Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09851 Vaccinium macrocarpon HOM05D000045 ORTHO05D000067 3.3e-170 601.7 313 100.0
Rhsim09G0196900 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.8e-99 364.4 250 81.2
Actinidia03110 Actinidia chinensis HOM05D000045 ORTHO05D000067 5.8e-82 308.5 253 70.0
Dinv28471 Davidia involucrata HOM05D000045 ORTHO05D000067 2.0e-66 256.9 250 59.6
CiPaw.03G103400 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.6e-55 220.7 242 53.7
Cpa.g.sc107.20 Carica papaya HOM05D000045 ORTHO05D000067 3.0e-46 189.9 251 46.6
Prupe.2G291000 Prunus persica HOM05D000045 ORTHO05D000067 1.9e-45 187.2 232 50.4
Cfa008288 Carpinus fangiana HOM05D000045 ORTHO05D000067 1.5e-42 177.6 239 49.0
Haze_13743 Corylus avellana HOM05D000045 ORTHO05D000067 9.9e-42 174.9 215 52.6
Glyma.20G156133 Glycine max HOM05D000045 ORTHO05D000067 1.1e-40 171.4 242 45.9
Duzib205G0811 Durio zibethinus HOM05D000045 ORTHO05D000067 3.2e-40 169.9 246 46.3
Potri.012G137500 Populus trichocarpa HOM05D000045 ORTHO05D000067 7.9e-39 165.2 240 45.0
Ciclev10018794m.g Citrus clementina HOM05D000045 ORTHO05D000067 2.3e-38 163.7 253 43.9
Phvul.007G067000 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 2.3e-38 163.7 254 42.9
Thecc.03G171700 Theobroma cacao HOM05D000045 ORTHO05D000067 1.1e-37 161.4 234 44.9
Atru.chr5.514 Acer truncatum HOM05D000045 ORTHO05D000067 2.0e-34 150.6 252 41.7
MSTRG.8443 Avicennia marina HOM05D000045 ORTHO05D000067 7.6e-34 148.7 242 40.9
Manes.06G144900 Manihot esculenta HOM05D000045 ORTHO05D000067 2.2e-33 147.1 248 40.3
Sabra12G0103000 Salix brachista HOM05D000045 ORTHO05D000067 3.8e-33 146.4 242 42.6
MD01G1197600 Malus domestica HOM05D000045 ORTHO05D000067 2.5e-32 143.7 254 41.3
Glyma.10G238500 Glycine max HOM05D000045 ORTHO05D000067 7.1e-32 142.1 204 46.6
Gohir.A09G040300 Gossypium hirsutum HOM05D000045 ORTHO05D000067 1.2e-31 141.4 241 40.7
RcHm_v2.0_Chr1g0376821 Rosa chinensis HOM05D000045 ORTHO05D000067 2.1e-31 140.6 251 40.6
Psat6g199280 Pisum sativum HOM05D000045 ORTHO05D000067 1.5e-29 134.4 255 38.4
COL.COLO4_14274 Corchorus olitorius HOM05D000045 ORTHO05D000835 1.9e-29 134.0 245 40.8
Migut.F01137 Erythranthe guttata HOM05D000045 ORTHO05D000067 3.3e-29 133.3 287 35.2
LjContig00238g0008568 Lotus japonicus HOM05D000045 ORTHO05D000067 7.4e-29 132.1 260 38.1
TPR.G17425 Trifolium pratense HOM05D000045 ORTHO05D000067 4.8e-28 129.4 232 40.5
Gorai.006G047000 Gossypium raimondii HOM05D000045 ORTHO05D000067 5.3e-27 125.9 233 37.8
FvH4_7g29093 Fragaria vesca HOM05D000045 ORTHO05D000067 9.0e-27 125.2 229 39.7
Lj1P993T57 Lonicera japonica HOM05D000045 ORTHO05D000067 1.1e-24 118.2 148 49.3
GSVIVG01032951001 Vitis vinifera HOM05D000045 ORTHO05D000611 1.8e-22 110.9 261 34.5
Dinv08765 Davidia involucrata HOM05D000045 ORTHO05D000611 3.3e-21 106.7 290 33.1
Dinv04075 Davidia involucrata HOM05D000045 ORTHO05D000611 7.2e-16 89.0 129 44.2
MSTRG.99 Avicennia marina HOM05D000045 ORTHO05D000067 1.2e-10 71.6 140 38.6
Potri.015G139300 Populus trichocarpa HOM05D000045 ORTHO05D000067 6.5e-09 65.9 80 47.5
Gohir.D09G040975 Gossypium hirsutum HOM05D000045 ORTHO05D000067 1.1e-08 65.1 91 46.2
MSTRG.100 Avicennia marina HOM05D000045 ORTHO05D000611 1.2e-07 61.6 66 43.9


User provided reference genes

Program Settings