Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 7.1e-202 707.2 402 100.0
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 1.7e-171 606.3 379 86.3
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 3.9e-139 498.8 379 71.0
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 2.3e-136 489.6 383 68.4
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 1.5e-135 486.9 382 68.8
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 2.4e-133 479.6 382 68.6
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 1.9e-122 443.4 371 63.9
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 6.4e-118 428.3 382 64.7
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.9e-117 426.8 371 63.3
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 4.1e-117 425.6 376 64.1
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 1.0e-115 421.0 380 63.7
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 1.3e-115 420.6 383 62.7
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 3.9e-115 419.1 376 63.0
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 5.1e-115 418.7 376 63.0
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 5.6e-114 415.2 379 60.2
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 1.5e-111 407.1 379 59.9
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 5.4e-109 398.7 376 59.8
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 7.8e-108 394.8 376 59.0
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 2.3e-107 393.3 376 59.6
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 3.9e-107 392.5 377 59.7
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 3.9e-107 392.5 337 63.8
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 2.5e-106 389.8 394 56.1
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 5.6e-106 388.7 406 55.9
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 3.6e-105 386.0 382 58.1
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 3.6e-105 386.0 377 57.6
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 6.2e-105 385.2 245 78.4
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 1.4e-104 384.0 393 56.7
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 4.0e-104 382.5 286 68.9
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 6.9e-104 381.7 286 68.9
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 2.0e-103 380.2 397 56.7
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 2.0e-103 380.2 382 57.1
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 2.6e-103 379.8 347 59.1
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 2.6e-103 379.8 223 80.7
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 2.6e-103 379.8 260 73.8
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 2.6e-103 379.8 280 70.0
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 9.9e-103 377.9 387 56.3
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 1.3e-102 377.5 368 57.9
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 4.9e-102 375.6 381 55.4
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 6.4e-102 375.2 382 55.8
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 1.4e-101 374.0 248 74.2
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 3.2e-101 372.9 341 60.4
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 9.3e-101 371.3 358 56.4
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 9.3e-101 371.3 358 56.4
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 1.2e-100 370.9 384 54.9
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 1.2e-100 370.9 380 56.1
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 2.1e-100 370.2 384 54.7
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 3.5e-100 369.4 388 55.4
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 4.6e-100 369.0 348 57.5
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 4.6e-100 369.0 314 62.7
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 4.6e-100 369.0 220 80.9
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 6.0e-100 368.6 223 79.4
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 6.0e-100 368.6 374 55.9
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 6.0e-100 368.6 374 55.9
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 1.0e-99 367.9 368 55.4
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 1.0e-99 367.9 267 69.7
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 1.3e-99 367.5 351 58.4
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 1.8e-99 367.1 384 54.9
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 1.8e-99 367.1 290 64.5
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 1.8e-99 367.1 374 55.6
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 1.8e-99 367.1 397 53.9
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 3.0e-99 366.3 387 55.0
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 3.0e-99 366.3 374 55.3
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 5.1e-99 365.5 247 73.7
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 6.7e-99 365.2 223 80.3
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 6.7e-99 365.2 223 80.3
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 8.7e-99 364.8 293 64.2
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 1.1e-98 364.4 222 78.8
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 1.5e-98 364.0 223 78.0
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 2.5e-98 363.2 350 57.1
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 2.5e-98 363.2 345 58.0
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 2.5e-98 363.2 350 57.1
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 4.3e-98 362.5 254 70.9
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 4.3e-98 362.5 214 81.3
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 4.3e-98 362.5 391 53.5
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 9.6e-98 361.3 221 77.4
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 1.3e-97 360.9 246 72.0
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 1.3e-97 360.9 246 72.0
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.6e-97 360.5 222 77.9
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 1.6e-97 360.5 223 78.0
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 2.1e-97 360.1 339 59.6
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 2.8e-97 359.8 390 53.1
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.8e-97 359.8 246 71.5
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 2.8e-97 359.8 220 79.1
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 2.8e-97 359.8 324 59.0
