Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09727 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 3.1e-133 478.4 233 100.0
vmacro17287 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 4.0e-128 461.5 233 95.3
vmacro13225 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 2.7e-124 448.7 233 94.0
Rhsim07G0009900 Rhododendron simsii HOM05D004213 ORTHO05D005091 2.3e-120 435.6 233 90.1
Dinv43865 Davidia involucrata HOM05D004213 ORTHO05D005091 6.3e-110 401.0 233 82.8
Hma1.2p1_0623F.1_g191100 Hydrangea macrophylla HOM05D004213 ORTHO05D005091 7.0e-109 397.5 233 81.5
GSVIVG01026970001 Vitis vinifera HOM05D004213 ORTHO05D005091 1.2e-108 396.7 233 80.3
Actinidia20165 Actinidia chinensis HOM05D004213 ORTHO05D005091 2.0e-108 396.0 255 76.9
TAR374G1598 Trochodendron aralioides HOM05D004213 ORTHO05D005091 4.5e-108 394.8 233 82.0
Atru.chr7.1501 Acer truncatum HOM05D004213 ORTHO05D005091 2.5e-106 389.0 233 80.7
Ciclev10021940m.g Citrus clementina HOM05D004213 ORTHO05D005091 1.2e-105 386.7 233 78.1
Hma1.2p1_1013F.1_g247750 Hydrangea macrophylla HOM05D004213 ORTHO05D005091 3.6e-105 385.2 235 79.1
TWI09G0095 Tripterygium wilfordii HOM05D004213 ORTHO05D005091 4.7e-105 384.8 233 80.3
arahy.Tifrunner.gnm1.ann1.HWB48S Arachis hypogaea HOM05D004213 ORTHO05D005091 1.5e-103 379.8 227 79.7
arahy.Tifrunner.gnm1.ann1.LEY1JS Arachis hypogaea HOM05D004213 ORTHO05D005091 1.5e-103 379.8 227 79.7
Nitab4.5_0001141g0050 Nicotiana tabacum HOM05D004213 ORTHO05D005091 2.2e-102 375.9 233 79.0
VMungo0540G0091 Vigna mungo HOM05D004213 ORTHO05D005091 1.8e-101 372.9 227 78.4
Medtr8g028485 Medicago truncatula HOM05D004213 ORTHO05D005091 3.2e-101 372.1 227 79.3
PSO017G5376 Papaver somniferum HOM05D004213 ORTHO05D005091 4.1e-101 371.7 233 76.0
HanXRQChr06g0170371 Helianthus annuus HOM05D004213 ORTHO05D005091 5.4e-101 371.3 237 75.9
RcHm_v2.0_Chr1g0366261 Rosa chinensis HOM05D004213 ORTHO05D005091 7.0e-101 370.9 234 76.5
Thecc.01G352200 Theobroma cacao HOM05D004213 ORTHO05D005091 7.0e-101 370.9 233 77.7
Lalb_Chr10g0096631 Lupinus albus HOM05D004213 ORTHO05D005091 2.0e-100 369.4 226 76.5
RcHm_v2.0_Chr3g0492131 Rosa chinensis HOM05D004213 ORTHO05D005091 2.0e-100 369.4 234 76.1
TPR.G28293 Trifolium pratense HOM05D004213 ORTHO05D005091 2.0e-100 369.4 227 78.4
Lj3g0016777 Lotus japonicus HOM05D004213 ORTHO05D005091 2.7e-100 369.0 227 78.0
COL.COLO4_19238 Corchorus olitorius HOM05D004213 ORTHO05D005091 3.5e-100 368.6 249 73.9
CSS0029792 Camellia sinensis var. sinensis HOM05D004213 ORTHO05D005091 5.9e-100 367.9 235 77.4
CSS0049269 Camellia sinensis var. sinensis HOM05D004213 ORTHO05D005091 5.9e-100 367.9 235 77.4
Ca_09511_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 5.9e-100 367.9 227 77.5
Ca_30061_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 5.9e-100 367.9 227 77.5
FAN06G3506 Fragaria x ananassa HOM05D004213 ORTHO05D005091 7.8e-100 367.5 234 76.1
