Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09590 Vaccinium macrocarpon HOM05D002303 ORTHO05D007639 1.4e-81 306.2 152 100.0
Actinidia18732 Actinidia chinensis HOM05D002303 ORTHO05D007639 2.0e-48 196.1 151 70.2
RhsimUnG0255200 Rhododendron simsii HOM05D002303 ORTHO05D007639 1.1e-46 190.3 149 67.8
Oeu052326.1 Olea europaea HOM05D002303 ORTHO05D007639 3.1e-33 145.6 151 54.3
QL08p014652 Quercus lobata HOM05D002303 ORTHO05D007639 1.0e-31 140.6 168 48.8
Dinv02835 Davidia involucrata HOM05D002303 ORTHO05D007639 1.5e-30 136.7 133 61.7
TAR624G0310 Trochodendron aralioides HOM05D002303 ORTHO05D007639 1.6e-29 133.3 147 55.1
Actinidia35299 Actinidia chinensis HOM05D002303 ORTHO05D007639 2.7e-29 132.5 152 53.3
Haze_09569 Corylus avellana HOM05D002303 ORTHO05D007639 1.4e-28 130.2 174 44.8
Cfa020474 Carpinus fangiana HOM05D002303 ORTHO05D007639 8.8e-28 127.5 159 46.5
Sabra16G0280700 Salix brachista HOM05D002303 ORTHO05D007639 9.8e-27 124.0 157 45.9
GSVIVG01014543001 Vitis vinifera HOM05D002303 ORTHO05D007639 4.8e-26 121.7 148 52.7
Nitab4.5_0002113g0100 Nicotiana tabacum HOM05D002303 ORTHO05D007639 8.3e-26 120.9 161 47.8
PGSC0003DMG400032540 Solanum tuberosum HOM05D002303 ORTHO05D007639 8.3e-26 120.9 153 46.4
Sabra16G0276300 Salix brachista HOM05D002303 ORTHO05D007639 1.1e-25 120.6 157 45.2
MD03G1215900 Malus domestica HOM05D002303 ORTHO05D007639 1.8e-25 119.8 153 47.1
Potri.001G410500 Populus trichocarpa HOM05D002303 ORTHO05D007639 2.4e-25 119.4 165 45.5
Solyc04g009360.3 Solanum lycopersicum HOM05D002303 ORTHO05D007639 2.4e-25 119.4 153 45.8
COL.COLO4_09527 Corchorus olitorius HOM05D002303 ORTHO05D007639 4.1e-25 118.6 162 46.3
MD11G1230500 Malus domestica HOM05D002303 ORTHO05D007639 4.1e-25 118.6 157 46.5
Sopen04g004480 Solanum pennellii HOM05D002303 ORTHO05D007639 4.1e-25 118.6 153 45.8
CiPaw.11G180000 Carya illinoinensis HOM05D002303 ORTHO05D007639 9.1e-25 117.5 168 43.5
Ciclev10008307m.g Citrus clementina HOM05D002303 ORTHO05D007639 9.1e-25 117.5 154 50.6
Cc05_g12930 Coffea canephora HOM05D002303 ORTHO05D007639 2.7e-24 115.9 151 45.7
Atru.chr2.3118 Acer truncatum HOM05D002303 ORTHO05D007639 1.0e-23 114.0 169 47.3
Atru.chr2.3125 Acer truncatum HOM05D002303 ORTHO05D007639 1.0e-23 114.0 169 47.3
PGR083G0747 Punica granatum HOM05D002303 ORTHO05D007639 1.3e-23 113.6 154 44.2
FAN11G3805 Fragaria x ananassa HOM05D002303 ORTHO05D007639 5.0e-23 111.7 161 44.1
Peaxi162Scf00760g00026 Petunia axillaris HOM05D002303 ORTHO05D007639 8.5e-23 110.9 154 44.2
Duzib268G0512 Durio zibethinus HOM05D002303 ORTHO05D007639 2.5e-22 109.4 160 45.0
Thecc.07G058600 Theobroma cacao HOM05D002303 ORTHO05D007639 2.5e-22 109.4 154 46.8
RcHm_v2.0_Chr5g0036881 Rosa chinensis HOM05D002303 ORTHO05D007639 3.2e-22 109.0 166 42.8
