Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 3.0e-143 511.9 275 100.0
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 4.3e-81 305.4 209 76.6
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 1.6e-80 303.5 213 74.6
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 4.4e-78 295.4 206 78.6
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 4.4e-78 295.4 215 72.1
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 9.9e-78 294.3 227 67.4
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 1.3e-77 293.9 204 76.0
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 2.9e-77 292.7 215 69.8
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 4.9e-77 292.0 212 68.9
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 8.4e-77 291.2 212 68.9
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 8.4e-77 291.2 209 78.0
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 1.1e-76 290.8 212 68.9
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 3.2e-76 289.3 212 79.7
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 2.1e-75 286.6 209 68.9
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 2.7e-75 286.2 208 68.8
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 3.5e-75 285.8 208 76.9
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 4.6e-75 285.4 208 73.6
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 6.0e-75 285.0 208 74.0
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 1.0e-74 284.3 208 75.5
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 1.3e-74 283.9 209 69.4
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 6.6e-74 281.6 212 70.8
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 1.9e-73 280.0 210 68.6
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 2.5e-73 279.6 209 75.1
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 4.3e-73 278.9 208 74.5
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 4.3e-73 278.9 208 67.8
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 7.3e-73 278.1 207 70.0
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 9.6e-73 277.7 209 68.9
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 1.2e-72 277.3 209 68.4
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 1.6e-72 276.9 209 67.5
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 2.1e-72 276.6 209 75.1
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 2.1e-72 276.6 208 68.8
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 2.8e-72 276.2 208 67.3
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 3.6e-72 275.8 211 74.4
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 6.2e-72 275.0 210 79.0
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 1.1e-71 274.2 211 68.2
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.4e-71 273.1 209 67.0
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 2.4e-71 273.1 210 72.4
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 3.1e-71 272.7 214 66.8
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 3.1e-71 272.7 192 80.2
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 6.8e-71 271.6 210 67.1
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 8.9e-71 271.2 212 71.2
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 1.2e-70 270.8 212 67.5
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.5e-70 270.4 213 65.3
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 2.0e-70 270.0 208 66.8
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 2.0e-70 270.0 208 68.8
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 3.4e-70 269.2 206 66.0
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.4e-70 268.9 214 65.0
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 4.4e-70 268.9 208 66.3
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 4.4e-70 268.9 214 65.9
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 5.8e-70 268.5 192 78.1
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 7.6e-70 268.1 212 65.6
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 7.6e-70 268.1 213 75.1
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 7.6e-70 268.1 191 79.1
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 7.6e-70 268.1 206 76.7
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 9.9e-70 267.7 209 72.2
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 9.9e-70 267.7 209 72.2
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 9.9e-70 267.7 208 74.5
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 1.7e-69 266.9 210 65.2
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 1.7e-69 266.9 210 65.7
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 3.8e-69 265.8 218 73.4
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 3.8e-69 265.8 214 72.4
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 6.4e-69 265.0 212 72.6
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 8.4e-69 264.6 213 68.1
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 1.1e-68 264.2 211 76.8
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 1.1e-68 264.2 216 74.1
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 2.4e-68 263.1 211 64.0
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 2.4e-68 263.1 209 71.8
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 3.2e-68 262.7 205 65.9
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 4.2e-68 262.3 210 71.4
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 5.4e-68 261.9 210 70.0