RcHm_v2.0_Chr3g0490801 Rosa chinensis HOM05D004213 ORTHO05D005091 1.0e-99 367.1 234 75.6
FvH4_7g21940 Fragaria vesca HOM05D004213 ORTHO05D005091 1.7e-99 366.3 234 75.6
Lalb_Chr17g0338991 Lupinus albus HOM05D004213 ORTHO05D005091 1.7e-99 366.3 227 77.5
Nitab4.5_0007641g0010 Nicotiana tabacum HOM05D004213 ORTHO05D005091 2.3e-99 365.9 233 76.8
PSO063G4449 Papaver somniferum HOM05D004213 ORTHO05D005091 2.3e-99 365.9 233 74.7
Potri.002G164800 Populus trichocarpa HOM05D004213 ORTHO05D005091 2.3e-99 365.9 234 76.1
CANSAT56G1246 Cannabis sativa HOM05D004213 ORTHO05D005091 3.0e-99 365.5 233 76.4
Medtr8g087440 Medicago truncatula HOM05D004213 ORTHO05D005091 3.0e-99 365.5 227 78.0
MBI16_g00685_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 3.9e-99 365.2 233 75.1
ClCG09G006700 Citrullus lanatus HOM05D004213 ORTHO05D005091 5.0e-99 364.8 233 76.4
Sed0018043 Sechium edule HOM05D004213 ORTHO05D005091 5.0e-99 364.8 233 75.5
Oeu004904.1 Olea europaea HOM05D004213 ORTHO05D005091 6.6e-99 364.4 233 75.1
Solyc09g075370.3 Solanum lycopersicum HOM05D004213 ORTHO05D005091 6.6e-99 364.4 233 77.7
Oeu010628.1 Olea europaea HOM05D004213 ORTHO05D005091 1.1e-98 363.6 239 74.5
PGR142G0776 Punica granatum HOM05D004213 ORTHO05D005091 1.1e-98 363.6 234 74.8
PGSC0003DMG400031793 Solanum tuberosum HOM05D004213 ORTHO05D005091 1.1e-98 363.6 233 77.3
Eucgr.C02275 Eucalyptus grandis HOM05D004213 ORTHO05D005091 1.5e-98 363.2 233 76.4
FAN01G2056 Fragaria x ananassa HOM05D004213 ORTHO05D005091 1.5e-98 363.2 233 75.5
Nitab4.5_0000116g0380 Nicotiana tabacum HOM05D004213 ORTHO05D005091 1.9e-98 362.8 233 76.8
Hund26583 Selenicereus undatus HOM05D004213 ORTHO05D005091 1.9e-98 362.8 232 75.4
THA.LOC104827605 Tarenaya hassleriana HOM05D004213 ORTHO05D005091 2.5e-98 362.5 234 74.4
Phvul.006G145900 Phaseolus vulgaris HOM05D004213 ORTHO05D005091 3.3e-98 362.1 227 75.8
Sopen09g030140 Solanum pennellii HOM05D004213 ORTHO05D005091 3.3e-98 362.1 233 76.8
MELO3C015876.2 Cucumis melo HOM05D004213 ORTHO05D005091 5.6e-98 361.3 233 75.1
Gorai.004G155200 Gossypium raimondii HOM05D004213 ORTHO05D005091 7.3e-98 360.9 227 78.0
Duzib138G1303 Durio zibethinus HOM05D004213 ORTHO05D005091 9.5e-98 360.5 233 76.8
Psat4g157720 Pisum sativum HOM05D004213 ORTHO05D005091 9.5e-98 360.5 224 77.7
Sabra02G0146700 Salix brachista HOM05D004213 ORTHO05D005091 1.2e-97 360.1 234 76.1
Gohir.D08G149400 Gossypium hirsutum HOM05D004213 ORTHO05D005091 1.6e-97 359.8 227 77.5
PGSC0003DMG400032548 Solanum tuberosum HOM05D004213 ORTHO05D005091 2.1e-97 359.4 233 76.8
ATR0751G024 Amborella trichopoda HOM05D004213 ORTHO05D005091 1.8e-96 356.3 234 75.2
Ca_03495_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 1.8e-96 356.3 227 75.3
Migut.B01801 Erythranthe guttata HOM05D004213 ORTHO05D005091 2.3e-96 355.9 236 72.9
Psat5g297040 Pisum sativum HOM05D004213 ORTHO05D005091 2.3e-96 355.9 218 77.1
Sopen04g004260 Solanum pennellii HOM05D004213 ORTHO05D005091 2.3e-96 355.9 233 76.4