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 3.6e-97 359.4 222 77.9
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 3.6e-97 359.4 222 77.9
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 4.8e-97 359.0 290 63.4
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 4.8e-97 359.0 412 52.2
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 4.8e-97 359.0 357 56.0
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 6.2e-97 358.6 389 53.7
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 6.2e-97 358.6 297 62.3
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 8.1e-97 358.2 215 79.5
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 1.1e-96 357.8 362 55.0
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 4.0e-96 355.9 250 71.6
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 5.8e-95 352.1 327 58.7
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 7.6e-95 351.7 351 56.4
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 7.6e-95 351.7 351 56.4
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 2.2e-94 350.1 223 75.8
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 6.4e-94 348.6 378 54.0
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 1.1e-93 347.8 223 74.4
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 3.2e-93 346.3 191 86.9
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 3.2e-93 346.3 379 52.5
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 7.1e-93 345.1 223 73.1
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 1.2e-92 344.4 222 74.3
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.2e-92 344.4 222 74.3
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 1.6e-92 344.0 214 76.6
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 7.9e-92 341.7 290 58.6
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 9.0e-88 328.2 179 89.9
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 4.5e-87 325.9 222 70.7
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 4.2e-85 319.3 324 59.9
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 9.3e-85 318.2 221 67.9
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 9.3e-85 318.2 215 69.8
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.6e-84 317.4 214 75.7
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 2.3e-83 313.5 177 84.2
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 1.1e-82 311.2 215 67.9
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 1.0e-78 298.1 178 79.8
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 2.9e-78 296.6 349 50.4
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.2e-76 291.2 219 63.5
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 3.6e-76 289.7 220 62.7
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 2.3e-75 287.0 220 62.3
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 7.7e-71 271.9 195 69.2
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 8.5e-70 268.5 349 47.9
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 8.5e-70 268.5 166 78.9
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 1.8e-64 250.8 150 77.3
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 7.2e-61 238.8 132 84.1
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 6.1e-60 235.7 148 75.0
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 3.8e-54 216.5 130 76.2
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 7.2e-53 212.2 215 47.4
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.7e-52 210.3 215 47.0
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 9.7e-50 201.8 378 39.2
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 2.7e-47 193.7 394 37.8
Actinidia31642 Actinidia chinensis HOM05D004331 ORTHO05D004984 3.4e-42 176.8 166 61.4
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 5.7e-42 176.0 374 37.2
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 1.4e-40 171.4 102 76.5
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 1.4e-40 171.4 102 77.5
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 1.8e-40 171.0 266 36.8
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 3.1e-40 170.2 100 77.0
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 5.4e-40 169.5 225 40.4
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 1.2e-39 168.3 102 75.5
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 1.2e-39 168.3 102 75.5
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 1.6e-39 167.9 100 76.0
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 2.0e-39 167.5 102 75.5
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 2.0e-39 167.5 102 75.5
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 2.7e-39 167.2 354 36.4
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 1.3e-38 164.9 102 73.5
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 1.3e-38 164.9 102 73.5
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 1.7e-38 164.5 100 75.0
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 1.5e-34 151.4 158 53.8
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 3.8e-30 136.7 118 61.9
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 2.3e-27 127.5 74 81.1
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 2.3e-27 127.5 74 81.1
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 2.3e-27 127.5 74 81.1
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 3.0e-27 127.1 102 60.8
MBI15_g10655_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 1.5e-26 124.8 78 76.9
CiPaw.01G307900 Carya illinoinensis HOM05D004331 ORTHO05D004984 8.3e-25 119.0 177 45.8
AUR62030577 Chenopodium quinoa HOM05D004331 ORTHO05D004984 3.2e-24 117.1 144 50.0
Ah.10g029620 Amaranthus hybridus HOM05D004331 ORTHO05D004984 2.0e-23 114.4 233 38.2
Zm00001eb123190 Zea mays HOM05D004331 ORTHO05D004984 1.3e-22 111.7 74 71.6
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 1.9e-21 107.8 63 79.4
Eucgr.G03162 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.9e-21 107.8 241 36.5
MCO04G099 Micromonas commoda HOM05D004331 ORTHO05D004984 1.6e-20 104.8 185 32.4
SHI31865 Sapria himalayana HOM05D004331 ORTHO05D004984 4.0e-19 100.1 142 41.5
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 5.2e-19 99.8 58 75.9
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 2.2e-17 94.4 55 78.2
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 1.1e-13 82.0 51 70.6
C08p13890 Brassica napus HOM05D013285 ORTHO05D004984 4.3e-13 80.1 48 83.3
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 1.2e-12 78.6 44 81.8
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 1.1e-11 75.5 68 55.9


User provided reference genes

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