Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 2.7e-272 941.4 491 100.0
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 2.0e-185 652.9 463 77.8
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.5e-121 440.7 445 60.4
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 5.8e-121 438.7 449 58.4
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 5.1e-117 425.6 475 57.5
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 4.6e-110 402.5 457 57.8
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 7.9e-86 322.0 383 53.5
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 3.1e-82 310.1 437 49.4
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 5.5e-79 299.3 471 45.9
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 3.7e-67 260.0 487 41.1
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 9.1e-66 255.4 415 42.4
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.2e-64 250.8 476 41.4
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 1.2e-62 245.0 433 43.0
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 2.6e-60 237.3 339 48.1
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.3e-59 235.0 429 41.7
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.8e-59 233.8 420 39.8
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 4.8e-59 233.0 432 42.6
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.1e-58 230.3 415 41.4
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 5.3e-58 229.6 422 41.2
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.3e-56 224.9 437 41.0
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 2.5e-55 220.7 439 41.5
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.4e-55 218.8 437 40.7
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.4e-55 218.8 437 40.3
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.6e-54 218.0 432 37.7
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.1e-54 217.6 433 40.4
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 6.7e-53 212.6 468 37.2
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 2.6e-52 210.7 455 39.1
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 1.3e-51 208.4 459 38.1
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 2.2e-51 207.6 433 39.0
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 9.1e-50 202.2 391 43.2
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 2.2e-48 197.6 436 38.8
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.1e-47 195.3 430 37.7
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 6.8e-45 186.0 390 38.2
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 2.0e-44 184.5 437 39.8
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 3.4e-44 183.7 447 37.1
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.1e-42 178.7 435 37.5
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 1.6e-41 174.9 393 36.1
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 4.5e-41 173.3 431 38.7
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 1.5e-39 168.3 302 42.1
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.9e-39 167.9 332 39.5
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 3.2e-39 167.2 474 33.3
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 4.2e-39 166.8 325 44.6
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 4.2e-39 166.8 325 44.6
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 6.8e-37 159.5 322 37.6
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 9.8e-36 155.6 420 33.1
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 4.9e-35 153.3 354 41.5
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.8e-34 151.4 400 34.5
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 4.5e-33 146.7 468 32.7
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 4.5e-33 146.7 459 32.2
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 2.3e-32 144.4 391 35.3
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 2.5e-31 141.0 472 30.3
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.2e-30 138.7 424 35.8
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 1.2e-30 138.7 451 33.9
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 3.6e-30 137.1 445 33.7
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 8.9e-29 132.5 394 31.7
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.7e-27 128.3 270 39.3
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 2.2e-27 127.9 300 36.0
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 4.9e-27 126.7 441 32.0
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 6.4e-27 126.3 462 29.9
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.4e-26 125.2 428 33.4
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 9.2e-26 122.5 427 30.7
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 2.0e-25 121.3 435 30.6
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 2.7e-25 120.9 399 32.6
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 5.9e-25 119.8 434 32.5
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 1.7e-24 118.2 412 32.0
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 2.3e-24 117.9 400 33.0
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 3.9e-24 117.1 458 30.6
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.1e-23 115.5 551 30.1
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.3e-23 114.0 444 32.0
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 1.8e-21 108.2 379 29.8
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 1.8e-21 108.2 315 36.5
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 4.0e-21 107.1 386 32.1
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 5.8e-20 103.2 383 33.4
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 5.8e-20 103.2 422 29.4
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 7.0e-18 96.3 100 51.0
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.1e-15 89.0 453 29.4
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 4.3e-15 87.0 284 31.7
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 6.6e-08 63.2 102 37.3
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 1.9e-07 61.6 116 31.9
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 1.9e-07 61.6 406 27.6


User provided reference genes

Program Settings