Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09747 Vaccinium macrocarpon HOM05D001540 ORTHO05D034279 1.1e-69 266.5 135 100.0
RhsimUnG0253300 Rhododendron simsii HOM05D001540 ORTHO05D001520 1.9e-18 96.3 60 91.7
CiPaw.11G183400 Carya illinoinensis HOM05D001540 ORTHO05D001520 2.6e-15 85.9 66 74.2
Haze_09606 Corylus avellana HOM05D001540 ORTHO05D001520 9.9e-15 84.0 66 74.2
Hma1.2p1_0538F.1_g174370 Hydrangea macrophylla HOM05D001540 ORTHO05D001520 1.3e-14 83.6 68 76.5
CiPaw.12G126300 Carya illinoinensis HOM05D001540 ORTHO05D001520 1.7e-14 83.2 66 72.7
Glyma.13G287000 Glycine max HOM05D001540 ORTHO05D001520 1.7e-14 83.2 67 73.1
QL08p013394 Quercus lobata HOM05D001540 ORTHO05D001520 2.2e-14 82.8 66 71.2
QL08p013554 Quercus lobata HOM05D001540 ORTHO05D001520 2.2e-14 82.8 66 71.2
Prupe.4G201900 Prunus persica HOM05D001540 ORTHO05D001520 1.9e-13 79.7 66 72.7
Glyma.12G214600 Glycine max HOM05D001540 ORTHO05D001520 2.4e-13 79.3 72 68.1
Actinidia35314 Actinidia chinensis HOM05D001540 ORTHO05D001520 3.2e-13 79.0 68 75.0
MD11G1227300 Malus domestica HOM05D001540 ORTHO05D001520 3.2e-13 79.0 67 71.6
Medtr2g082770 Medicago truncatula HOM05D001540 ORTHO05D001520 3.2e-13 79.0 73 65.8
Ca_01755_v3 Cicer arietinum L. HOM05D001540 ORTHO05D001520 4.2e-13 78.6 72 65.3
Ca_01760_v3 Cicer arietinum L. HOM05D001540 ORTHO05D001520 4.2e-13 78.6 72 65.3
CSS0010177 Camellia sinensis var. sinensis HOM05D001540 ORTHO05D001520 7.1e-13 77.8 69 73.9
CSS0026650 Camellia sinensis var. sinensis HOM05D001540 ORTHO05D001520 7.1e-13 77.8 69 73.9
Lalb_Chr14g0366091 Lupinus albus HOM05D001540 ORTHO05D001520 7.1e-13 77.8 65 67.7
arahy.Tifrunner.gnm1.ann1.C2FWCT Arachis hypogaea HOM05D001540 ORTHO05D001520 9.3e-13 77.4 73 64.4
arahy.Tifrunner.gnm1.ann1.U6HGF1 Arachis hypogaea HOM05D001540 ORTHO05D001520 9.3e-13 77.4 73 64.4
Lj3g0015626 Lotus japonicus HOM05D001540 ORTHO05D001520 9.3e-13 77.4 70 65.7
GSVIVG01014602001 Vitis vinifera HOM05D001540 ORTHO05D001520 1.2e-12 77.0 58 72.4
FvH4_3g21770 Fragaria vesca HOM05D001540 ORTHO05D001520 2.1e-12 76.3 59 72.9
FAN11G3615 Fragaria x ananassa HOM05D001540 ORTHO05D001520 2.1e-12 76.3 59 72.9
FAN25G3568 Fragaria x ananassa HOM05D001540 ORTHO05D001520 2.1e-12 76.3 59 72.9
FAN16G2991 Fragaria x ananassa HOM05D001540 ORTHO05D001520 2.7e-12 75.9 59 71.2
PGR031G2196 Punica granatum HOM05D001540 ORTHO05D001520 3.5e-12 75.5 59 71.2
FAN21G1514 Fragaria x ananassa HOM05D001540 ORTHO05D034279 6.0e-12 74.7 59 71.2
