Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09460 Vaccinium macrocarpon HOM05D000189 ORTHO05D008543 2.7e-82 308.5 149 100.0
vmacro09456 Vaccinium macrocarpon HOM05D000189 ORTHO05D008543 5.1e-28 128.3 86 77.9
vmacro19219 Vaccinium macrocarpon HOM05D000189 ORTHO05D008543 4.3e-27 125.2 81 80.2
vmacro20928 Vaccinium macrocarpon HOM05D000189 ORTHO05D008543 1.1e-22 110.5 81 74.1
Rhsim12G0189000 Rhododendron simsii HOM05D000189 ORTHO05D008543 4.5e-16 88.6 74 63.5
Actinidia35092 Actinidia chinensis HOM05D000189 ORTHO05D008543 1.4e-14 83.6 74 63.5
Dinv10199 Davidia involucrata HOM05D000189 ORTHO05D008543 2.4e-14 82.8 62 66.1
MD09G1144200 Malus domestica HOM05D000189 ORTHO05D008543 7.1e-14 81.3 62 64.5
Cpa.g.sc332.5 Carica papaya HOM05D000189 ORTHO05D008543 9.3e-14 80.9 62 66.1
Ciclev10011722m.g Citrus clementina HOM05D000189 ORTHO05D008543 1.2e-13 80.5 62 64.5
CSS0030038 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D008543 2.1e-13 79.7 62 64.5
FvH4_6g39230 Fragaria vesca HOM05D000189 ORTHO05D008543 2.1e-13 79.7 76 55.3
FAN02G3098 Fragaria x ananassa HOM05D000189 ORTHO05D008543 2.1e-13 79.7 76 55.3
FAN05G5772 Fragaria x ananassa HOM05D000189 ORTHO05D008543 2.1e-13 79.7 76 55.3
RcHm_v2.0_Chr2g0153071 Rosa chinensis HOM05D000189 ORTHO05D008543 2.1e-13 79.7 76 55.3
Cc01_g04970 Coffea canephora HOM05D000189 ORTHO05D008543 3.5e-13 79.0 62 62.9
Lj1C845T8 Lonicera japonica HOM05D000189 ORTHO05D008543 4.6e-13 78.6 62 62.9
QL04p063839 Quercus lobata HOM05D000189 ORTHO05D008543 4.6e-13 78.6 63 60.3
GSVIVG01015901001 Vitis vinifera HOM05D000189 ORTHO05D008543 4.6e-13 78.6 62 62.9
FAN14G3158 Fragaria x ananassa HOM05D000189 ORTHO05D008543 6.0e-13 78.2 76 53.9
CiPaw.03G108500 Carya illinoinensis HOM05D000189 ORTHO05D008543 7.9e-13 77.8 58 65.5
Haze_13663 Corylus avellana HOM05D000189 ORTHO05D008543 7.9e-13 77.8 62 61.3
QL04p063674 Quercus lobata HOM05D000004 ORTHO05D000002 7.9e-13 77.8 58 65.5
Nitab4.5_0000807g0180 Nicotiana tabacum HOM05D000189 ORTHO05D008543 1.0e-12 77.4 77 57.1
Sabra04G0000200 Salix brachista HOM05D000189 ORTHO05D008543 1.0e-12 77.4 75 56.0
Nitab4.5_0000170g0240 Nicotiana tabacum HOM05D000189 ORTHO05D008543 1.3e-12 77.0 77 55.8
Cfa023197 Carpinus fangiana HOM05D000189 ORTHO05D008543 1.8e-12 76.6 63 58.7
TWI60G0179 Tripterygium wilfordii HOM05D000189 ORTHO05D008543 1.8e-12 76.6 76 53.9
Atru.chr8.1024 Acer truncatum HOM05D000189 ORTHO05D008543 2.3e-12 76.3 57 66.7
Atru.chr8.1034 Acer truncatum HOM05D000189 ORTHO05D008543 2.3e-12 76.3 57 66.7
Aqoxy1G01367 Aquilegia oxysepala HOM05D000189 ORTHO05D008543 2.3e-12 76.3 76 52.6
arahy.Tifrunner.gnm1.ann1.0TPK9J Arachis hypogaea HOM05D000189 ORTHO05D008543 3.0e-12 75.9 75 54.7
EL10Ac6g15331 Beta vulgaris HOM05D000189 ORTHO05D008543 3.0e-12 75.9 58 62.1
Gohir.A08G050800 Gossypium hirsutum HOM05D000189 ORTHO05D008543 3.0e-12 75.9 62 59.7
MD17G1130900 Malus domestica HOM05D000189 ORTHO05D008543 3.0e-12 75.9 90 47.8
