Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 7.5e-106 387.1 185 100.0
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 2.9e-73 278.9 211 69.7
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 9.6e-61 237.3 185 64.9
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.6e-60 236.5 181 66.9
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 4.8e-60 235.0 185 62.7
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 4.8e-60 235.0 185 62.7
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 6.2e-60 234.6 180 63.9
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 1.4e-59 233.4 178 65.2
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 4.0e-59 231.9 185 62.2
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 1.2e-58 230.3 182 62.6
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 1.2e-58 230.3 182 63.2
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 1.2e-58 230.3 185 63.8
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 1.2e-58 230.3 185 62.2
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 1.5e-58 229.9 184 60.9
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 2.6e-58 229.2 183 61.2
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.6e-58 229.2 181 60.2
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 3.4e-58 228.8 171 64.9
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.5e-58 228.4 183 61.2
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 4.5e-58 228.4 185 61.1
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 5.8e-58 228.0 185 62.2
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 5.8e-58 228.0 185 63.2
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 5.8e-58 228.0 167 65.9
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 7.6e-58 227.6 181 63.5
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 7.6e-58 227.6 188 64.4
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 1.0e-57 227.3 171 65.5
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 1.3e-57 226.9 185 62.2
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 1.3e-57 226.9 185 62.2
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 1.3e-57 226.9 185 62.7
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.7e-57 226.5 165 67.9
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.7e-57 226.5 185 60.5
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 2.2e-57 226.1 185 62.7
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 2.9e-57 225.7 162 68.5
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 2.9e-57 225.7 180 62.2
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.9e-57 225.7 180 62.2
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 2.9e-57 225.7 183 61.2
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 3.8e-57 225.3 176 64.2
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 6.5e-57 224.6 179 62.0
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 8.4e-57 224.2 184 59.8
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 1.4e-56 223.4 165 65.5
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.9e-56 223.0 187 61.5
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.9e-56 223.0 185 61.6
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 3.2e-56 222.2 185 61.6
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 3.2e-56 222.2 163 65.0
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 7.1e-56 221.1 182 61.0
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 7.1e-56 221.1 183 62.3
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 7.1e-56 221.1 176 61.9
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 9.3e-56 220.7 187 61.5
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 1.2e-55 220.3 185 60.5
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 1.2e-55 220.3 166 63.9
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.2e-55 220.3 185 59.5
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 2.1e-55 219.5 167 64.1
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.7e-55 219.2 174 62.1
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 3.5e-55 218.8 185 58.9
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 4.6e-55 218.4 174 62.1
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 6.0e-55 218.0 173 61.8
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.0e-54 217.2 180 60.6
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 1.0e-54 217.2 174 60.3
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 1.0e-54 217.2 179 59.8
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 1.3e-54 216.9 177 62.1
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 1.8e-54 216.5 180 59.4
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 1.8e-54 216.5 183 58.5
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 1.8e-54 216.5 174 60.9
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 2.3e-54 216.1 178 61.8
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 2.3e-54 216.1 173 62.4
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 3.0e-54 215.7 166 62.7
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 3.9e-54 215.3 166 62.0
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.1e-54 214.9 184 59.2
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 5.1e-54 214.9 167 61.7
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 6.7e-54 214.5 177 61.6
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 8.7e-54 214.2 176 60.2
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 8.7e-54 214.2 174 59.8
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 8.7e-54 214.2 182 58.2
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 1.5e-53 213.4 183 57.4
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 1.5e-53 213.4 157 66.2
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 2.5e-53 212.6 178 59.0
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 3.3e-53 212.2 185 57.3
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 5.7e-53 211.5 171 60.2
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 7.4e-53 211.1 177 59.3
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 9.6e-53 210.7 183 57.4
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 9.6e-53 210.7 183 57.4
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 2.1e-52 209.5 183 56.8
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 2.8e-52 209.1 183 57.4
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 4.8e-52 208.4 183 56.3
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 6.3e-52 208.0 178 58.4
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 1.1e-51 207.2 186 59.1
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 1.4e-51 206.8 180 57.2
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 2.4e-51 206.1 176 58.0
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 3.1e-51 205.7 184 58.2
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 4.1e-51 205.3 183 55.2
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 4.1e-51 205.3 183 55.7
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 4.1e-51 205.3 183 55.7
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.2e-50 203.8 178 58.4
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.2e-50 203.8 178 58.4
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 2.0e-50 203.0 183 55.2
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 2.0e-50 203.0 173 58.4
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 2.0e-50 203.0 173 60.1
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 3.4e-50 202.2 180 56.1
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 3.4e-50 202.2 171 57.3
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 2.2e-49 199.5 165 57.6
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 5.0e-49 198.4 169 58.6
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 5.0e-49 198.4 184 54.9
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 1.4e-48 196.8 171 59.1
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.4e-48 196.8 172 55.8
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.2e-47 193.7 172 56.4
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 1.2e-47 193.7 174 58.0
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.3e-46 190.3 159 63.5
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 3.3e-45 185.7 174 53.4
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 1.8e-43 179.9 153 58.8
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 2.6e-42 176.0 95 84.2
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 5.9e-42 174.9 171 50.3
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 7.7e-42 174.5 93 83.9
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 3.8e-41 172.2 94 80.9
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 5.0e-41 171.8 100 77.0
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 2.3e-38 162.9 133 60.2
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 5.7e-37 158.3 96 76.0
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.3e-35 151.8 95 71.6
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 3.7e-28 129.0 128 53.1
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 2.0e-21 106.7 135 48.9
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 8.0e-15 84.7 42 83.3
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 3.1e-11 72.8 63 52.4
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 1.6e-10 70.5 45 68.9
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 2.0e-10 70.1 56 62.5
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 7.7e-10 68.2 35 91.4
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 1.0e-06 57.8 56 57.1
A06p35450 Brassica napus HOM05D006458 ORTHO05D041657 5.2e-06 55.5 35 71.4
BraA06t26468Z Brassica rapa HOM05D006458 ORTHO05D041657 5.2e-06 55.5 35 71.4
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.2e-06 55.5 61 50.8


User provided reference genes

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