Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 0.0e+00 1325.8 744 100.0
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 2.3e-177 626.7 779 54.3
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.8e-129 467.6 737 46.9
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 3.0e-129 466.8 737 46.9
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 8.5e-124 448.7 743 45.8
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 3.9e-113 413.3 797 41.0
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 6.3e-111 406.0 702 43.6
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.2e-100 370.9 772 39.0
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 2.2e-100 370.9 783 38.1
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.2e-95 354.4 382 58.9
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 7.2e-91 339.3 776 37.5
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 3.5e-85 320.5 790 35.9
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 5.0e-84 316.6 762 38.7
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 6.6e-84 316.2 774 37.3
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 8.6e-84 315.8 763 36.8
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 3.6e-82 310.5 775 37.0
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.6e-82 310.5 772 36.0
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 3.0e-81 307.4 795 36.6
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 4.0e-81 307.0 790 36.6
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 6.8e-81 306.2 721 37.0
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 7.5e-80 302.8 787 36.1
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 9.8e-80 302.4 793 35.3
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 4.9e-79 300.1 727 37.8
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.4e-79 299.7 771 36.3
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 9.2e-78 295.8 799 35.3
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 2.0e-77 294.7 806 34.9
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.7e-77 294.3 764 38.4
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 3.0e-76 290.8 784 36.1
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 3.3e-75 287.3 726 36.2
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 5.6e-75 286.6 748 39.4
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 1.6e-74 285.0 806 33.4
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 3.6e-74 283.9 672 37.1
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 1.0e-73 282.3 772 35.9
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 3.1e-73 280.8 800 37.2
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 4.0e-73 280.4 779 33.6
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 1.5e-72 278.5 787 33.2
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 3.4e-72 277.3 787 34.9
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 4.4e-72 276.9 743 35.4
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 9.8e-72 275.8 789 33.5
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.3e-71 275.4 790 33.8
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 1.7e-71 275.0 786 35.0
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.7e-71 275.0 789 33.3
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 1.7e-71 275.0 745 34.8
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 3.7e-71 273.9 781 33.3
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 3.2e-70 270.8 768 34.1
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 2.7e-69 267.7 789 33.3
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 4.6e-69 266.9 754 34.4
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.7e-68 265.0 773 33.5
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.5e-67 261.9 731 34.7
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 4.3e-67 260.4 777 33.8
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 4.3e-67 260.4 777 33.8
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 7.3e-67 259.6 777 33.8
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 2.8e-66 257.7 800 32.4
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 4.7e-66 256.9 791 33.8
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.7e-66 256.9 788 33.1
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 1.1e-65 255.8 396 48.5
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.8e-65 255.0 788 33.0
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 4.0e-65 253.8 740 34.9
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.4e-64 250.8 766 33.4
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 2.4e-62 244.6 787 31.8
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 3.5e-61 240.7 783 37.8
