Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 8.7e-199 696.8 362 100.0
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 2.3e-127 459.5 362 71.5
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.7e-123 446.0 362 68.5
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.6e-118 429.5 363 67.5
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 7.5e-118 427.9 278 84.2
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 1.9e-116 423.3 362 64.4
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 2.4e-116 422.9 362 64.4
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 1.6e-115 420.2 362 64.4
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 2.3e-114 416.4 281 75.8
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 2.5e-113 412.9 294 72.4
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 7.3e-113 411.4 277 76.5
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.2e-112 410.6 281 72.6
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 2.8e-112 409.5 362 60.2
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 3.6e-112 409.1 279 74.2
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 1.1e-111 407.5 279 74.6
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.1e-111 406.0 278 73.7
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 8.9e-111 404.4 278 73.7
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 1.2e-110 404.1 361 60.1
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.0e-110 403.3 270 74.4
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 5.8e-110 401.7 281 71.5
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 5.8e-110 401.7 362 61.0
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 7.5e-110 401.4 270 74.8
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 9.9e-110 401.0 362 60.2
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 1.3e-109 400.6 269 75.5
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 2.2e-109 399.8 286 69.6
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 2.9e-109 399.4 270 74.8
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 2.9e-109 399.4 270 74.8
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 2.9e-109 399.4 279 72.8
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 2.9e-109 399.4 285 70.2
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 4.9e-109 398.7 270 74.8
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 4.9e-109 398.7 270 75.6
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 6.4e-109 398.3 270 74.8
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 6.4e-109 398.3 277 73.3
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 6.4e-109 398.3 361 59.6
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 6.4e-109 398.3 361 59.3
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 8.3e-109 397.9 363 61.4
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 8.3e-109 397.9 283 72.1
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.1e-108 397.5 285 71.2
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.1e-108 397.5 361 59.3
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.9e-108 396.7 287 70.4
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 2.4e-108 396.4 308 67.9
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 2.4e-108 396.4 270 74.4
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 2.4e-108 396.4 363 63.1
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 2.4e-108 396.4 306 66.7
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 2.4e-108 396.4 289 70.6
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 3.2e-108 396.0 270 74.1
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 3.2e-108 396.0 362 60.2
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 4.1e-108 395.6 298 69.8
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 4.1e-108 395.6 286 71.0
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 7.1e-108 394.8 298 69.8
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.2e-107 394.0 362 59.9
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 2.7e-107 392.9 315 63.5
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 6.0e-107 391.7 270 73.7
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 6.0e-107 391.7 279 72.0
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 1.0e-106 391.0 257 75.5
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.0e-106 389.4 362 58.0
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 3.0e-106 389.4 300 68.3
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 3.0e-106 389.4 285 69.1
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 5.1e-106 388.7 257 75.1
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 8.6e-106 387.9 277 70.8
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 1.5e-105 387.1 309 63.1
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 4.3e-105 385.6 293 68.3
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 7.3e-105 384.8 364 59.6
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 7.3e-105 384.8 268 70.1
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 6.2e-104 381.7 282 67.7
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 1.4e-103 380.6 293 66.6
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 1.4e-103 380.6 366 58.5
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 5.2e-103 378.6 297 66.7
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 6.8e-103 378.3 313 63.3
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 8.9e-103 377.9 279 70.6
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 9.9e-102 374.4 308 64.3
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 4.9e-101 372.1 277 69.7
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.1e-100 370.9 304 65.8
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 2.1e-99 366.7 301 64.5
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 4.6e-99 365.5 240 77.1
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 1.0e-98 364.4 302 62.9
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.3e-98 364.0 286 67.5
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.7e-98 363.6 307 63.5
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 6.6e-98 361.7 304 62.8
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 5.6e-97 358.6 277 67.1
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 9.6e-97 357.8 286 67.1
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 1.1e-95 354.4 277 64.3
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.8e-95 353.6 239 71.1
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 4.0e-95 352.4 267 67.4
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 6.9e-95 351.7 240 73.8
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 2.2e-93 346.7 270 66.7
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 3.8e-93 345.9 258 66.7
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.9e-92 343.6 241 69.7
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 6.0e-91 338.6 225 76.9
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 2.3e-90 336.7 254 65.7
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 8.7e-90 334.7 215 77.7
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.4e-87 327.4 259 64.9
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 2.6e-86 323.2 286 64.0
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 5.8e-86 322.0 364 52.5
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.7e-85 320.5 215 71.6
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 4.6e-83 312.4 226 70.4
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 4.6e-83 312.4 275 60.7
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 1.7e-77 293.9 424 45.8
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 6.0e-75 285.4 307 51.8
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 1.8e-71 273.9 283 49.5
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 3.0e-66 256.5 249 52.2
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 3.9e-66 256.1 279 49.5
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 2.2e-64 250.4 246 52.8
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 3.1e-63 246.5 213 58.7
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 8.5e-61 238.4 175 67.4
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 4.1e-55 219.5 144 71.5
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 1.3e-53 214.5 287 43.9
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.3e-48 195.7 132 74.2
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 1.9e-36 157.5 108 72.2
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.3e-32 144.8 88 84.1
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.1e-31 141.7 88 83.0
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.6e-27 127.9 81 80.2
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 4.2e-20 103.2 76 67.1
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.2e-19 101.7 66 72.7
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.8e-19 100.5 56 82.1
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 1.9e-12 77.8 261 28.7
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 4.9e-08 63.2 36 83.3
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 2.4e-07 60.8 162 37.0
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 9.2e-07 58.9 35 80.0


User provided reference genes

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