Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09992 Vaccinium macrocarpon HOM05D000518 ORTHO05D426948 5.1e-93 344.4 168 100.0
vmacro09991 Vaccinium macrocarpon HOM05D000518 ORTHO05D001974 4.5e-17 92.0 107 53.3
Rhsim09G0181600 Rhododendron simsii HOM05D000518 ORTHO05D000562 1.9e-15 86.7 104 51.0
Dinv10573 Davidia involucrata HOM05D000518 ORTHO05D001974 8.9e-13 77.8 105 46.7
CANSAT56G3978 Cannabis sativa HOM05D000518 ORTHO05D001974 3.7e-11 72.4 98 45.9
Nitab4.5_0002854g0100 Nicotiana tabacum HOM05D000518 ORTHO05D001974 1.4e-10 70.5 76 52.6
Haze_17297 Corylus avellana HOM05D000518 ORTHO05D001974 3.2e-10 69.3 73 52.1
Ca_20872_v3 Cicer arietinum L. HOM05D000127 ORTHO05D000243 4.1e-10 68.9 103 40.8
Medtr5g083530 Medicago truncatula HOM05D000518 ORTHO05D001974 4.1e-10 68.9 101 40.6
Atru.chr12.121 Acer truncatum HOM05D000518 ORTHO05D001974 5.4e-10 68.6 98 43.9
Potri.008G074500 Populus trichocarpa HOM05D000518 ORTHO05D001974 5.4e-10 68.6 98 43.9
Oeu008085.1 Olea europaea HOM05D000518 ORTHO05D001974 7.0e-10 68.2 102 42.2
TPR.G30431 Trifolium pratense HOM05D000518 ORTHO05D001974 1.6e-09 67.0 101 40.6
PSO339G5076 Papaver somniferum HOM05D000518 ORTHO05D001974 2.0e-09 66.6 99 42.4
QL08p064032 Quercus lobata HOM05D000518 ORTHO05D001974 2.0e-09 66.6 98 42.9
MSTRG.27295 Avicennia marina HOM05D000518 ORTHO05D001974 4.6e-09 65.5 102 39.2
CiPaw.01G302700 Carya illinoinensis HOM05D000518 ORTHO05D001974 4.6e-09 65.5 98 41.8
Ciclev10032371m.g Citrus clementina HOM05D000518 ORTHO05D001974 4.6e-09 65.5 110 40.9
CAN.G19.3 Capsicum annuum HOM05D000518 ORTHO05D001974 5.9e-09 65.1 101 39.6
Duzib168G0386 Durio zibethinus HOM05D000518 ORTHO05D001974 5.9e-09 65.1 105 39.0
Lalb_Chr17g0346971 Lupinus albus HOM05D000518 ORTHO05D001974 5.9e-09 65.1 100 42.0
Oeu008082.1 Olea europaea HOM05D000518 ORTHO05D001974 5.9e-09 65.1 102 40.2
Cfa001254 Carpinus fangiana HOM05D000518 ORTHO05D001974 7.8e-09 64.7 73 50.7
TAR623G0069 Trochodendron aralioides HOM05D000518 ORTHO05D001974 7.8e-09 64.7 98 40.8
VMungo1383G2258 Vigna mungo HOM05D000518 ORTHO05D001974 1.0e-08 64.3 100 39.0
PSO384G2604 Papaver somniferum HOM05D000518 ORTHO05D001974 1.7e-08 63.5 99 41.4
Peaxi162Scf00284g00230 Petunia axillaris HOM05D000518 ORTHO05D001974 1.7e-08 63.5 121 37.2
Sopen06g016200 Solanum pennellii HOM05D000518 ORTHO05D001974 1.7e-08 63.5 101 38.6
PGSC0003DMG400023957 Solanum tuberosum HOM05D000518 ORTHO05D001974 1.7e-08 63.5 101 38.6