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 1.5e-59 235.3 703 34.7
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 5.6e-59 233.4 773 31.4
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 5.6e-59 233.4 705 32.8
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 2.1e-58 231.5 741 32.0
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 3.6e-58 230.7 756 30.3
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 4.7e-58 230.3 758 32.3
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 6.2e-58 229.9 773 31.3
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 8.1e-58 229.6 762 31.9
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.4e-57 228.8 765 30.1
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 5.2e-57 226.9 772 32.9
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 6.8e-57 226.5 748 32.8
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 4.4e-56 223.8 741 32.5
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 5.8e-56 223.4 752 31.8
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 1.3e-55 222.2 768 31.2
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 1.7e-55 221.9 698 33.2
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.7e-55 221.9 749 31.9
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 6.4e-55 219.9 794 31.5
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 6.4e-55 219.9 758 31.5
TAR626G0479 Trochodendron aralioides HOM05D003079 ORTHO05D003461 8.4e-55 219.5 381 44.1
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 3.2e-54 217.6 386 44.6
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 2.1e-53 214.9 748 31.7
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 2.1e-53 214.9 667 36.4
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 2.1e-53 214.9 679 33.3
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 1.0e-52 212.6 729 32.1
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 3.9e-52 210.7 375 44.0
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 8.6e-52 209.5 776 32.0
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 1.5e-51 208.8 764 29.6
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 1.9e-51 208.4 716 31.1
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 2.8e-50 204.5 778 30.6
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 1.1e-49 202.6 759 32.1
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 1.1e-49 202.6 723 31.1
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 5.8e-48 196.8 759 31.9
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 1.7e-47 195.3 758 30.6
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.4e-46 191.4 598 31.9
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 3.2e-46 191.0 658 31.3
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 1.2e-45 189.1 332 45.5
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 4.6e-45 187.2 603 31.8
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 4.3e-43 180.6 373 41.6
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 2.4e-41 174.9 376 39.4
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 1.2e-40 172.6 775 29.3
Lsat_1_v5_gn_7_115521 Lactuca sativa HOM05D003079 ORTHO05D003461 7.6e-40 169.9 334 42.8
HanXRQChr11g0335521 Helianthus annuus HOM05D003079 ORTHO05D003461 1.0e-36 159.5 718 28.3
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.3e-36 159.1 749 29.1
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 4.0e-33 147.5 740 28.8
Hund22967 Selenicereus undatus HOM05D003079 ORTHO05D003461 6.9e-33 146.7 368 38.6
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.2e-31 141.7 252 40.1
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 1.1e-30 139.4 765 28.0
Solyc07g066170.4 Solanum lycopersicum HOM05D003079 ORTHO05D003461 1.1e-30 139.4 473 29.4
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 6.0e-29 133.7 716 27.2
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 3.0e-28 131.3 672 29.5
ECA236G4881 Erigeron canadensis HOM05D003079 ORTHO05D003461 1.9e-27 128.6 285 42.5
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 5.3e-25 120.6 700 27.1
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 1.5e-24 119.0 654 27.8
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 4.5e-24 117.5 751 25.4
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 5.8e-24 117.1 707 27.6
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 7.6e-24 116.7 390 34.4
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 4.9e-23 114.0 748 26.9
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 3.2e-22 111.3 747 27.0
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 5.5e-22 110.5 677 27.3
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 1.8e-20 105.5 259 39.4
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 2.5e-19 101.7 703 26.3