Peaxi162Scf01347g00140 Petunia axillaris HOM05D000189 ORTHO05D008543 3.0e-12 75.9 62 61.3
AL8G37490 Arabidopsis lyrata HOM05D000189 ORTHO05D008543 3.9e-12 75.5 62 61.3
AT5G60870 Arabidopsis thaliana HOM05D000189 ORTHO05D008543 3.9e-12 75.5 62 61.3
CAN.G275.2 Capsicum annuum HOM05D000189 ORTHO05D008543 3.9e-12 75.5 60 63.3
Ca_07428_v3 Cicer arietinum L. HOM05D000189 ORTHO05D008543 3.9e-12 75.5 76 53.9
DCAR_023873 Daucus carota HOM05D000189 ORTHO05D008543 3.9e-12 75.5 57 64.9
Thecc.01G175700 Theobroma cacao HOM05D000189 ORTHO05D008543 3.9e-12 75.5 62 58.1
Gohir.D08G060600 Gossypium hirsutum HOM05D000189 ORTHO05D008543 5.1e-12 75.1 57 64.9
Manes.02G091100 Manihot esculenta HOM05D000189 ORTHO05D008543 5.1e-12 75.1 57 64.9
PSO339G1220 Papaver somniferum HOM05D000189 ORTHO05D008543 5.1e-12 75.1 76 55.3
Gorai.004G062700 Gossypium raimondii HOM05D000189 ORTHO05D008543 6.7e-12 74.7 57 63.2
Lalb_Chr03g0040961 Lupinus albus HOM05D000189 ORTHO05D008543 6.7e-12 74.7 76 52.6
PSO384G2933 Papaver somniferum HOM05D000189 ORTHO05D008543 6.7e-12 74.7 76 55.3
THA.LOC104801043 Tarenaya hassleriana HOM05D000189 ORTHO05D008543 6.7e-12 74.7 78 53.8
COL.COLO4_19999 Corchorus olitorius HOM05D000189 ORTHO05D008543 8.7e-12 74.3 61 59.0
Hund04391 Selenicereus undatus HOM05D000189 ORTHO05D008543 8.7e-12 74.3 58 62.1
TAR626G0190 Trochodendron aralioides HOM05D000189 ORTHO05D008543 8.7e-12 74.3 74 60.8
BcaNung02612 Brassica carinata HOM05D000189 ORTHO05D008543 1.1e-11 73.9 62 59.7
A03p46560 Brassica napus HOM05D000189 ORTHO05D008543 1.1e-11 73.9 62 59.7
C07p44630 Brassica napus HOM05D000189 ORTHO05D008543 1.1e-11 73.9 62 59.7
BolC7t44986H Brassica oleracea HOM05D000189 ORTHO05D008543 1.1e-11 73.9 62 59.7
BraA03t13780Z Brassica rapa HOM05D000189 ORTHO05D008543 1.1e-11 73.9 62 59.7
CARHR274550 Cardamine hirsuta HOM05D000189 ORTHO05D008543 1.1e-11 73.9 62 59.7
MELO3C026358.2 Cucumis melo HOM05D000189 ORTHO05D008543 1.1e-11 73.9 60 60.0
Eucgr.K01353 Eucalyptus grandis HOM05D000189 ORTHO05D008543 1.1e-11 73.9 57 66.7
Thhalv10004213m.g Eutrema salsugineum HOM05D000189 ORTHO05D008543 1.1e-11 73.9 62 59.7
Glyma.08G342500 Glycine max HOM05D000189 ORTHO05D008543 1.1e-11 73.9 75 53.3
Sc07g0001900 Simmondsia chinensis HOM05D000189 ORTHO05D008543 1.1e-11 73.9 58 60.3
Sopen07g022550 Solanum pennellii HOM05D000189 ORTHO05D008543 1.1e-11 73.9 62 59.7
VMungo1127G2182 Vigna mungo HOM05D000189 ORTHO05D008543 1.1e-11 73.9 76 52.6
Carub.0008s2157 Capsella rubella HOM05D000189 ORTHO05D008543 1.5e-11 73.6 62 59.7
Lj1g0007746 Lotus japonicus HOM05D000189 ORTHO05D008543 1.5e-11 73.6 76 52.6
PGR044G2455 Punica granatum HOM05D000189 ORTHO05D008543 1.5e-11 73.6 76 53.9
Sed0021246 Sechium edule HOM05D000189 ORTHO05D008543 1.5e-11 73.6 74 55.4
Potri.004G000600 Populus trichocarpa HOM05D000189 ORTHO05D008543 1.9e-11 73.2 75 53.3
Sp2g24180 Schrenkiella parvula HOM05D000189 ORTHO05D008543 1.9e-11 73.2 57 64.9
