Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 1.1e-202 710.3 529 100.0
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 9.9e-119 431.4 533 65.5
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 4.8e-81 306.2 525 39.8
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.8e-80 304.3 549 39.2
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 5.9e-79 299.3 549 39.0
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 1.4e-67 261.5 524 42.9
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 4.1e-56 223.4 273 48.0
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.6e-52 211.5 281 48.0
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 3.6e-52 210.3 279 45.9
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 1.4e-51 208.4 284 46.1
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 2.3e-51 207.6 270 46.7
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 1.5e-50 204.9 232 51.7
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 2.6e-50 204.1 275 44.4
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 7.5e-50 202.6 280 47.1
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 9.8e-50 202.2 245 45.3
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 3.7e-49 200.3 281 46.6
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 3.7e-49 200.3 530 32.1
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 6.4e-49 199.5 215 54.4
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 6.4e-49 199.5 238 49.6
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 6.4e-49 199.5 275 42.5
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 1.9e-48 198.0 234 50.0
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 2.4e-48 197.6 234 49.6
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 1.2e-47 195.3 274 44.9
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 3.5e-47 193.7 274 44.9
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 7.8e-47 192.6 275 46.2
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 3.0e-46 190.7 244 47.1
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 5.0e-46 189.9 284 45.1
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.0e-46 189.9 284 44.7
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 6.6e-46 189.5 286 43.4
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 8.6e-46 189.1 284 44.7
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 8.6e-46 189.1 244 46.7
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.9e-45 188.0 290 44.1
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 5.6e-45 186.4 246 46.7
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 6.2e-44 183.0 273 42.5
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 8.0e-44 182.6 232 48.3
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 2.3e-43 181.0 257 42.4
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 6.8e-43 179.5 284 43.3
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 8.9e-43 179.1 234 44.4
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 2.0e-42 177.9 242 43.4
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.0e-42 177.9 241 43.2
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 2.6e-42 177.6 276 42.4
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 7.5e-42 176.0 268 41.4
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 8.3e-41 172.6 257 44.0
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 8.3e-41 172.6 271 41.7
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 1.1e-40 172.2 263 41.1
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 1.4e-40 171.8 260 40.4
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 2.4e-40 171.0 261 41.8
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 3.2e-40 170.6 226 45.6
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 4.1e-40 170.2 272 40.4
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 5.4e-40 169.9 226 42.9
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 9.2e-40 169.1 234 41.5
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 1.6e-39 168.3 250 41.2
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 1.6e-39 168.3 239 42.3
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 2.1e-39 167.9 226 42.5
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 6.0e-39 166.4 261 42.1
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 6.0e-39 166.4 193 48.2
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 7.8e-39 166.0 226 45.1
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 7.8e-39 166.0 225 43.6
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 1.0e-38 165.6 237 43.5
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 1.3e-38 165.2 264 41.3
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.3e-38 164.5 204 45.6
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 3.9e-38 163.7 271 38.4
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 3.9e-38 163.7 226 41.2
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 6.6e-38 162.9 209 43.1
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 2.5e-37 161.0 207 45.9
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 2.5e-37 161.0 206 46.6
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 3.3e-37 160.6 253 41.5
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 5.6e-37 159.8 207 46.4
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 5.6e-37 159.8 244 41.4
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 5.6e-37 159.8 253 41.1
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 5.6e-37 159.8 207 46.9
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 7.3e-37 159.5 243 40.7
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 9.5e-37 159.1 250 40.0
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 9.5e-37 159.1 255 42.4
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.2e-36 158.7 243 40.7
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 1.2e-36 158.7 264 41.3
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.6e-36 158.3 250 40.0
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 2.1e-36 157.9 232 43.1
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 3.6e-36 157.1 263 41.4
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 4.7e-36 156.8 209 44.5
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 8.1e-36 156.0 252 40.5
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 1.1e-35 155.6 288 36.8
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 1.1e-35 155.6 245 38.8
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.4e-35 155.2 244 40.2
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 6.8e-35 152.9 262 38.9
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 1.5e-34 151.8 252 40.1
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 2.0e-34 151.4 262 39.3
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 2.6e-34 151.0 232 41.4
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 3.4e-34 150.6 236 39.0
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 4.4e-34 150.2 250 37.2
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.7e-33 148.3 250 38.0
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 2.2e-33 147.9 210 42.9
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 8.3e-33 146.0 229 38.9
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 8.3e-33 146.0 201 43.8
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 2.4e-32 144.4 252 36.9
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 6.0e-31 139.8 230 38.7
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.1e-29 135.6 236 38.6
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 2.1e-28 131.3 93 63.4
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 6.2e-20 103.2 94 54.3
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 8.1e-20 102.8 373 28.2
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 2.2e-17 94.7 131 47.3
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 5.4e-16 90.1 91 42.9
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.6e-15 88.6 213 30.0
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 2.3e-14 84.7 120 40.8
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 2.3e-14 84.7 92 43.5
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 3.3e-13 80.9 237 28.3
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 1.6e-12 78.6 70 50.0
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 6.9e-11 73.2 205 27.3


User provided reference genes

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