Nn1g03778 Nelumbo nucifera HOM05D002303 ORTHO05D007639 5.5e-22 108.2 145 49.0
PSO210G2368 Papaver somniferum HOM05D002303 ORTHO05D007639 9.5e-22 107.5 149 45.0
Nitab4.5_0007261g0030 Nicotiana tabacum HOM05D002303 ORTHO05D007639 2.1e-21 106.3 152 44.1
FAN16G0687 Fragaria x ananassa HOM05D002303 ORTHO05D007639 8.0e-21 104.4 160 41.9
FAN21G1165 Fragaria x ananassa HOM05D002303 ORTHO05D007639 1.4e-20 103.6 159 42.1
AUR62041152 Chenopodium quinoa HOM05D002303 ORTHO05D007639 1.8e-20 103.2 155 46.5
HanXRQChr05g0158911 Helianthus annuus HOM05D002303 ORTHO05D007639 4.0e-20 102.1 146 43.2
Actinidia35293 Actinidia chinensis HOM05D002303 ORTHO05D007639 5.2e-20 101.7 106 53.8
Glyma.20G140800 Glycine max HOM05D002303 ORTHO05D007639 6.8e-20 101.3 149 43.0
AUR62029279 Chenopodium quinoa HOM05D002303 ORTHO05D007639 2.0e-19 99.8 151 43.7
Lsat_1_v5_gn_8_163300 Lactuca sativa HOM05D002303 ORTHO05D007639 2.0e-19 99.8 149 45.6
Lj3g0023309 Lotus japonicus HOM05D002303 ORTHO05D007639 2.6e-19 99.4 151 40.4
MELO3C016614.2 Cucumis melo HOM05D002303 ORTHO05D007639 5.7e-19 98.2 155 42.6
Manes.15G080400 Manihot esculenta HOM05D002303 ORTHO05D007639 5.7e-19 98.2 172 41.3
Phvul.011G153301 Phaseolus vulgaris HOM05D002303 ORTHO05D007639 9.8e-19 97.4 159 40.9
Gorai.002G079300 Gossypium raimondii HOM05D002303 ORTHO05D007639 1.7e-18 96.7 160 41.9
THA.LOC104809285 Tarenaya hassleriana HOM05D002303 ORTHO05D007639 1.7e-18 96.7 166 39.2
Gohir.A01G071600 Gossypium hirsutum HOM05D002303 ORTHO05D007639 2.2e-18 96.3 156 41.7
ECA246G5178 Erigeron canadensis HOM05D002303 ORTHO05D007639 2.8e-18 95.9 148 43.9
Eucgr.F03385 Eucalyptus grandis HOM05D002303 ORTHO05D007639 1.1e-17 94.0 101 51.5
TWI38G2363 Tripterygium wilfordii HOM05D002303 ORTHO05D007639 2.4e-17 92.8 160 40.0
Thhalv10013494m.g Eutrema salsugineum HOM05D002303 ORTHO05D007639 5.4e-17 91.7 174 36.2
VMungo1127G1472 Vigna mungo HOM05D002303 ORTHO05D007639 7.0e-17 91.3 150 42.7
Migut.M01837 Erythranthe guttata HOM05D002303 ORTHO05D007639 1.2e-16 90.5 162 38.9
ATR0804G071 Amborella trichopoda HOM05D002303 ORTHO05D007639 2.7e-16 89.4 150 38.7
Hma1.2p1_0151F.1_g067160 Hydrangea macrophylla HOM05D002303 ORTHO05D007639 2.7e-16 89.4 103 56.3
Hma1.2p1_0151F.1_g067161 Hydrangea macrophylla HOM05D002303 ORTHO05D007639 2.7e-16 89.4 103 56.3
Carub.0008s1480 Capsella rubella HOM05D002303 ORTHO05D007639 5.9e-16 88.2 167 32.9
SGA_v2.0_scaffold495G52459 Striga asiatica HOM05D002303 ORTHO05D007639 7.8e-16 87.8 155 37.4
Aa31LG3G10470 Aethionema arabicum HOM05D002303 ORTHO05D007639 2.3e-15 86.3 167 35.3
AT5G54520 Arabidopsis thaliana HOM05D002303 ORTHO05D007639 3.8e-15 85.5 174 33.9
CSS0039532 Camellia sinensis var. sinensis HOM05D002303 ORTHO05D007639 3.8e-15 85.5 99 56.6
