Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 1.3e-91 339.7 178 100.0
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 1.2e-52 210.3 148 75.0
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 9.6e-50 200.7 150 70.7
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.8e-48 196.4 150 68.7
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 3.1e-48 195.7 148 68.2
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 2.7e-44 182.6 169 62.7
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 1.3e-43 180.3 148 64.9
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 4.0e-40 168.7 166 54.2
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.5e-39 166.8 150 62.7
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 3.4e-39 165.6 166 59.0
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 3.4e-39 165.6 156 57.7
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 4.5e-39 165.2 158 58.2
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 4.5e-39 165.2 166 54.2
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 1.0e-38 164.1 148 61.5
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.3e-38 163.7 150 58.7
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 2.9e-38 162.5 166 52.4
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 6.5e-38 161.4 148 57.4
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.4e-37 160.2 147 59.2
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 4.2e-37 158.7 148 58.8
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 4.2e-37 158.7 150 57.3
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 9.3e-37 157.5 144 57.6
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.1e-36 156.4 144 56.9
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 2.1e-36 156.4 148 60.1
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.5e-36 155.6 144 56.9
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 4.6e-36 155.2 144 57.6
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 1.8e-35 153.3 144 56.2
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.3e-35 152.9 126 65.1
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 5.1e-35 151.8 126 66.7
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 5.1e-35 151.8 149 56.4
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.9e-34 149.8 157 56.7
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 4.3e-34 148.7 147 55.1
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.3e-33 147.1 156 51.9
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 2.8e-33 146.0 148 54.7
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 6.3e-33 144.8 166 49.4
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 8.2e-33 144.4 166 50.6
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 1.1e-32 144.1 146 54.1
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.8e-32 143.3 166 50.0
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 1.8e-32 143.3 148 54.1
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 2.4e-32 142.9 166 48.2
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 9.0e-32 141.0 166 47.6
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 2.6e-31 139.4 166 47.0
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 3.4e-31 139.0 150 52.0
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 3.4e-31 139.0 168 48.2
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 3.4e-31 139.0 149 49.0
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 4.5e-31 138.7 145 50.3
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 4.5e-31 138.7 150 52.0
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 2.9e-30 136.0 146 52.1
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 5.0e-30 135.2 140 50.0
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 6.5e-30 134.8 155 47.1
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 8.5e-30 134.4 142 52.8
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.1e-29 134.0 166 47.6
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.1e-29 134.0 166 47.6
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.1e-29 134.0 142 50.0
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 2.5e-29 132.9 155 47.1
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 3.2e-29 132.5 150 50.0
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 9.3e-29 131.0 140 48.6
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.7e-28 129.4 155 46.5
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 4.6e-28 128.6 144 54.2
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 7.9e-28 127.9 125 52.8
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 7.9e-28 127.9 139 48.9
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 3.9e-27 125.6 166 45.2
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 3.9e-27 125.6 166 45.2
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 3.9e-27 125.6 166 45.2
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 6.7e-27 124.8 145 48.3
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 1.1e-26 124.0 167 44.3
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 1.1e-26 124.0 167 44.3
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 1.5e-26 123.6 166 45.2
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 1.9e-26 123.2 144 52.8
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 1.9e-26 123.2 166 45.8
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 1.9e-26 123.2 136 49.3
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 2.5e-26 122.9 114 57.9
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 9.7e-26 120.9 166 45.2
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 9.7e-26 120.9 162 44.4
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.3e-25 120.6 166 45.8
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 1.7e-25 120.2 146 47.9
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 2.2e-25 119.8 166 42.8
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 2.8e-25 119.4 113 60.2
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 3.7e-25 119.0 161 46.0
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 4.8e-25 118.6 151 47.7
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 6.3e-25 118.2 114 57.0
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 6.3e-25 118.2 167 43.1
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 6.3e-25 118.2 161 45.3
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 8.2e-25 117.9 116 53.4
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.1e-24 117.5 128 48.4
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 1.1e-24 117.5 159 43.4
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.4e-24 117.1 113 59.3
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 1.4e-24 117.1 113 59.3
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 1.8e-24 116.7 174 40.2
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 3.1e-24 115.9 114 55.3
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 3.1e-24 115.9 129 49.6
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 3.4e-23 112.5 124 51.6
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 7.7e-23 111.3 159 44.0
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 1.3e-22 110.5 124 48.4
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 2.2e-22 109.8 123 49.6
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 8.5e-22 107.8 151 47.7
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 1.1e-21 107.5 195 37.9
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 1.4e-21 107.1 115 53.0
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 4.7e-20 102.1 146 43.8
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 8.8e-19 97.8 90 55.6
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 2.2e-17 93.2 97 48.5
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 8.2e-17 91.3 118 44.1
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 1.6e-12 77.0 115 35.7
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 2.7e-12 76.3 78 52.6
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 3.6e-12 75.9 136 29.4
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 4.7e-12 75.5 156 34.0
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 3.0e-11 72.8 69 52.2
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 8.8e-11 71.2 101 36.6
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 3.3e-10 69.3 91 39.6
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 9.7e-10 67.8 92 37.0
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 2.2e-09 66.6 123 35.8
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 3.7e-09 65.9 48 68.8
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 4.8e-09 65.5 120 35.8
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 5.3e-08 62.0 166 30.7
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 7.0e-08 61.6 94 39.4
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 1.2e-07 60.8 166 28.9


User provided reference genes

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