Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 2.3e-263 911.8 484 100.0
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 2.8e-176 622.5 598 61.5
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.1e-159 567.4 479 66.8
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.2e-139 500.7 523 56.8
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 3.6e-139 499.2 523 56.6
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 3.0e-138 496.1 462 61.0
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 7.2e-124 448.4 488 56.1
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 3.3e-121 439.5 479 52.6
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 7.5e-105 385.2 447 53.9
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 3.5e-102 376.3 525 45.9
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 3.5e-102 376.3 532 46.1
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 4.2e-100 369.4 485 48.2
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 2.1e-99 367.1 468 48.9
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 1.0e-98 364.8 485 47.6
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 1.8e-98 364.0 474 48.5
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 8.9e-98 361.7 482 47.7
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 3.4e-97 359.8 493 46.5
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 4.4e-97 359.4 488 47.1
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 4.9e-96 355.9 505 44.2
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.1e-95 354.8 497 46.3
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.4e-95 354.4 534 44.0
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 3.1e-95 353.2 497 46.3
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 2.7e-94 350.1 498 45.8
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.7e-93 347.4 478 44.6
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.1e-92 344.7 493 45.2
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 1.9e-92 344.0 562 42.2
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 7.3e-92 342.0 477 45.5
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 2.8e-91 340.1 481 45.1
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 2.8e-91 340.1 458 46.5
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 8.0e-91 338.6 481 44.9
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 3.7e-88 329.7 481 45.9
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.4e-87 327.0 412 46.4
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 2.4e-87 327.0 431 48.5
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 9.2e-87 325.1 430 48.6
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.6e-86 324.3 479 44.5
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 1.7e-85 320.9 476 46.8
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 2.3e-85 320.5 477 44.0
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 4.0e-82 309.7 477 43.0
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 1.7e-80 304.3 494 43.9
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 1.9e-79 300.8 490 45.1
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 3.2e-79 300.1 478 45.0
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 1.6e-78 297.7 323 54.2
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.6e-78 297.7 518 42.1
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 6.0e-78 295.8 357 48.5
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 5.1e-77 292.7 514 41.1
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 1.1e-76 291.6 512 39.6
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 1.1e-76 291.6 524 39.7
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.9e-76 290.8 532 40.0
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 3.3e-76 290.0 466 41.6
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 3.3e-76 290.0 470 44.0
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 2.1e-75 287.3 447 41.6
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 2.1e-75 287.3 481 39.9
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 3.6e-75 286.6 488 43.4
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.4e-74 284.6 522 38.7
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.5e-73 281.2 494 43.3
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 4.4e-73 279.6 520 41.9
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 2.2e-72 277.3 567 38.3
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 8.3e-72 275.4 570 37.7
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.9e-71 274.2 479 41.1
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 4.1e-71 273.1 558 39.1
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 1.6e-70 271.2 566 37.3
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 2.1e-70 270.8 516 39.3
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 1.7e-69 267.7 544 38.2
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 3.9e-69 266.5 455 40.9
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.9e-68 264.2 479 41.1
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 3.6e-67 260.0 559 37.6
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 1.4e-66 258.1 309 48.9
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.8e-66 257.7 605 35.0
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 3.1e-66 256.9 485 41.2
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 6.8e-66 255.8 520 39.8
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 8.9e-66 255.4 566 37.6
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.2e-65 255.0 351 45.0
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 5.8e-65 252.7 338 46.7
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 9.9e-65 251.9 447 41.8
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 2.9e-64 250.4 531 37.1
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.1e-63 248.4 430 40.2
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 3.2e-63 246.9 479 38.6
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 4.2e-63 246.5 404 42.1
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 2.7e-62 243.8 465 39.8
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 4.6e-62 243.0 573 36.5
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 1.3e-61 241.5 403 41.4
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.9e-60 237.7 518 36.3
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 2.5e-60 237.3 486 36.6
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 1.6e-59 234.6 365 42.2
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 2.1e-59 234.2 406 38.7
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 6.2e-59 232.6 387 42.9
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.1e-58 231.9 533 34.9
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 3.4e-57 226.9 526 37.5
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 7.6e-57 225.7 361 42.7
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 3.8e-56 223.4 471 38.0
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 4.9e-56 223.0 558 33.3
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.6e-54 218.0 511 32.1
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 6.0e-54 216.1 516 32.6
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.6e-51 208.0 515 36.1
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 3.1e-50 203.8 478 35.6
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.2e-49 201.8 367 39.5
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 1.3e-45 188.3 593 32.2
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 1.3e-43 181.8 438 34.0
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 2.1e-43 181.0 482 35.9
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 2.8e-43 180.6 470 33.0
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 2.4e-42 177.6 431 33.6
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 2.0e-41 174.5 577 31.0
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 2.0e-41 174.5 577 31.0
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 2.6e-41 174.1 579 30.7
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.6e-41 174.1 266 44.7
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 1.3e-40 171.8 577 31.2
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.1e-39 168.7 506 31.8
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 9.3e-39 165.6 408 34.3
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 4.3e-36 156.8 211 48.3
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 1.6e-35 154.8 648 27.2
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 3.7e-35 153.7 459 32.7
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 8.2e-35 152.5 635 28.7
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.5e-31 141.0 213 42.3
Rhsim03G0191000 Rhododendron simsii HOM05D006489 ORTHO05D007556 4.2e-31 140.2 309 39.5
Rhsim02G0082000 Rhododendron simsii HOM05D000432 ORTHO05D000320 4.5e-25 120.2 106 66.0
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 6.5e-24 116.3 523 27.5
Rhsim04G0033600 Rhododendron simsii HOM05D000945 ORTHO05D007556 6.7e-21 106.3 66 78.8
RhsimUnG0174200 Rhododendron simsii HOM05D000945 ORTHO05D007556 3.7e-19 100.5 66 75.8
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 1.4e-15 88.6 65 64.6
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 5.5e-15 86.7 100 48.0
Mapoly0045s0076 Marchantia polymorpha HOM05D006489 ORTHO05D007556 1.2e-06 58.9 196 27.6


User provided reference genes

Program Settings