CsaV3_3G005620 Cucumis sativus L. HOM05D002303 ORTHO05D007639 2.5e-14 82.8 161 37.9
FAN25G1148 Fragaria x ananassa HOM05D002303 ORTHO05D007639 4.3e-14 82.0 121 41.3
BcaC01g06311 Brassica carinata HOM05D002303 ORTHO05D007639 5.6e-14 81.6 168 38.1
C03p17060 Brassica napus HOM05D002303 ORTHO05D007639 5.6e-14 81.6 168 38.1
BolC3t14116H Brassica oleracea HOM05D002303 ORTHO05D007639 5.6e-14 81.6 168 38.1
Lalb_Chr01g0006291 Lupinus albus HOM05D002303 ORTHO05D007639 1.2e-13 80.5 151 37.7
A03p14600 Brassica napus HOM05D002303 ORTHO05D007639 1.6e-13 80.1 168 38.7
AL8G29890 Arabidopsis lyrata HOM05D002303 ORTHO05D007639 2.1e-13 79.7 178 33.7
Lsat_1_v5_gn_5_5021 Lactuca sativa HOM05D002303 ORTHO05D007639 4.7e-13 78.6 119 44.5
Hund23363 Selenicereus undatus HOM05D002303 ORTHO05D007639 4.7e-13 78.6 155 35.5
TPR.G10028 Trifolium pratense HOM05D002303 ORTHO05D007639 1.0e-12 77.4 153 34.6
BraA03t10750Z Brassica rapa HOM05D002303 ORTHO05D007639 1.8e-12 76.6 171 37.4
Zm00001eb118470 Zea mays HOM05D002303 ORTHO05D007639 1.8e-12 76.6 163 41.7
Zm00001eb164250 Zea mays HOM05D002303 ORTHO05D007639 1.8e-12 76.6 163 41.7
Medtr8g467040 Medicago truncatula HOM05D002303 ORTHO05D007639 3.0e-12 75.9 152 33.6
MBI02_g37283_MAGBIO Magnolia biondii HOM05D002303 ORTHO05D007639 4.0e-12 75.5 146 39.0
Pp3c11_840 Physcomitrium patens HOM05D002303 ORTHO05D007639 1.5e-11 73.6 153 36.6
BcaB01g04298 Brassica carinata HOM05D002303 ORTHO05D007639 4.4e-11 72.0 172 33.1
arahy.Tifrunner.gnm1.ann1.MFBI28 Arachis hypogaea HOM05D002303 ORTHO05D007639 9.8e-11 70.9 92 41.3
CARHR267800 Cardamine hirsuta HOM05D002303 ORTHO05D007639 9.8e-11 70.9 164 34.8
EL10Ac4g08028 Beta vulgaris HOM05D002303 ORTHO05D007639 2.9e-10 69.3 143 37.1
Sp6g16490 Schrenkiella parvula HOM05D002303 ORTHO05D007639 8.3e-10 67.8 171 31.0
Os02g0319800 Oryza sativa ssp. japonica HOM05D002303 ORTHO05D007639 1.4e-09 67.0 91 42.9
Ah.04g165230 Amaranthus hybridus HOM05D002303 ORTHO05D007639 1.8e-09 66.6 179 35.8
Ca_22984_v3 Cicer arietinum L. HOM05D002303 ORTHO05D007639 1.8e-09 66.6 231 25.5
Aqoxy1G03964 Aquilegia oxysepala HOM05D002303 ORTHO05D007639 5.9e-08 61.6 153 33.3
DCAR_008699 Daucus carota HOM05D002303 ORTHO05D007639 1.3e-07 60.5 203 27.6
unitig_8.g3262 Utricularia gibba HOM05D002303 ORTHO05D007639 3.0e-07 59.3 53 49.1
Glyma.12G141200 Glycine max HOM05D002303 ORTHO05D007639 2.5e-06 56.2 77 48.1
Cpa.g.sc80.129 Carica papaya HOM05D002303 ORTHO05D007639 4.3e-06 55.5 95 44.2
Glyma.12G141100 Glycine max HOM05D002303 ORTHO05D007639 4.3e-06 55.5 53 47.2
Mapoly0024s0099 Marchantia polymorpha HOM05D002303 ORTHO05D007639 4.3e-06 55.5 102 37.3
HPP92_022654 Vanilla planifolia HOM05D002303 ORTHO05D007639 9.5e-06 54.3 155 34.2


User provided reference genes

Program Settings