Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 1.4e-122 443.0 231 100.0
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.0e-59 234.2 163 78.5
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 3.4e-55 219.2 154 77.9
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 2.3e-51 206.5 145 75.9
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.5e-50 203.8 154 74.0
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 2.5e-50 203.0 155 72.9
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 6.2e-49 198.4 156 67.3
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 1.8e-48 196.8 163 66.9
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 2.4e-48 196.4 151 69.5
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 3.1e-48 196.1 167 65.3
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 3.1e-48 196.1 167 65.3
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 1.2e-47 194.1 163 64.4
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 3.4e-47 192.6 163 65.6
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 4.4e-47 192.2 164 65.2
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 1.7e-46 190.3 157 67.5
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.9e-46 189.5 146 69.2
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 2.9e-46 189.5 146 69.2
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 3.8e-46 189.1 155 66.5
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 3.8e-46 189.1 150 68.0
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 1.1e-45 187.6 142 71.8
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.4e-45 187.2 143 69.2
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.9e-45 186.8 152 67.1
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 1.9e-45 186.8 210 53.3
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 2.4e-45 186.4 153 65.4
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 4.2e-45 185.7 146 68.5
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 5.4e-45 185.3 155 62.6
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 5.4e-45 185.3 163 61.3
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 7.1e-45 184.9 154 64.3
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 7.1e-45 184.9 154 64.3
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 9.2e-45 184.5 163 62.0
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 9.2e-45 184.5 152 65.8
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 1.2e-44 184.1 143 70.6
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 1.6e-44 183.7 152 66.4
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 1.6e-44 183.7 163 60.7
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 1.6e-44 183.7 143 69.9
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 2.7e-44 183.0 163 60.7
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 4.6e-44 182.2 152 63.2
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 7.8e-44 181.4 143 67.1
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 1.0e-43 181.0 155 61.9
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 1.3e-43 180.6 163 60.1
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 2.3e-43 179.9 155 63.2
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 2.3e-43 179.9 162 63.0
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 3.9e-43 179.1 164 60.4
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 5.1e-43 178.7 155 65.8
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 6.6e-43 178.3 155 62.6
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 6.6e-43 178.3 155 62.6
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 8.7e-43 177.9 137 70.8
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 1.1e-42 177.6 164 59.8
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 1.1e-42 177.6 164 59.8
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.5e-42 177.2 155 61.3
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 2.5e-42 176.4 152 63.2
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 2.5e-42 176.4 152 63.2
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 2.5e-42 176.4 168 61.3
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.3e-42 175.6 144 67.4
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 5.6e-42 175.3 162 61.1
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 7.3e-42 174.9 162 60.5
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 7.3e-42 174.9 162 60.5
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 9.6e-42 174.5 164 61.0
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 9.6e-42 174.5 155 59.4
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.2e-41 174.1 166 59.6
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 1.2e-41 174.1 148 64.9
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 2.1e-41 173.3 142 62.0
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 2.8e-41 172.9 145 62.1
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 3.6e-41 172.6 143 62.9
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 3.6e-41 172.6 153 63.4
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 6.2e-41 171.8 149 63.1
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 6.2e-41 171.8 154 63.0
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 8.1e-41 171.4 152 64.5
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 1.1e-40 171.0 153 62.7
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.4e-40 169.9 158 62.7
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 3.1e-40 169.5 155 63.9
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 3.1e-40 169.5 155 63.9
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 4.0e-40 169.1 146 62.3
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 4.0e-40 169.1 152 62.5
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 4.0e-40 169.1 154 64.3
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 4.0e-40 169.1 137 67.9
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 4.0e-40 169.1 158 61.4
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 5.3e-40 168.7 153 63.4
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 6.9e-40 168.3 155 63.2
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 9.0e-40 167.9 164 59.1
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 9.0e-40 167.9 145 64.1
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 4.4e-39 165.6 152 63.2
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 9.9e-39 164.5 146 59.6
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 1.3e-38 164.1 144 59.7
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 1.7e-38 163.7 158 61.4
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 2.2e-38 163.3 157 60.5
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 2.9e-38 162.9 143 63.6
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 2.9e-38 162.9 158 60.8
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 6.4e-38 161.8 145 60.0
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 6.4e-38 161.8 150 61.3
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 1.1e-37 161.0 154 58.4
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 3.2e-37 159.5 165 54.5
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 4.2e-37 159.1 164 54.3
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 5.4e-37 158.7 164 54.3
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 5.4e-37 158.7 164 54.9
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 7.1e-37 158.3 152 56.6
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 1.2e-36 157.5 202 49.5
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 4.6e-36 155.6 145 60.0
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 1.0e-35 154.5 164 53.0
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 1.3e-35 154.1 152 55.9
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 8.7e-35 151.4 145 57.2
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 1.1e-34 151.0 123 65.0
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 5.6e-34 148.7 142 59.2
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 5.6e-34 148.7 124 66.9
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 1.6e-33 147.1 164 54.3
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 2.9e-30 136.3 123 62.6
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 1.9e-29 133.7 149 51.0
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 2.4e-29 133.3 193 48.7
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 3.2e-29 132.9 127 61.4
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 2.1e-28 130.2 125 59.2
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 5.1e-27 125.6 157 48.4
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 8.7e-27 124.8 134 53.7
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 8.1e-25 118.2 100 67.0
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 7.6e-23 111.7 72 79.2
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.9e-22 109.8 64 79.7
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 9.3e-21 104.8 57 86.0
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 1.8e-19 100.5 81 66.7
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.8e-19 100.5 58 81.0
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 3.0e-19 99.8 63 79.4
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 6.7e-19 98.6 85 63.5
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.9e-18 97.1 74 66.2
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 1.1e-16 91.3 59 74.6
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 3.1e-16 89.7 123 46.3
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.2e-15 87.8 70 70.0
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.2e-15 87.8 70 70.0
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 7.6e-15 85.1 93 57.0
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 2.2e-14 83.6 121 41.3
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 1.4e-13 80.9 52 71.2
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 1.5e-10 70.9 104 42.3
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.5e-07 59.3 46 65.2


User provided reference genes

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