THA.LOC104815679 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 4.3e-19 100.9 342 34.8
ATR0751G003 Amborella trichopoda HOM05D003079 ORTHO05D003461 1.3e-18 99.4 399 32.6
Actinidia03677 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.8e-18 98.2 99 62.6
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 6.3e-18 97.1 754 24.8
HPP92_022810 Vanilla planifolia HOM05D003079 ORTHO05D003461 9.0e-17 93.2 323 35.9
Oeu006261.2 Olea europaea HOM05D003079 ORTHO05D003461 2.0e-16 92.0 141 39.0
Ca_06048_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 3.4e-16 91.3 122 54.9
CiPaw.12G142900 Carya illinoinensis HOM05D003079 ORTHO05D003461 7.6e-16 90.1 230 31.3
AUR62043120 Chenopodium quinoa HOM05D003079 ORTHO05D003461 1.0e-15 89.7 244 31.6
Ca_09552_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 1.7e-15 89.0 180 45.0
BcaNung02417 Brassica carinata HOM05D003079 ORTHO05D003461 8.5e-15 86.7 761 24.7
TAR626G1036 Trochodendron aralioides HOM05D003079 ORTHO05D003461 8.5e-15 86.7 252 32.1
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 4.2e-14 84.3 768 25.8
COL.COLO4_07790 Corchorus olitorius HOM05D003079 ORTHO05D003461 5.5e-14 84.0 157 35.0
Aqoxy7G02327 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 1.6e-13 82.4 288 28.8
Lalb_Chr18g0048661 Lupinus albus HOM05D003079 ORTHO05D003461 1.6e-13 82.4 145 41.4
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 2.1e-13 82.0 752 23.9
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 2.7e-13 81.6 751 23.8
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 4.6e-13 80.9 774 24.0
PGSC0003DMG400028881 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.0e-12 79.7 88 48.9
Ah.06g180930 Amaranthus hybridus HOM05D003079 ORTHO05D003461 1.3e-12 79.3 205 35.1
CDE02G1968 Ceratophyllum demersum HOM05D000308 ORTHO05D003461 1.3e-12 79.3 591 25.2
ATR0751G103 Amborella trichopoda HOM05D003079 ORTHO05D003461 1.8e-12 79.0 131 35.9
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 2.3e-12 78.6 369 32.0
Carub.0003s1274 Capsella rubella HOM05D003079 ORTHO05D003461 3.0e-12 78.2 326 32.2
Oeu052884.2 Olea europaea HOM05D003079 ORTHO05D003461 3.9e-12 77.8 137 37.2
Medtr8g070940 Medicago truncatula HOM05D003079 ORTHO05D003461 5.1e-12 77.4 240 28.8
Peaxi162Scf00006g00810 Petunia axillaris HOM05D003079 ORTHO05D003461 1.9e-11 75.5 443 25.1
AL3G25210 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 2.5e-11 75.1 331 32.9
AT3G13360 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 5.7e-11 73.9 248 36.7
C01p22370 Brassica napus HOM05D003079 ORTHO05D003461 1.6e-10 72.4 746 23.2
BcaB08g35981 Brassica carinata HOM05D003079 ORTHO05D003461 2.2e-10 72.0 177 49.7
Aa31LG8G580 Aethionema arabicum HOM05D003079 ORTHO05D003461 3.7e-10 71.2 365 29.9
EL10Ac4g08434 Beta vulgaris HOM05D003079 ORTHO05D003461 1.1e-09 69.7 245 29.0
CARHR269610 Cardamine hirsuta HOM05D003079 ORTHO05D003461 1.4e-09 69.3 229 29.7
Thhalv10020643m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 2.4e-09 68.6 289 34.9
A10p13440 Brassica napus HOM05D003079 ORTHO05D003461 4.1e-09 67.8 179 49.7
BraA10t43447Z Brassica rapa HOM05D003079 ORTHO05D003461 4.1e-09 67.8 179 49.7
BcaC04g20138 Brassica carinata HOM05D003079 ORTHO05D003461 6.9e-09 67.0 179 49.7
BolC9t57600H Brassica oleracea HOM05D003079 ORTHO05D003461 6.9e-09 67.0 179 49.7
BraA01t01726Z Brassica rapa HOM05D003079 ORTHO05D003461 1.5e-08 65.9 756 23.8
Oeu015272.1 Olea europaea HOM05D003079 ORTHO05D003461 1.5e-08 65.9 131 35.1
Psat4g111200 Pisum sativum HOM05D003079 ORTHO05D003461 2.0e-08 65.5 175 29.7
THA.LOC104810573 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 2.6e-08 65.1 239 31.4
C09p47450 Brassica napus HOM05D003079 ORTHO05D003461 4.5e-08 64.3 179 49.2
Haze_07774 Corylus avellana HOM05D003079 ORTHO05D003461 4.5e-08 64.3 66 54.5
Haze_20425 Corylus avellana HOM05D003079 ORTHO05D003461 5.9e-08 63.9 94 44.7
AUR62018863 Chenopodium quinoa HOM05D000686 ORTHO05D000512 1.3e-07 62.8 164 36.6
Sp3g11560 Schrenkiella parvula HOM05D003079 ORTHO05D003461 1.7e-07 62.4 362 30.9
Actinidia03676 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.2e-07 62.0 116 37.9
MSTRG.14525 Avicennia marina HOM05D003079 ORTHO05D003461 3.8e-07 61.2 217 27.6
ECA240G3294 Erigeron canadensis HOM05D003079 ORTHO05D003461 8.5e-07 60.1 215 28.4
Lsat_1_v5_gn_9_88621 Lactuca sativa HOM05D003079 ORTHO05D003461 8.5e-07 60.1 329 30.4
Os09g0481300 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 1.9e-06 58.9 226 25.2
Lalb_Chr18g0048681 Lupinus albus HOM05D003079 ORTHO05D003461 5.5e-06 57.4 155 37.4
SGA_v2.0_scaffold186G40233 Striga asiatica HOM05D003079 ORTHO05D003461 5.5e-06 57.4 377 28.9


User provided reference genes

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