Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 6.6e-285 983.4 512 100.0
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 2.1e-238 828.9 527 86.1
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 5.9e-217 757.7 516 80.0
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 1.7e-216 756.1 518 79.7
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 2.7e-198 695.7 512 74.0
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 5.2e-197 691.4 511 73.8
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 7.7e-193 677.6 502 72.9
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 1.0e-192 677.2 506 72.5
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 1.2e-190 670.2 506 71.9
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 1.6e-190 669.8 507 72.0
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 6.1e-190 667.9 507 71.8
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 4.0e-189 665.2 503 71.4
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 5.2e-189 664.8 522 69.9
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 8.8e-189 664.1 512 70.9
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 2.6e-188 662.5 512 71.1
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 4.8e-187 658.3 503 70.6
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 4.8e-187 658.3 507 70.4
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 8.3e-187 657.5 511 70.1
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 2.4e-186 656.0 508 70.1
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 4.1e-186 655.2 504 70.8
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 7.0e-186 654.4 508 72.8
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 1.2e-185 653.7 506 71.1
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 1.6e-185 653.3 503 70.0
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 2.0e-185 652.9 510 70.0
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 1.7e-184 649.8 515 68.7
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 8.5e-184 647.5 506 70.6
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 5.5e-183 644.8 517 69.6
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 7.2e-183 644.4 512 68.8
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 3.0e-181 639.0 515 69.1
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 6.8e-181 637.9 518 68.3
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 4.4e-180 635.2 513 69.2
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 6.3e-179 631.3 515 67.2
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 8.3e-179 630.9 503 68.2
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 1.8e-178 629.8 515 66.8
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 2.4e-178 629.4 511 66.5
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 2.4e-178 629.4 511 66.5
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 1.6e-177 626.7 514 66.7
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 5.9e-177 624.8 509 66.8
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 1.3e-176 623.6 492 69.1
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 2.5e-175 619.4 509 67.2
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 2.1e-174 616.3 513 66.5
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 6.1e-174 614.8 575 62.8
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 1.4e-173 613.6 503 67.4
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 1.8e-173 613.2 507 66.1
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 1.2e-172 610.5 501 66.9
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 5.7e-172 608.2 501 67.1
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 5.7e-172 608.2 512 65.4
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 9.8e-172 607.4 505 65.3
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 1.3e-171 607.1 509 65.2
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 1.7e-171 606.7 508 65.9
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 2.2e-171 606.3 515 65.0
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 3.7e-171 605.5 501 66.7
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 1.1e-170 604.0 509 65.2
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 2.4e-170 602.8 501 64.7
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 9.2e-170 600.9 506 65.8
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 9.2e-170 600.9 508 66.1
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 2.7e-169 599.4 515 64.5
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 3.5e-169 599.0 493 67.3
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 1.1e-167 594.0 514 66.5
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 1.5e-167 593.6 507 63.7
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 1.5e-167 593.6 504 65.3
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 3.3e-167 592.4 512 64.5
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 6.8e-165 584.7 512 63.7
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 2.0e-164 583.2 449 73.1
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 3.4e-164 582.4 528 61.6
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 1.9e-162 576.6 533 61.0
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 6.6e-160 568.2 499 62.7
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 8.6e-160 567.8 508 63.6
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.1e-159 567.4 561 59.2
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 1.6e-158 563.5 471 66.9
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 1.4e-157 560.5 469 68.2
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 3.1e-157 559.3 423 73.0
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 2.7e-153 546.2 485 65.4
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 2.7e-153 546.2 508 59.3
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 3.3e-151 539.3 511 57.9
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 6.2e-150 535.0 407 72.2
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.1e-149 534.3 468 64.5
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 3.1e-149 532.7 505 61.0
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.6e-148 529.6 464 64.9
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 3.5e-145 519.2 525 57.7
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 6.2e-142 508.4 494 60.9
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 6.2e-142 508.4 480 60.4
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 8.4e-139 498.0 449 63.0
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 1.6e-137 493.8 502 58.4
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 8.7e-136 488.0 484 58.5
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 1.7e-123 447.2 367 65.4
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 2.9e-123 446.4 364 69.8
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 8.7e-112 408.3 356 62.9
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.4e-101 373.6 506 48.6
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 5.5e-98 362.5 294 67.7
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 1.4e-93 347.8 513 43.3
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 2.4e-93 347.1 394 51.8
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 1.7e-91 340.9 253 72.3
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 1.1e-87 328.2 295 62.0
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 3.3e-79 300.1 253 66.4
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 7.2e-74 282.3 249 63.5
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 6.3e-70 269.2 242 65.7
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 2.0e-63 247.7 260 53.1
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.1e-58 231.9 183 68.3
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 1.2e-57 228.4 212 61.3
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 2.7e-52 210.7 181 66.3
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 1.3e-51 208.4 168 66.1
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 1.1e-45 188.7 168 61.9
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 3.4e-39 167.2 144 66.0
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 4.6e-36 156.8 166 54.8
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 1.2e-31 142.1 504 28.4
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.2e-31 142.1 161 52.2
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 4.9e-30 136.7 90 78.9
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 1.1e-29 135.6 92 81.5
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 5.4e-29 133.3 106 72.6
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 8.7e-27 125.9 106 69.8
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.1e-24 119.0 77 79.2
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 2.1e-20 104.8 64 76.6
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 3.5e-20 104.0 99 58.6
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 3.9e-19 100.5 87 66.7
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 9.0e-16 89.4 86 61.6
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 4.5e-15 87.0 59 78.0
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 9.9e-15 85.9 57 77.2
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 2.1e-09 68.2 45 66.7
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 2.6e-07 61.2 104 43.3


User provided reference genes

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