Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.1e-133 479.9 246 100.0
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 4.8e-116 421.4 246 87.4
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 6.9e-99 364.4 252 74.6
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.5e-98 361.7 252 74.2
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.5e-96 355.9 252 73.4
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 4.7e-95 351.7 255 71.0
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.2e-87 327.0 252 69.8
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 4.7e-87 325.1 259 66.0
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 6.5e-81 304.7 240 65.4
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 7.2e-80 301.2 248 63.7
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 4.7e-79 298.5 205 71.2
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 1.0e-78 297.4 248 60.1
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 1.4e-78 297.0 248 59.7
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.8e-78 296.6 248 62.9
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 3.0e-78 295.8 256 59.4
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 3.0e-78 295.8 251 61.0
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 6.8e-78 294.7 257 60.7
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 6.8e-78 294.7 250 60.0
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 1.2e-77 293.9 257 60.3
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 2.0e-77 293.1 247 61.5
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.6e-77 292.7 246 61.4
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 3.4e-77 292.4 250 59.2
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 4.4e-77 292.0 253 61.3
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 4.4e-77 292.0 248 63.3
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 4.4e-77 292.0 250 60.0
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 5.7e-77 291.6 248 58.9
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 7.5e-77 291.2 246 61.4
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 9.8e-77 290.8 209 67.5
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 9.8e-77 290.8 248 60.5
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 2.4e-75 286.2 256 59.4
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.1e-75 285.4 246 61.0
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 4.1e-75 285.4 246 61.8
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 2.7e-74 282.7 256 58.2
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 2.7e-74 282.7 254 58.3
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 2.7e-74 282.7 233 62.7
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 3.5e-74 282.3 186 74.7
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.5e-74 282.0 246 61.0
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 5.9e-74 281.6 246 60.6
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 2.2e-73 279.6 250 60.0
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 2.2e-73 279.6 245 60.8
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 5.0e-73 278.5 248 60.5
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 5.0e-73 278.5 232 60.8
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 5.0e-73 278.5 244 59.0
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.5e-72 276.9 200 66.0
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.9e-72 276.6 225 61.8
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 2.5e-72 276.2 202 70.8
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 3.2e-72 275.8 252 59.9
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 7.2e-72 274.6 250 58.8
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 7.2e-72 274.6 225 61.8
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 9.4e-72 274.2 249 58.6
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 2.1e-71 273.1 243 57.6
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 2.1e-71 273.1 253 59.3
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 4.7e-71 271.9 198 68.7
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 1.4e-70 270.4 247 58.3
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 2.3e-70 269.6 172 78.5
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 2.3e-70 269.6 187 70.1
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 2.3e-70 269.6 254 55.5
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 3.0e-70 269.2 250 60.0
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 3.0e-70 269.2 250 58.0
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 4.0e-70 268.9 247 57.5
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 4.0e-70 268.9 251 59.8
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 5.2e-70 268.5 258 55.0
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 1.2e-69 267.3 248 57.3
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 1.5e-69 266.9 252 57.1
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 1.5e-69 266.9 255 56.9
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 2.6e-69 266.2 223 62.3
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 9.8e-69 264.2 223 61.4
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 1.7e-68 263.5 197 66.0
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 2.8e-68 262.7 254 55.5
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 3.7e-68 262.3 243 54.3
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 4.9e-68 261.9 243 55.6
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 1.1e-67 260.8 252 55.6
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 5.9e-66 255.0 236 57.6
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 1.7e-65 253.4 247 55.1
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 2.9e-65 252.7 192 63.0
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 7.3e-64 248.1 201 61.2
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.2e-61 240.7 246 53.3
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 5.7e-61 238.4 237 53.2
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 2.4e-59 233.0 143 78.3
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 4.6e-58 228.8 217 56.7
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 5.9e-58 228.4 236 51.7
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 1.0e-57 227.6 218 56.0
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 1.7e-57 226.9 146 74.7
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 6.6e-57 224.9 189 61.9
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 8.6e-57 224.6 245 51.0
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 1.5e-56 223.8 216 54.6
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 1.5e-56 223.8 230 53.5
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 1.9e-56 223.4 216 55.1
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 1.9e-56 223.4 216 55.1
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 5.6e-56 221.9 218 53.2
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 2.8e-55 219.5 216 54.2
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 2.8e-55 219.5 210 56.2
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 3.4e-53 212.6 216 52.3
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 8.3e-52 208.0 191 51.8
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 8.3e-52 208.0 209 50.2
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 2.0e-50 203.4 178 59.0
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 2.8e-47 193.0 180 48.9
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 8.1e-47 191.4 238 45.8
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.4e-46 190.7 183 51.4
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 3.7e-44 182.6 207 44.4
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.4e-43 180.6 250 45.2
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.9e-43 180.3 185 52.4
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 5.1e-41 172.2 185 46.5
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.6e-39 167.2 182 45.1
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 7.6e-37 158.3 216 43.1
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 1.7e-36 157.1 155 53.5
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 7.8e-34 148.3 144 57.6
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.4e-30 137.5 236 36.4
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 8.9e-30 134.8 173 47.4
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 2.6e-29 133.3 87 70.1
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 2.4e-27 126.7 222 35.1
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 2.4e-22 110.2 86 60.5
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 6.0e-18 95.5 159 39.0
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 2.1e-15 87.0 67 62.7
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 8.1e-15 85.1 203 32.0
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.1e-14 83.2 140 32.9
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 6.0e-10 68.9 72 47.2
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 1.9e-08 63.9 90 42.2
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 4.3e-08 62.8 124 34.7
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 2.4e-06 57.0 44 63.6


User provided reference genes

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