Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 1.6e-291 1005.4 504 100.0
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 1.7e-237 825.9 527 81.4
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 2.4e-215 752.3 502 75.3
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 9.2e-215 750.4 499 76.2
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.6e-214 749.6 499 78.2
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 1.3e-213 746.5 504 74.8
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 1.7e-213 746.1 514 76.1
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 8.1e-211 737.3 503 74.8
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 1.2e-209 733.4 505 73.9
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 2.6e-209 732.3 504 74.2
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 2.2e-208 729.2 502 74.7
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 4.9e-208 728.0 504 73.6
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 1.9e-207 726.1 498 74.1
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 4.1e-207 724.9 504 74.2
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 5.4e-207 724.5 505 73.9
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 1.6e-206 723.0 563 69.4
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 2.7e-206 722.2 504 72.6
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 4.6e-206 721.5 525 71.8
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 6.0e-206 721.1 504 73.6
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 3.9e-205 718.4 525 71.6
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 6.6e-205 717.6 504 73.0
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 1.1e-204 716.8 479 74.7
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 1.1e-204 716.8 506 72.5
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 2.5e-204 715.7 455 78.2
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 2.5e-204 715.7 474 76.6
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 4.3e-204 714.9 504 73.0
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 7.3e-204 714.1 503 72.6
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 1.2e-203 713.4 504 72.0
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 2.1e-203 712.6 501 72.3
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 2.8e-203 712.2 500 73.0
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 4.7e-203 711.4 504 72.2
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 6.2e-203 711.1 506 71.3
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 8.1e-203 710.7 476 75.8
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 1.1e-202 710.3 504 71.4
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 1.8e-202 709.5 504 72.2
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 3.1e-202 708.8 454 77.5
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 8.9e-202 707.2 455 76.9
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 4.4e-201 704.9 504 72.0
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 7.6e-201 704.1 503 71.6
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 1.7e-200 703.0 509 70.3
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 2.2e-200 702.6 474 74.7
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 3.2e-199 698.7 502 71.9
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 3.2e-199 698.7 525 68.8
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 3.2e-199 698.7 473 75.3
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 4.2e-199 698.4 451 77.4
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 2.1e-198 696.0 482 73.4
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 7.8e-198 694.1 499 74.5
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 3.9e-197 691.8 501 70.1
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 5.1e-197 691.4 452 77.2
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 1.1e-196 690.3 458 75.1
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 4.8e-195 684.9 456 75.0
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 9.9e-193 677.2 527 68.5
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 2.2e-192 676.0 501 69.1
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 3.2e-191 672.2 484 70.9
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 3.3e-188 662.1 546 65.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 7.4e-188 661.0 445 76.6
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 2.1e-187 659.4 503 68.4
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 2.8e-187 659.1 501 69.3
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 2.9e-184 649.0 507 67.5
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 3.8e-184 648.7 487 69.6
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 1.9e-183 646.4 415 78.3
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 1.2e-182 643.7 456 71.5
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 1.3e-181 640.2 476 66.0
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 3.0e-181 639.0 450 73.8
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 1.8e-178 629.8 458 69.0
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 1.5e-177 626.7 521 64.1
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 3.4e-177 625.5 474 68.4
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 7.1e-175 617.8 453 70.4
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 5.3e-170 601.7 457 64.8
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 5.9e-169 598.2 454 64.5
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 1.4e-167 593.6 476 66.0
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 4.5e-161 572.0 483 60.2
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 4.5e-161 572.0 456 63.4
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 4.5e-153 545.4 455 59.1
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 5.9e-153 545.0 411 70.3
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 5.9e-153 545.0 413 69.5
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 3.3e-148 529.3 409 65.3
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 4.0e-125 452.6 441 53.7
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 3.7e-115 419.5 445 51.2
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 4.4e-108 396.0 220 85.0
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 3.0e-96 356.7 290 64.8
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 8.4e-83 312.0 238 70.6
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 1.5e-68 264.6 230 60.4
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 4.5e-68 263.1 230 60.0
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 4.5e-68 263.1 230 60.0
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 4.5e-68 263.1 230 60.0
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.4e-66 258.1 140 88.6
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 1.5e-60 238.0 146 79.5
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 2.4e-53 214.2 173 62.4
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 1.2e-49 201.8 138 72.5
GSVIVG01014419001 Vitis vinifera HOM05D000461 ORTHO05D009768 2.2e-38 164.5 138 68.1
arahy.Tifrunner.gnm1.ann1.AV15VC Arachis hypogaea HOM05D000296 ORTHO05D000175 9.1e-13 79.3 44 88.6
Lalb_Chr19g0134431 Lupinus albus HOM05D000461 ORTHO05D038317 2.0e-12 78.2 93 49.5
ATR0693G093 Amborella trichopoda HOM05D000461 ORTHO05D038317 1.0e-08 65.9 46 69.6
Nn1g06725 Nelumbo nucifera HOM05D000461 ORTHO05D009768 2.2e-06 58.2 43 65.1
SEGI_16587 Sequoiadendron giganteum HOM05D000415 ORTHO05D385778 6.3e-06 56.6 40 60.0


User provided reference genes

Program Settings