Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 0.0e+00 1835.1 892 100.0
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1377.5 900 78.8
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1268.8 903 72.5
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1237.2 940 70.0
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 0.0e+00 1181.0 911 67.2
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1177.5 867 68.9
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1158.7 904 66.2
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1154.8 914 66.2
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1148.7 911 65.8
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1146.3 907 66.3
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1145.2 914 65.8
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1142.1 906 65.9
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1141.7 913 64.8
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1141.7 908 65.5
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1140.6 856 68.1
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1134.8 912 65.0
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1132.1 913 64.3
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1131.3 910 64.9
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1127.5 930 63.2
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1124.8 915 63.8
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1124.0 794 70.7
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1122.8 907 64.7
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1117.8 913 63.4
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1115.9 912 63.7
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1114.4 903 64.2
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1112.1 913 63.2
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1110.9 918 62.7
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1110.1 916 63.0
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1108.6 900 64.1
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1107.4 917 63.8
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1097.4 855 66.0
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1096.3 896 63.6
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1095.1 895 62.8
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1094.3 859 65.0
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1094.3 884 64.0
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1088.2 916 61.9
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1087.4 899 61.8
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1083.2 917 61.7
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1081.6 904 62.1
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1080.9 889 62.2
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1075.8 911 61.5
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1075.5 873 63.3
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 2.4e-311 1072.0 901 61.9
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 5.5e-311 1070.8 855 63.9
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 2.7e-310 1068.5 955 60.9
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 2.7e-310 1068.5 866 63.2
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 6.0e-310 1067.4 924 60.8
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 1.9e-308 1062.4 862 62.5
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 2.8e-307 1058.5 896 61.5
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 6.2e-307 1057.4 858 61.9
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 1.4e-306 1056.2 962 57.9
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 4.0e-306 1054.7 910 60.8
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 1.2e-305 1053.1 994 57.9
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 5.8e-305 1050.8 859 61.8
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 5.8e-305 1050.8 891 61.1
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 2.2e-304 1048.9 919 60.5
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 3.8e-304 1048.1 899 61.8
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 1.2e-302 1043.1 908 59.1
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 1.6e-302 1042.7 868 62.2
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 2.1e-302 1042.3 896 60.5
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 2.1e-302 1042.3 913 59.7
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 2.1e-302 1042.3 883 62.2
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 3.0e-301 1038.5 919 59.7
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 3.0e-301 1038.5 875 62.6
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 8.7e-301 1036.9 853 62.0
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 4.3e-300 1034.6 860 61.7
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 2.1e-299 1032.3 911 58.9
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 2.8e-299 1031.9 896 59.7
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 2.4e-298 1028.9 909 59.6
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 3.1e-298 1028.5 918 58.8
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 4.1e-298 1028.1 926 58.9
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 5.9e-297 1024.2 905 59.9
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 5.9e-297 1024.2 905 59.9
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 4.2e-295 1018.1 909 58.5
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 5.5e-295 1017.7 842 63.1
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 7.2e-295 1017.3 907 60.7
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 4.3e-292 1008.1 859 59.4
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 2.8e-291 1005.4 734 69.1
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 6.9e-290 1000.7 915 58.4
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 8.8e-285 983.8 913 57.5
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 1.5e-284 983.0 929 55.4
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 1.5e-281 973.0 913 58.6
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 6.1e-278 961.1 870 58.9
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 1.0e-277 960.3 678 69.5
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 1.5e-276 956.4 869 58.6
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 1.7e-275 953.0 775 61.4
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 4.5e-273 944.9 733 64.8
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 7.2e-271 937.6 894 54.9
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 1.5e-268 929.9 842 57.2
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 4.4e-268 928.3 786 63.2
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 5.3e-266 921.4 915 56.2
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 2.1e-262 909.4 896 53.9
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.8e-258 896.3 754 62.2
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 8.0e-254 880.9 821 58.0
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.3e-235 820.5 743 60.6
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 1.6e-233 813.5 760 58.3
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 7.6e-220 768.1 899 46.1
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 7.3e-215 751.5 896 45.3
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 1.6e-209 733.8 874 45.2
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.0e-208 731.1 840 49.6
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 4.8e-206 722.2 783 48.1
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 4.9e-187 659.1 483 69.2
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 1.1e-175 621.3 519 64.7
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 1.0e-168 598.2 600 48.0
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 1.2e-145 521.5 752 39.1
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 1.7e-142 511.1 799 38.2
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 5.8e-127 459.5 578 46.7
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.4e-117 428.3 271 79.3
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 3.4e-111 407.1 270 76.7
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 1.3e-107 395.2 392 56.4
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.6e-103 380.9 382 53.7
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 3.2e-93 347.4 246 63.4
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 9.6e-90 335.9 197 78.2
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.1e-89 334.7 188 81.4
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 2.8e-89 334.3 244 65.6
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.4e-88 332.0 186 81.7
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 7.1e-85 319.7 217 67.3
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 5.5e-77 293.5 201 64.7
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 5.1e-67 260.4 453 35.1
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.2e-55 222.6 147 66.7
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 8.0e-44 183.3 131 59.5
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 5.0e-38 164.1 167 53.3
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 4.4e-26 124.4 171 46.2
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 5.0e-22 110.9 68 83.8
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 7.5e-10 70.5 108 41.7
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 3.2e-08 65.1 91 45.1
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 1.2e-07 63.2 219 31.1


User provided reference genes

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