CsaV3_7G028460 Cucumis sativus L. HOM05D004213 ORTHO05D005091 4.0e-96 355.1 233 72.5
Cfa003870 Carpinus fangiana HOM05D004213 ORTHO05D005091 1.2e-95 353.6 233 74.2
MD07G1193700 Malus domestica HOM05D004213 ORTHO05D005091 1.2e-95 353.6 236 75.8
MD07G1194000 Malus domestica HOM05D004213 ORTHO05D005091 1.2e-95 353.6 236 75.8
Haze_15567 Corylus avellana HOM05D004213 ORTHO05D005091 2.6e-95 352.4 233 74.7
FAN10G1826 Fragaria x ananassa HOM05D004213 ORTHO05D005091 2.6e-95 352.4 249 70.3
Glyma.16G031500 Glycine max HOM05D004213 ORTHO05D005091 2.6e-95 352.4 218 78.0
EL10Ac1g01391 Beta vulgaris HOM05D004213 ORTHO05D005091 4.4e-95 351.7 234 73.9
FAN03G2999 Fragaria x ananassa HOM05D004213 ORTHO05D005091 4.4e-95 351.7 249 69.5
Gohir.A04G053400 Gossypium hirsutum HOM05D004213 ORTHO05D005091 7.5e-95 350.9 227 75.3
CDE10G0889 Ceratophyllum demersum HOM05D004213 ORTHO05D005091 2.9e-94 349.0 234 72.2
TPR.G7188 Trifolium pratense HOM05D004213 ORTHO05D005091 1.1e-93 347.1 219 76.3
Ah.02g117780 Amaranthus hybridus HOM05D004213 ORTHO05D005091 1.4e-93 346.7 213 77.5
CiPaw.02G035500 Carya illinoinensis HOM05D004213 ORTHO05D005091 1.9e-93 346.3 235 72.3
BraA04t18889Z Brassica rapa HOM05D005821 ORTHO05D006649 1.6e-92 343.2 219 73.5
BcaB01g03237 Brassica carinata HOM05D004213 ORTHO05D005091 2.7e-92 342.4 218 72.5
Carub.0001s1438 Capsella rubella HOM05D004213 ORTHO05D005091 6.0e-92 341.3 235 70.2
DCAR_025215 Daucus carota HOM05D004213 ORTHO05D005091 1.0e-91 340.5 231 69.7
Glyma.15G111800 Glycine max HOM05D004213 ORTHO05D005091 1.3e-91 340.1 224 73.2
MD10G1064600 Malus domestica HOM05D004213 ORTHO05D005091 1.3e-91 340.1 236 72.9
Peaxi162Scf00037g01020 Petunia axillaris HOM05D004213 ORTHO05D005091 1.3e-91 340.1 233 73.4
AT1G14620 Arabidopsis thaliana HOM05D004213 ORTHO05D005091 2.3e-91 339.3 222 72.1
Lj9A589G62 Lonicera japonica HOM05D004213 ORTHO05D005091 2.3e-91 339.3 236 72.9
BcaC02g07022 Brassica carinata HOM05D004213 ORTHO05D005091 3.0e-91 339.0 219 71.7
Sp1g12980 Schrenkiella parvula HOM05D004213 ORTHO05D005091 3.0e-91 339.0 222 72.5
Thhalv10008660m.g Eutrema salsugineum HOM05D004213 ORTHO05D005091 3.9e-91 338.6 234 70.1
Sp4g28190 Schrenkiella parvula HOM05D004213 ORTHO05D005091 3.9e-91 338.6 222 71.6
BraA03t11766Z Brassica rapa HOM05D004213 ORTHO05D005091 5.0e-91 338.2 218 72.5
AL1G26590 Arabidopsis lyrata HOM05D004213 ORTHO05D005091 6.6e-91 337.8 235 69.4
C04p72100 Brassica napus HOM05D005821 ORTHO05D006649 8.6e-91 337.4 219 71.2
CARHR015120 Cardamine hirsuta HOM05D004213 ORTHO05D005091 1.5e-90 336.7 234 68.8
unitig_0.g337 Utricularia gibba HOM05D004213 ORTHO05D005091 1.9e-90 336.3 227 72.7
Aa31LG1G27530 Aethionema arabicum HOM05D004213 ORTHO05D005091 3.3e-90 335.5 234 69.2
A03p25480 Brassica napus HOM05D004213 ORTHO05D005091 3.3e-90 335.5 218 72.0
Cc02_g38590 Coffea canephora HOM05D004213 ORTHO05D005091 5.6e-90 334.7 242 69.0
Nn1g07606 Nelumbo nucifera HOM05D004213 ORTHO05D005091 5.6e-90 334.7 229 71.6