Ah.03g147740 Amaranthus hybridus HOM05D000189 ORTHO05D008543 2.5e-11 72.8 62 56.5
CsaV3_4G032580 Cucumis sativus L. HOM05D000189 ORTHO05D008543 2.5e-11 72.8 60 58.3
Duzib138G0116 Durio zibethinus HOM05D000189 ORTHO05D008543 2.5e-11 72.8 62 58.1
Nn7g38375 Nelumbo nucifera HOM05D000189 ORTHO05D008543 2.5e-11 72.8 76 55.3
CANSAT64G0639 Cannabis sativa HOM05D000189 ORTHO05D008543 3.3e-11 72.4 62 56.5
HanXRQChr16g0519521 Helianthus annuus HOM05D000189 ORTHO05D008543 3.3e-11 72.4 56 64.3
Oeu027258.2 Olea europaea HOM05D000189 ORTHO05D008543 3.3e-11 72.4 57 64.9
AUR62017861 Chenopodium quinoa HOM05D000189 ORTHO05D008543 5.6e-11 71.6 62 53.2
BcaC06g33201 Brassica carinata HOM05D000189 ORTHO05D008543 9.6e-11 70.9 57 63.2
AUR62003547 Chenopodium quinoa HOM05D000189 ORTHO05D008543 9.6e-11 70.9 62 53.2
Aa31LG11G2420 Aethionema arabicum HOM05D000189 ORTHO05D008543 1.3e-10 70.5 62 58.1
Phvul.008G138200 Phaseolus vulgaris HOM05D000189 ORTHO05D008543 1.3e-10 70.5 76 50.0
Os09g0560450 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D008543 1.6e-10 70.1 61 59.0
Lsat_1_v5_gn_4_46020 Lactuca sativa HOM05D000189 ORTHO05D008543 2.8e-10 69.3 75 49.3
MBI02_g25820_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D008543 2.8e-10 69.3 56 64.3
Psat3g152720 Pisum sativum HOM05D000189 ORTHO05D008543 8.1e-10 67.8 76 50.0
SGA_v2.0_scaffold119G32752 Striga asiatica HOM05D000189 ORTHO05D008543 8.1e-10 67.8 80 51.2
TPR.G10187 Trifolium pratense HOM05D000189 ORTHO05D008543 8.1e-10 67.8 76 48.7
Medtr7g047560 Medicago truncatula HOM05D000189 ORTHO05D008543 1.1e-09 67.4 76 47.4
Medtr7g451760 Medicago truncatula HOM05D000189 ORTHO05D008543 1.1e-09 67.4 76 47.4
SalBow1G1916 Salvia bowleyana HOM05D000189 ORTHO05D008543 1.4e-09 67.0 62 53.2
SalBow3G2186 Salvia bowleyana HOM05D000189 ORTHO05D008543 1.4e-09 67.0 62 53.2
SEGI_12068 Sequoiadendron giganteum HOM05D000189 ORTHO05D008543 1.4e-09 67.0 61 54.1
Migut.H01259 Erythranthe guttata HOM05D000189 ORTHO05D008543 1.8e-09 66.6 62 56.5
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 2.4e-09 66.2 69 50.7
ATR0763G088 Amborella trichopoda HOM05D000189 ORTHO05D008543 2.6e-08 62.8 61 55.7
HPP92_005949 Vanilla planifolia HOM05D000189 ORTHO05D008543 4.5e-08 62.0 75 46.7
CDE02G0382 Ceratophyllum demersum HOM05D000189 ORTHO05D008543 9.9e-08 60.8 61 50.8
CDE05G1847 Ceratophyllum demersum HOM05D000189 ORTHO05D008543 1.7e-07 60.1 61 50.8
MBI02_g41579_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D008543 2.2e-07 59.7 58 60.3
Zm00001eb320310 Zea mays HOM05D000189 ORTHO05D008543 6.4e-07 58.2 48 62.5
SMO367G0649 Selaginella moellendorffii HOM05D000189 ORTHO05D008543 1.4e-06 57.0 74 47.3
vmacro09458 Vaccinium macrocarpon HOM05D000554 ORTHO05D050658 4.2e-06 55.5 29 86.2
Mapoly0026s0073 Marchantia polymorpha HOM05D000189 ORTHO05D008543 7.1e-06 54.7 73 45.2


User provided reference genes

Program Settings