FAN21G1944 Fragaria x ananassa HOM05D001540 ORTHO05D001520 6.0e-12 74.7 59 71.2
TPR.G36798 Trifolium pratense HOM05D001540 ORTHO05D001520 7.9e-12 74.3 75 61.3
Hund02138 Selenicereus undatus HOM05D001540 ORTHO05D001520 1.0e-11 73.9 79 59.5
Dinv03937 Davidia involucrata HOM05D001540 ORTHO05D001520 1.8e-11 73.2 68 72.1
Lalb_Chr22g0357051 Lupinus albus HOM05D001540 ORTHO05D001520 1.8e-11 73.2 66 66.7
RcHm_v2.0_Chr5g0037241 Rosa chinensis HOM05D001540 ORTHO05D001520 3.0e-11 72.4 59 69.5
Nn1g03665 Nelumbo nucifera HOM05D001540 ORTHO05D001520 3.9e-11 72.0 69 68.1
Eucgr.F03423 Eucalyptus grandis HOM05D001540 ORTHO05D001520 5.1e-11 71.6 66 66.7
Phvul.005G091300 Phaseolus vulgaris HOM05D001540 ORTHO05D001520 5.1e-11 71.6 68 67.6
Cc05_g13210 Coffea canephora HOM05D001540 ORTHO05D001520 1.1e-10 70.5 70 68.6
VMungo1080G1382 Vigna mungo HOM05D001540 ORTHO05D001520 1.5e-10 70.1 61 70.5
CANSAT11G2547 Cannabis sativa HOM05D001540 ORTHO05D001520 1.9e-10 69.7 62 69.4
Sc03g0009120 Simmondsia chinensis HOM05D001540 ORTHO05D001520 1.9e-10 69.7 63 66.7
Potri.001G417000 Populus trichocarpa HOM05D001540 ORTHO05D001520 3.3e-10 68.9 66 62.1
Sabra16G0283400 Salix brachista HOM05D001540 ORTHO05D001520 4.3e-10 68.6 66 62.1
SalBow7G2055 Salvia bowleyana HOM05D001540 ORTHO05D001520 5.6e-10 68.2 71 63.4
Manes.15G076800 Manihot esculenta HOM05D001540 ORTHO05D001520 7.4e-10 67.8 60 65.0
HanXRQChr08g0233951 Helianthus annuus HOM05D001540 ORTHO05D001520 1.3e-09 67.0 66 66.7
Potri.011G132700 Populus trichocarpa HOM05D001540 ORTHO05D001520 2.8e-09 65.9 47 74.5
Ah.06g183070 Amaranthus hybridus HOM05D001540 ORTHO05D001520 3.7e-09 65.5 69 62.3
Sabra11G0119500 Salix brachista HOM05D001540 ORTHO05D001520 3.7e-09 65.5 47 74.5
TAR624G0744 Trochodendron aralioides HOM05D001540 ORTHO05D001520 3.7e-09 65.5 69 66.7
Atru.chr2.3205 Acer truncatum HOM05D001540 ORTHO05D001520 4.8e-09 65.1 62 64.5
MSTRG.12955 Avicennia marina HOM05D001540 ORTHO05D001520 6.2e-09 64.7 73 61.6
HanXRQChr05g0159231 Helianthus annuus HOM05D001540 ORTHO05D001520 8.2e-09 64.3 62 62.9
Sed0016223 Sechium edule HOM05D001540 ORTHO05D001520 8.2e-09 64.3 55 61.8
EL10Ac4g07983 Beta vulgaris HOM05D001540 ORTHO05D001520 1.4e-08 63.5 70 58.6
Migut.H01859 Erythranthe guttata HOM05D001540 ORTHO05D001520 1.4e-08 63.5 76 57.9
ECA246G1276 Erigeron canadensis HOM05D001540 ORTHO05D001520 2.4e-08 62.8 107 49.5
Manes.03G122700 Manihot esculenta HOM05D001540 ORTHO05D001520 2.4e-08 62.8 47 70.2
AUR62015639 Chenopodium quinoa HOM05D001540 ORTHO05D001520 3.1e-08 62.4 70 58.6
