.1
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 3.0e-33 146.4 168 53.6
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 3.0e-33 146.4 247 42.9
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 5.0e-33 145.6 146 60.3
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 5.0e-33 145.6 116 68.1
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 5.0e-33 145.6 116 68.1
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 5.0e-33 145.6 116 68.1
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 5.0e-33 145.6 116 68.1
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-32 144.1 146 58.2
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 1.5e-32 144.1 146 58.2
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 1.9e-32 143.7 146 58.2
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 2.5e-32 143.3 146 59.6
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 2.5e-32 143.3 173 52.0
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 3.3e-32 142.9 148 62.8
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 1.2e-31 141.0 221 46.2
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 1.6e-31 140.6 178 50.6
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.6e-31 140.6 142 58.5
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 6.8e-30 135.2 169 53.8
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 4.4e-29 132.5 252 40.9
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 9.9e-29 131.3 184 48.4
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 3.2e-27 126.3 159 53.5
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 9.2e-27 124.8 195 46.2
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 2.7e-26 123.2 133 56.4
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 1.4e-22 110.9 85 65.9
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 2.2e-20 103.6 181 45.3
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 2.3e-17 93.6 188 40.4
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 1.5e-16 90.9 115 47.8
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 2.1e-15 87.0 189 38.1


User provided reference genes

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