AUR62017900 Chenopodium quinoa HOM05D004213 ORTHO05D005091 9.5e-90 334.0 237 68.4
BcaC01g05093 Brassica carinata HOM05D004213 ORTHO05D005091 2.8e-89 332.4 218 71.1
C03p30410 Brassica napus HOM05D004213 ORTHO05D005091 2.8e-89 332.4 218 71.1
Glyma.09G007400 Glycine max HOM05D004213 ORTHO05D005091 3.6e-89 332.0 227 71.4
CiPaw.01G067700 Carya illinoinensis HOM05D004213 ORTHO05D005091 4.7e-89 331.6 233 71.2
BolC3t15389H Brassica oleracea HOM05D004213 ORTHO05D005091 8.1e-89 330.9 218 71.1
Os06g0300600 Oryza sativa ssp. japonica HOM05D004213 ORTHO05D005091 1.1e-88 330.5 233 69.5
Zm00001eb381110 Zea mays HOM05D004213 ORTHO05D005091 6.8e-88 327.8 230 68.3
SalBow3G3674 Salvia bowleyana HOM05D004213 ORTHO05D005091 1.5e-87 326.6 229 70.7
SGA_v2.0_scaffold4G02277 Striga asiatica HOM05D004213 ORTHO05D005091 7.5e-87 324.3 281 61.2
AUR62003587 Chenopodium quinoa HOM05D004213 ORTHO05D005091 1.3e-86 323.6 237 67.1
Manes.05G029000 Manihot esculenta HOM05D004213 ORTHO05D005091 8.3e-86 320.9 233 68.2
Gohir.A08G128100 Gossypium hirsutum HOM05D004213 ORTHO05D005091 1.1e-85 320.5 227 70.9
HPP92_022817 Vanilla planifolia HOM05D004213 ORTHO05D005091 1.1e-85 320.5 237 65.8
Dinv32523 Davidia involucrata HOM05D004213 ORTHO05D005091 1.4e-85 320.1 185 82.2
MSTRG.17300 Avicennia marina HOM05D004213 ORTHO05D005091 1.9e-85 319.7 227 70.0
Lsat_1_v5_gn_7_2701 Lactuca sativa HOM05D004213 ORTHO05D005091 2.4e-85 319.3 237 67.1
Aqoxy5G03866 Aquilegia oxysepala HOM05D004213 ORTHO05D005091 2.7e-84 315.8 225 66.7
ECA236G3941 Erigeron canadensis HOM05D004213 ORTHO05D005091 7.8e-84 314.3 238 65.5
Lj9A590G54 Lonicera japonica HOM05D004213 ORTHO05D005091 1.2e-79 300.4 236 66.9
Rhsim09G0104800 Rhododendron simsii HOM05D004213 ORTHO05D005091 1.5e-79 300.1 193 78.8
Gorai.009G392100 Gossypium raimondii HOM05D004213 ORTHO05D005091 8.4e-78 294.3 227 67.0
Solyc04g009140.4 Solanum lycopersicum HOM05D004213 ORTHO05D005091 1.2e-76 290.4 180 77.8
FAN06G0959 Fragaria x ananassa HOM05D004213 ORTHO05D005091 5.6e-74 281.6 186 74.2
Cpa.g.sc11.71 Carica papaya HOM05D004213 ORTHO05D005091 7.3e-74 281.2 233 62.2
BolC4t28619H Brassica oleracea HOM05D005821 ORTHO05D005091 1.8e-72 276.6 212 63.2
Nn1g07699 Nelumbo nucifera HOM05D004213 ORTHO05D005091 3.8e-70 268.9 221 62.9
Gohir.D04G091100 Gossypium hirsutum HOM05D004213 ORTHO05D005091 7.3e-66 254.6 162 75.9
SEGI_36995 Sequoiadendron giganteum HOM05D004213 ORTHO05D005091 2.1e-65 253.1 211 56.4
Sc16g0003870 Simmondsia chinensis HOM05D004213 ORTHO05D005091 6.9e-64 248.1 190 68.4
DCAR_009468 Daucus carota HOM05D004213 ORTHO05D005091 1.2e-63 247.3 157 72.6
CAN.G472.27 Capsicum annuum HOM05D004213 ORTHO05D005091 2.6e-63 246.1 161 75.2
Prupe.2G231400 Prunus persica HOM05D004213 ORTHO05D005091 4.9e-54 215.3 145 75.2
Pp3c13_9680 Physcomitrium patens HOM05D004213 ORTHO05D005091 7.9e-52 208.0 225 48.0
COL.COLO4_07824 Corchorus olitorius HOM05D004213 ORTHO05D005091 1.0e-51 207.6 186 58.1
