Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 3.8e-55 218.0 115 100.0
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 5.5e-22 107.8 109 61.5
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 2.2e-18 95.9 98 62.2
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 9.4e-14 80.5 107 49.5
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 1.6e-13 79.7 86 52.3
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 2.7e-13 79.0 110 50.0
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 4.6e-13 78.2 49 75.5
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 6.1e-13 77.8 88 51.1
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 6.1e-13 77.8 100 46.0
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 7.9e-13 77.4 96 44.8
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 1.4e-12 76.6 48 79.2
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 1.4e-12 76.6 90 47.8
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 1.8e-12 76.3 99 42.4
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 3.9e-12 75.1 85 48.2
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 5.1e-12 74.7 73 54.8
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 5.1e-12 74.7 105 41.9
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 6.7e-12 74.3 63 63.5
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 8.8e-12 73.9 54 72.2
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 8.8e-12 73.9 107 42.1
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 2.0e-11 72.8 93 46.2
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 2.0e-11 72.8 101 47.5
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 2.0e-11 72.8 66 51.5
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 2.5e-11 72.4 96 45.8
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 2.5e-11 72.4 107 42.1
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 2.5e-11 72.4 65 58.5
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 3.3e-11 72.0 108 41.7
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.3e-11 71.6 52 67.3
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 4.3e-11 71.6 75 50.7
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 4.3e-11 71.6 62 62.9
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.7e-11 71.2 66 57.6
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 5.7e-11 71.2 99 43.4
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 7.4e-11 70.9 60 58.3
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 7.4e-11 70.9 66 56.1
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 7.4e-11 70.9 99 44.4
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 7.4e-11 70.9 49 71.4
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 9.7e-11 70.5 60 55.0
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 9.7e-11 70.5 50 66.0
CSS0028012 Camellia sinensis var. sinensis HOM05D054735 ORTHO05D009474 1.3e-10 70.1 97 51.5
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 1.3e-10 70.1 101 46.5
CSS0047920 Camellia sinensis var. sinensis HOM05D054735 ORTHO05D009474 1.7e-10 69.7 90 52.2
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.7e-10 69.7 66 56.1
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 1.7e-10 69.7 61 62.3
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.2e-10 69.3 99 43.4
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 2.2e-10 69.3 61 50.8
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 2.8e-10 68.9 109 36.7
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 6.3e-10 67.8 49 69.4
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 8.2e-10 67.4 116 42.2
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 8.2e-10 67.4 89 49.4
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 8.2e-10 67.4 74 51.4
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 1.1e-09 67.0 44 72.7
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 1.1e-09 67.0 55 61.8
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 1.4e-09 66.6 50 66.0
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 1.8e-09 66.2 90 43.3
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 2.4e-09 65.9 75 50.7
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 2.4e-09 65.9 84 45.2
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 2.4e-09 65.9 86 45.3
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 2.4e-09 65.9 71 57.7
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 2.4e-09 65.9 71 57.7
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 2.4e-09 65.9 76 48.7
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 3.1e-09 65.5 60 58.3
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 3.1e-09 65.5 96 41.7
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 4.1e-09 65.1 74 56.8
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 4.1e-09 65.1 70 54.3
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 5.3e-09 64.7 56 58.9
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 9.1e-09 63.9 58 53.4
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 9.1e-09 63.9 58 53.4
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 9.1e-09 63.9 58 53.4
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 9.1e-09 63.9 58 53.4
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 1.2e-08 63.5 79 45.6
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 1.5e-08 63.2 66 51.5
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 2.0e-08 62.8 48 60.4
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 2.6e-08 62.4 58 56.9
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 2.6e-08 62.4 48 64.6
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 3.4e-08 62.0 58 50.0
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 3.4e-08 62.0 50 62.0
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 4.5e-08 61.6 58 48.3
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 4.5e-08 61.6 73 43.8
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 4.5e-08 61.6 49 65.3
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 4.5e-08 61.6 49 63.3
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 1.0e-07 60.5 110 33.6
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 1.7e-07 59.7 52 59.6
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 2.2e-07 59.3 95 38.9
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 2.2e-07 59.3 58 46.6
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 3.8e-07 58.5 81 40.7
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 3.8e-07 58.5 56 57.1
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 5.0e-07 58.2 60 50.0
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 8.5e-07 57.4 71 49.3
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 1.1e-06 57.0 40 65.0
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 1.4e-06 56.6 103 37.9
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 4.2e-06 55.1 90 40.0
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 4.2e-06 55.1 45 62.2
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 5.5e-06 54.7 93 37.6


User provided reference genes

Program Settings