Nn1g06996 Nelumbo nucifera HOM05D001540 ORTHO05D001520 5.3e-08 61.6 62 66.1
Sed0020701 Sechium edule HOM05D001540 ORTHO05D001520 5.3e-08 61.6 65 55.4
MBI02_g18407_MAGBIO Magnolia biondii HOM05D001540 ORTHO05D001520 6.9e-08 61.2 72 56.9
Oeu042914.1 Olea europaea HOM05D001540 ORTHO05D001520 9.0e-08 60.8 74 59.5
CsaV3_3G022880 Cucumis sativus L. HOM05D001540 ORTHO05D001520 1.5e-07 60.1 66 56.1
CsaV3_UNG229020 Cucumis sativus L. HOM05D001540 ORTHO05D001520 1.5e-07 60.1 66 56.1
Gohir.A01G074300 Gossypium hirsutum HOM05D001540 ORTHO05D001520 2.0e-07 59.7 66 57.6
AUR62029232 Chenopodium quinoa HOM05D001540 ORTHO05D001520 2.6e-07 59.3 70 55.7
MELO3C018126.2 Cucumis melo HOM05D001540 ORTHO05D001520 2.6e-07 59.3 61 59.0
COL.COLO4_09563 Corchorus olitorius HOM05D001540 ORTHO05D001520 4.5e-07 58.5 66 56.1
Gohir.D01G060800 Gossypium hirsutum HOM05D001540 ORTHO05D001520 4.5e-07 58.5 66 57.6
Gorai.002G082200 Gossypium raimondii HOM05D001540 ORTHO05D001520 4.5e-07 58.5 66 57.6
Cpa.g.sc97.73 Carica papaya HOM05D001540 ORTHO05D001520 5.8e-07 58.2 64 54.7
TWI38G1832 Tripterygium wilfordii HOM05D001540 ORTHO05D001520 5.8e-07 58.2 70 60.0
Lsat_1_v5_gn_5_5681 Lactuca sativa HOM05D001540 ORTHO05D001520 7.6e-07 57.8 75 53.3
Thecc.07G054500 Theobroma cacao HOM05D001540 ORTHO05D001520 1.0e-06 57.4 66 57.6
Nitab4.5_0000749g0010 Nicotiana tabacum HOM05D001540 ORTHO05D001520 1.7e-06 56.6 48 70.8
Oeu013855.1 Olea europaea HOM05D001540 ORTHO05D001520 1.7e-06 56.6 69 56.5
DCAR_022522 Daucus carota HOM05D001540 ORTHO05D001520 2.2e-06 56.2 61 55.7
Nitab4.5_0000092g0040 Nicotiana tabacum HOM05D001540 ORTHO05D001520 2.9e-06 55.8 61 60.7
ClCG05G014790 Citrullus lanatus HOM05D001540 ORTHO05D001520 3.8e-06 55.5 61 52.5
Thhalv10012811m.g Eutrema salsugineum HOM05D001540 ORTHO05D001520 4.9e-06 55.1 61 55.7
Lalb_Chr19g0134731 Lupinus albus HOM05D001540 ORTHO05D001520 4.9e-06 55.1 75 52.0
Gohir.A11G280400 Gossypium hirsutum HOM05D001540 ORTHO05D001520 6.5e-06 54.7 66 53.0
Gohir.D11G290700 Gossypium hirsutum HOM05D001540 ORTHO05D001520 6.5e-06 54.7 66 53.0
Gorai.007G314600 Gossypium raimondii HOM05D001540 ORTHO05D001520 6.5e-06 54.7 66 53.0
PSO541G0622 Papaver somniferum HOM05D001540 ORTHO05D001520 6.5e-06 54.7 61 57.4
CDE02G0084 Ceratophyllum demersum HOM05D001540 ORTHO05D001520 8.4e-06 54.3 64 57.8
CDE05G1975 Ceratophyllum demersum HOM05D001540 ORTHO05D034279 8.4e-06 54.3 64 56.2


User provided reference genes

Program Settings