Ca_15170_v3 Cicer arietinum L. HOM05D000518 ORTHO05D001974 2.3e-08 63.2 101 40.6
GSVIVG01032734001 Vitis vinifera HOM05D000518 ORTHO05D001974 2.3e-08 63.2 98 43.9
Manes.07G136033 Manihot esculenta HOM05D000518 ORTHO05D001974 3.0e-08 62.8 93 43.0
SGA_v2.0_scaffold60G20945 Striga asiatica HOM05D000127 ORTHO05D000243 3.0e-08 62.8 99 40.4
Cc02_g05870 Coffea canephora HOM05D000518 ORTHO05D001974 3.9e-08 62.4 96 40.6
Phvul.001G247200 Phaseolus vulgaris HOM05D000518 ORTHO05D001974 5.0e-08 62.0 100 38.0
Solyc06g050630.3 Solanum lycopersicum HOM05D000518 ORTHO05D001974 5.0e-08 62.0 101 37.6
arahy.Tifrunner.gnm1.ann1.0LDE9J Arachis hypogaea HOM05D000518 ORTHO05D001974 8.6e-08 61.2 100 38.0
arahy.Tifrunner.gnm1.ann1.GA90U3 Arachis hypogaea HOM05D000518 ORTHO05D001974 8.6e-08 61.2 100 38.0
HanXRQChr14g0458801 Helianthus annuus HOM05D000518 ORTHO05D001974 8.6e-08 61.2 100 38.0
Thecc.09G230500 Theobroma cacao HOM05D000518 ORTHO05D001974 8.6e-08 61.2 105 38.1
arahy.Tifrunner.gnm1.ann1.LX7WDF Arachis hypogaea HOM05D000518 ORTHO05D001974 1.9e-07 60.1 100 41.0
Eucgr.J00162 Eucalyptus grandis HOM05D000518 ORTHO05D001974 2.5e-07 59.7 98 39.8
Medtr3g071980 Medicago truncatula HOM05D000518 ORTHO05D001974 2.5e-07 59.7 101 38.6
TPR.G35648 Trifolium pratense HOM05D000518 ORTHO05D001974 3.3e-07 59.3 101 38.6
TWI53G2096 Tripterygium wilfordii HOM05D000518 ORTHO05D001974 3.3e-07 59.3 96 37.5
Gohir.A09G114900 Gossypium hirsutum HOM05D000518 ORTHO05D001974 4.3e-07 58.9 98 37.8
Gohir.D09G111600 Gossypium hirsutum HOM05D000518 ORTHO05D001974 4.3e-07 58.9 98 37.8
Gorai.006G129300 Gossypium raimondii HOM05D000518 ORTHO05D001974 4.3e-07 58.9 98 37.8
Psat5g132280 Pisum sativum HOM05D000518 ORTHO05D001974 4.3e-07 58.9 97 39.2
COL.COLO4_24868 Corchorus olitorius HOM05D000518 ORTHO05D001974 9.5e-07 57.8 98 39.8
Psat5g126080 Pisum sativum HOM05D000518 ORTHO05D001974 9.5e-07 57.8 97 38.1
Lj8C60T2 Lonicera japonica HOM05D000518 ORTHO05D001974 1.6e-06 57.0 32 81.2
Migut.F00619 Erythranthe guttata HOM05D000518 ORTHO05D001974 2.1e-06 56.6 98 34.7
Actinidia00653 Actinidia chinensis HOM05D000518 ORTHO05D001974 3.6e-06 55.8 61 52.5
Lsat_1_v5_gn_2_125800 Lactuca sativa HOM05D000518 ORTHO05D001974 3.6e-06 55.8 37 73.0
SalBow3G4205 Salvia bowleyana HOM05D000518 ORTHO05D001974 4.7e-06 55.5 32 78.1
PGR044G2339 Punica granatum HOM05D000518 ORTHO05D001974 8.0e-06 54.7 99 35.4


User provided reference genes

Program Settings