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 5.4e-68 261.9 202 76.2
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 7.1e-68 261.5 209 72.7
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 1.2e-67 260.8 210 64.3
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 2.1e-67 260.0 210 71.9
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 3.5e-67 259.2 189 79.4
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 4.6e-67 258.8 208 73.6
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 6.0e-67 258.5 210 71.9
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 6.0e-67 258.5 202 74.3
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 7.8e-67 258.1 199 77.9
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 7.8e-67 258.1 202 70.3
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 7.8e-67 258.1 208 75.0
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 7.8e-67 258.1 208 75.0
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 1.3e-66 257.3 208 62.5
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 1.7e-66 256.9 226 63.7
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 2.3e-66 256.5 209 71.8
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 3.0e-66 256.1 204 75.0
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 3.9e-66 255.8 197 76.1
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 6.6e-66 255.0 211 73.0
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 2.5e-65 253.1 209 71.3
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 5.6e-65 251.9 206 67.0
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 1.6e-64 250.4 213 73.2
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 2.1e-64 250.0 230 59.6
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 3.6e-64 249.2 214 69.6
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 4.0e-63 245.7 226 57.5
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 4.4e-62 242.3 191 76.4
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 2.9e-61 239.6 151 76.8
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.9e-61 239.6 151 76.8
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 4.9e-61 238.8 194 64.9
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 1.1e-60 237.7 152 75.7
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 1.9e-60 236.9 212 65.1
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.2e-60 236.1 151 76.2
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 5.4e-60 235.3 195 63.6
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 2.1e-59 233.4 200 74.5
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 4.6e-59 232.3 217 66.4
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 6.0e-59 231.9 196 61.7
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.1e-57 227.6 151 73.5
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 5.6e-57 225.3 198 68.2
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 9.6e-57 224.6 158 77.2
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 5.3e-55 218.8 130 77.7
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 1.5e-54 217.2 119 81.5
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 9.3e-52 208.0 225 50.7
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 2.7e-51 206.5 128 75.8
AUR62015003 Chenopodium quinoa HOM05D005916 ORTHO05D007168 1.0e-50 204.5 107 87.9
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 1.1e-49 201.1 134 70.1
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 1.1e-47 194.5 199 63.8
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 3.1e-47 193.0 126 73.0
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 3.4e-46 189.5 91 93.4
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 4.5e-46 189.1 162 61.7
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 4.5e-46 189.1 95 89.5
Actinidia31761 Actinidia chinensis HOM05D005916 ORTHO05D007168 1.2e-43 181.0 213 59.2
SMO197G0072 Selaginella moellendorffii HOM05D005916 ORTHO05D007168 7.9e-35 151.8 82 82.9
Actinidia01032 Actinidia chinensis HOM05D005916 ORTHO05D007168 8.7e-34 148.3 216 56.5
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 5.0e-29 132.5 127 70.1
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 5.5e-28 129.0 108 53.7
unitig_90.g27553 Utricularia gibba HOM05D005916 ORTHO05D007168 6.1e-27 125.6 129 54.3
Dinv34527 Davidia involucrata HOM05D005916 ORTHO05D007168 2.5e-25 120.2 59 89.8
MCO04G185 Micromonas commoda HOM05D005916 ORTHO05D007168 1.3e-21 107.8 100 51.0
Pp3c13_24550 Physcomitrium patens HOM05D005916 ORTHO05D007168 1.6e-19 100.9 107 45.8
CBR_g3263 Chara braunii HOM05D000019 ORTHO05D000353 5.7e-17 92.4 107 45.8
FAN21G1143 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.5e-12 77.8 63 60.3
Cre12.g520850 Chlamydomonas reinhardtii HOM05D005916 ORTHO05D007168 2.1e-11 73.9 120 35.8
SalBow2G0368 Salvia bowleyana HOM05D005916 ORTHO05D007168 4.7e-11 72.8 37 86.5
Solyc03g094070.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 1.4e-10 71.2 85 45.9
FAN11G3144 Fragaria x ananassa HOM05D005916 ORTHO05D007168 5.7e-09 65.9 106 44.3
PGSC0003DMG401008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 2.2e-08 63.9 94 63.8
Cfa025999 Carpinus fangiana HOM05D005916 ORTHO05D007168 4.1e-07 59.7 83 43.4
Dinv07271 Davidia involucrata HOM05D005916 ORTHO05D007168 3.5e-06 56.6 28 82.1


User provided reference genes

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