Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 0.0e+00 1839.3 990 100.0
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 0.0e+00 1132.9 1048 66.0
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 5.4e-259 898.3 996 58.9
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.7e-257 893.3 996 58.7
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 1.9e-243 846.7 956 58.3
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 3.0e-217 759.6 976 52.4
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 4.3e-192 676.0 867 53.6
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 2.6e-173 613.6 1016 45.5
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 5.5e-155 552.7 978 44.1
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 9.4e-155 552.0 974 44.4
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 9.4e-155 552.0 1023 42.2
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 5.9e-149 532.7 967 44.2
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 1.2e-146 525.0 957 43.1
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 3.6e-146 523.5 993 42.1
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 4.0e-145 520.0 976 42.3
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 2.9e-143 513.8 961 41.9
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 2.1e-138 497.7 1045 40.7
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 2.3e-137 494.2 978 40.3
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 1.7e-135 488.0 971 41.9
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 6.4e-135 486.1 983 41.3
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 1.3e-132 478.4 903 42.6
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 8.6e-132 475.7 996 40.8
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 4.3e-131 473.4 960 39.0
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 1.2e-130 471.9 960 40.6
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.8e-130 470.7 956 42.7
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.8e-129 468.0 961 41.5
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.3e-129 467.6 963 41.8
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.5e-128 464.9 967 41.3
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 9.8e-128 462.2 982 40.5
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.3e-127 461.8 989 40.8
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 1.4e-126 458.4 977 40.8
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 3.5e-125 453.8 966 39.3
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 6.0e-125 453.0 972 41.3
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 8.6e-124 449.1 967 39.2
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 2.5e-123 447.6 971 39.0
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 5.6e-123 446.4 961 41.7
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 2.8e-122 444.1 973 39.6
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 4.7e-122 443.4 900 41.0
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 4.0e-121 440.3 784 44.6
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 9.9e-120 435.6 953 39.6
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 2.9e-119 434.1 961 39.1
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 3.8e-119 433.7 930 40.6
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 1.2e-117 428.7 901 39.4
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 3.5e-117 427.2 967 40.7
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 1.0e-116 425.6 978 37.9
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 6.6e-116 422.9 902 41.7
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 1.2e-114 418.7 953 40.2
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 4.7e-114 416.8 982 39.2
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 6.9e-113 412.9 851 40.3
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 8.9e-113 412.5 984 38.4
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 1.5e-112 411.8 978 38.4
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 5.8e-112 409.8 964 38.7
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 2.2e-111 407.9 968 36.9
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 4.9e-111 406.8 977 38.3
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 3.2e-110 404.1 863 40.3
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 9.3e-110 402.5 969 37.7
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 4.6e-109 400.2 945 38.6
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 3.0e-108 397.5 986 37.7
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 8.7e-108 396.0 962 37.7
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 8.7e-108 396.0 981 38.7
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 1.6e-106 391.7 980 38.2
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 8.1e-106 389.4 899 38.8
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 6.9e-105 386.3 965 38.4
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 1.5e-104 385.2 991 37.5
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 5.8e-104 383.3 881 39.4
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 9.9e-104 382.5 755 41.1
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 3.8e-103 380.6 904 38.9
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 1.4e-102 378.6 989 36.9
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 1.9e-102 378.3 981 37.9
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 5.4e-102 376.7 969 36.9
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 6.0e-101 373.2 436 53.4
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 7.9e-101 372.9 427 54.3
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.3e-100 372.1 1012 37.3
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.5e-99 368.6 989 37.0
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 2.5e-99 367.9 993 37.4
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 9.6e-99 365.9 976 34.9
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 6.2e-98 363.2 758 40.9
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 5.3e-97 360.1 854 37.9
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 9.0e-97 359.4 981 36.9
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 1.5e-96 358.6 960 36.4
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 1.2e-93 349.0 971 35.9
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 7.4e-91 339.7 1008 35.6
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 6.9e-89 333.2 803 37.6
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 4.5e-88 330.5 1050 34.5
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 2.2e-87 328.2 883 35.1
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 2.5e-86 324.7 980 35.3
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 2.5e-86 324.7 982 34.0
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 2.7e-85 321.2 1035 33.8
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 3.9e-84 317.4 806 37.2
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 2.5e-83 314.7 870 36.4
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 3.7e-82 310.8 1011 33.8
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 3.4e-80 304.3 1011 33.3
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 3.8e-79 300.8 975 33.7
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 8.5e-79 299.7 875 36.0
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 1.1e-78 299.3 963 32.4
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 1.3e-76 292.4 982 33.2
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 1.1e-73 282.7 994 32.0
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 4.5e-72 277.3 952 32.4
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 7.7e-72 276.6 1106 32.4
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 1.7e-71 275.4 711 36.8
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 2.2e-71 275.0 966 32.7
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 1.9e-70 271.9 931 33.8
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 8.2e-66 256.5 910 31.0
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 2.0e-64 251.9 919 31.4
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 1.7e-63 248.8 1006 30.9
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 1.4e-62 245.7 977 30.9
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 1.9e-62 245.4 846 33.1
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 2.1e-61 241.9 805 32.4
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 1.0e-60 239.6 830 32.5
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 7.7e-56 223.4 934 31.0
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 5.0e-55 220.7 941 31.6
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 2.6e-51 208.4 944 31.0
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 7.0e-41 173.7 148 66.2
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 7.7e-40 170.2 249 49.8
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 2.5e-38 165.2 197 54.8
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 5.4e-33 147.5 294 46.6
Hma1.2p1_3473F.1_g336230 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 1.5e-27 129.4 102 69.6
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 8.3e-26 123.6 150 52.7
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 1.9e-22 112.5 224 38.8
PSO782G1978 Papaver somniferum HOM05D005351 ORTHO05D006542 2.3e-20 105.5 461 35.1
CiPaw.12G140800 Carya illinoinensis HOM05D005351 ORTHO05D006542 8.9e-20 103.6 146 46.6
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 5.8e-19 100.9 133 47.4
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 9.2e-17 93.6 236 39.4
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 7.8e-16 90.5 115 58.3
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 2.8e-13 82.0 1087 24.9
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 8.9e-12 77.0 153 37.3
Peaxi162Scf00018g00154 Petunia axillaris HOM05D005351 ORTHO05D006542 1.5e-11 76.3 60 68.3
Solyc10g005860.3 Solanum lycopersicum HOM05D005351 ORTHO05D006542 1.7e-10 72.8 60 66.7
HPP92_028499 Vanilla planifolia HOM05D005351 ORTHO05D006542 7.8e-08 63.9 86 52.3
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 5.1e-07 61.2 76 46.1
Oeu017995.1 Olea europaea HOM05D005351 ORTHO05D006542 1.5e-06 59.7 201 34.8
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 5.6e-06 57.8 1017 23.2
Cc00_g23250 Coffea canephora HOM05D000874 ORTHO05D001049 9.5e-06 57.0 37 64.9


User provided reference genes

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