AagrBONN_evm.TU.Sc2ySwM_228.381 Anthoceros agrestis HOM05D004213 ORTHO05D005091 1.8e-51 206.8 236 48.7
Mapoly0025s0100 Marchantia polymorpha HOM05D004213 ORTHO05D005091 6.7e-51 204.9 211 49.8
AagrBONN_evm.TU.Sc2ySwM_117.3677 Anthoceros agrestis HOM05D004213 ORTHO05D005091 3.3e-50 202.6 236 48.3
CARHR141400 Cardamine hirsuta HOM05D004213 ORTHO05D005091 3.7e-49 199.1 183 57.4
MBI16_g10331_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 5.8e-47 191.8 120 73.3
Medtr7g117435 Medicago truncatula HOM05D004213 ORTHO05D005091 3.8e-46 189.1 132 66.7
CBR_g37539 Chara braunii HOM05D004213 ORTHO05D005091 2.2e-38 163.3 209 41.1
Atru.chr1.2758 Acer truncatum HOM05D004213 ORTHO05D005091 9.3e-37 157.9 90 80.0
C04p01920 Brassica napus HOM05D004213 ORTHO05D005091 9.3e-37 157.9 152 52.6
EL10Ac6g15290 Beta vulgaris HOM05D004213 ORTHO05D012437 2.3e-35 153.3 99 69.7
MD05G1056600 Malus domestica HOM05D004213 ORTHO05D005091 3.9e-35 152.5 158 53.2
VMungo0331G0027 Vigna mungo HOM05D004213 ORTHO05D005091 2.2e-33 146.7 93 77.4
SMO271G0103 Selaginella moellendorffii HOM05D004213 ORTHO05D005091 2.5e-29 133.3 216 37.0
MBI16_g18199_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 3.0e-27 126.3 100 66.0
SHI13371 Sapria himalayana HOM05D004213 ORTHO05D005091 1.1e-26 124.4 105 61.9
BcaC02g12495 Brassica carinata HOM05D004213 ORTHO05D005091 1.2e-23 114.4 90 60.0
CAN.G467.8 Capsicum annuum HOM05D004213 ORTHO05D005091 2.9e-22 109.8 73 75.3
MCO04G325 Micromonas commoda HOM05D004213 ORTHO05D005091 1.1e-21 107.8 195 32.8
FAN06G3959 Fragaria x ananassa HOM05D004213 ORTHO05D005091 9.4e-21 104.8 76 72.4
PGSC0003DMG402011505 Solanum tuberosum HOM05D004213 ORTHO05D005091 1.6e-20 104.0 67 74.6
FAN01G2862 Fragaria x ananassa HOM05D004213 ORTHO05D005091 3.6e-20 102.8 76 71.1
FAN01G2126 Fragaria x ananassa HOM05D004065 ORTHO05D004806 6.1e-20 102.1 75 72.0
FvH4_7g22001 Fragaria vesca HOM05D004065 ORTHO05D004806 1.0e-19 101.3 75 70.7
Cre03.g193550 Chlamydomonas reinhardtii HOM05D004213 ORTHO05D005091 4.4e-18 95.9 244 29.5
SMO308G0077 Selaginella moellendorffii HOM05D004213 ORTHO05D005091 6.3e-17 92.0 124 39.5
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 7.0e-16 88.6 52 82.7
Aa31LG5G23500 Aethionema arabicum HOM05D004213 ORTHO05D005091 4.5e-15 85.9 70 65.7
FAN03G3471 Fragaria x ananassa HOM05D004213 ORTHO05D005091 7.2e-13 78.6 48 77.1
PGSC0003DMG401011505 Solanum tuberosum HOM05D004213 ORTHO05D005091 6.1e-12 75.5 53 73.6
Cfa024785 Carpinus fangiana HOM05D004213 ORTHO05D122664 2.3e-11 73.6 139 36.0
Rhsim07G0218600 Rhododendron simsii HOM05D004213 ORTHO05D339259 2.0e-10 70.5 40 75.0
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 2.8e-09 66.6 54 66.7
Ah.13g065600 Amaranthus hybridus HOM05D000001 ORTHO05D010162 2.0e-07 60.5 33 84.8
RcHm_v2.0_Chr1g0366151 Rosa chinensis HOM05D004213 ORTHO05D005091 5.9e-07 58.9 42 61.9


User provided reference genes

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