Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09456 Vaccinium macrocarpon HOM05D000189 ORTHO05D008543 3.5e-76 288.1 138 100.0
vmacro19219 Vaccinium macrocarpon HOM05D000189 ORTHO05D008543 3.3e-58 228.4 163 71.2
Rhsim12G0189000 Rhododendron simsii HOM05D000189 ORTHO05D008543 6.1e-44 181.0 151 62.3
Actinidia35092 Actinidia chinensis HOM05D000189 ORTHO05D008543 4.8e-41 171.4 138 63.8
CSS0030038 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D008543 4.1e-40 168.3 140 60.0
CiPaw.03G108500 Carya illinoinensis HOM05D000189 ORTHO05D008543 5.4e-40 167.9 140 59.3
arahy.Tifrunner.gnm1.ann1.0TPK9J Arachis hypogaea HOM05D000189 ORTHO05D008543 7.0e-40 167.5 140 59.3
Cpa.g.sc332.5 Carica papaya HOM05D000189 ORTHO05D008543 9.1e-40 167.2 140 60.0
Ciclev10011722m.g Citrus clementina HOM05D000189 ORTHO05D008543 5.9e-39 164.5 140 60.0
Dinv10199 Davidia involucrata HOM05D000189 ORTHO05D008543 5.9e-39 164.5 145 58.6
Cfa023197 Carpinus fangiana HOM05D000189 ORTHO05D008543 1.0e-38 163.7 140 58.6
Sabra04G0000200 Salix brachista HOM05D000189 ORTHO05D008543 1.3e-38 163.3 140 58.6
GSVIVG01015901001 Vitis vinifera HOM05D000189 ORTHO05D008543 1.3e-38 163.3 140 60.0
Atru.chr8.1024 Acer truncatum HOM05D000189 ORTHO05D008543 2.2e-38 162.5 140 60.0
Atru.chr8.1034 Acer truncatum HOM05D000189 ORTHO05D008543 2.2e-38 162.5 140 60.0
Aqoxy1G01367 Aquilegia oxysepala HOM05D000189 ORTHO05D008543 2.2e-38 162.5 140 57.1
Gohir.A08G050800 Gossypium hirsutum HOM05D000189 ORTHO05D008543 2.2e-38 162.5 140 57.1
Gohir.D08G060600 Gossypium hirsutum HOM05D000189 ORTHO05D008543 2.2e-38 162.5 140 57.1
DCAR_023873 Daucus carota HOM05D000189 ORTHO05D008543 2.9e-38 162.2 139 57.6
Manes.02G091100 Manihot esculenta HOM05D000189 ORTHO05D008543 2.9e-38 162.2 140 59.3
Gorai.004G062700 Gossypium raimondii HOM05D000189 ORTHO05D008543 3.8e-38 161.8 140 56.4
QL04p063674 Quercus lobata HOM05D000004 ORTHO05D000002 5.0e-38 161.4 140 57.9
QL04p063839 Quercus lobata HOM05D000189 ORTHO05D008543 5.0e-38 161.4 140 57.9
Duzib138G0116 Durio zibethinus HOM05D000189 ORTHO05D008543 8.5e-38 160.6 140 57.1
Glyma.08G342500 Glycine max HOM05D000189 ORTHO05D008543 1.1e-37 160.2 140 57.1
Lalb_Chr03g0040961 Lupinus albus HOM05D000189 ORTHO05D008543 1.1e-37 160.2 140 56.4
Potri.004G000600 Populus trichocarpa HOM05D000189 ORTHO05D008543 1.1e-37 160.2 140 57.1
Lj1C845T8 Lonicera japonica HOM05D000189 ORTHO05D008543 2.5e-37 159.1 140 57.9
PSO339G1220 Papaver somniferum HOM05D000189 ORTHO05D008543 2.5e-37 159.1 140 57.9
RcHm_v2.0_Chr2g0153071 Rosa chinensis HOM05D000189 ORTHO05D008543 3.2e-37 158.7 140 57.1
TWI60G0179 Tripterygium wilfordii HOM05D000189 ORTHO05D008543 4.2e-37 158.3 140 57.9
TAR626G0190 Trochodendron aralioides HOM05D000189 ORTHO05D008543 4.2e-37 158.3 140 57.9
Ca_07428_v3 Cicer arietinum L. HOM05D000189 ORTHO05D008543 5.5e-37 157.9 140 57.1
Cc01_g04970 Coffea canephora HOM05D000189 ORTHO05D008543 5.5e-37 157.9 140 55.7
FAN05G5772 Fragaria x ananassa HOM05D000189 ORTHO05D008543 7.2e-37 157.5 140 56.4
FAN14G3158 Fragaria x ananassa HOM05D000189 ORTHO05D008543 7.2e-37 157.5 140 56.4
Lj1g0007746 Lotus japonicus HOM05D000189 ORTHO05D008543 7.2e-37 157.5 145 55.9
PSO384G2933 Papaver somniferum HOM05D000189 ORTHO05D008543 7.2e-37 157.5 140 57.9
MD09G1144200 Malus domestica HOM05D000189 ORTHO05D008543 9.4e-37 157.1 140 57.1
COL.COLO4_19999 Corchorus olitorius HOM05D000189 ORTHO05D008543 1.2e-36 156.8 140 55.0
VMungo1127G2182 Vigna mungo HOM05D000189 ORTHO05D008543 1.2e-36 156.8 140 56.4
Eucgr.K01353 Eucalyptus grandis HOM05D000189 ORTHO05D008543 1.6e-36 156.4 140 55.7
Hund04391 Selenicereus undatus HOM05D000189 ORTHO05D008543 1.6e-36 156.4 140 55.7
AL8G37490 Arabidopsis lyrata HOM05D000189 ORTHO05D008543 2.1e-36 156.0 140 57.1
FvH4_6g39230 Fragaria vesca HOM05D000189 ORTHO05D008543 2.1e-36 156.0 140 56.4
CANSAT64G0639 Cannabis sativa HOM05D000189 ORTHO05D008543 2.7e-36 155.6 140 57.1
BcaC06g33201 Brassica carinata HOM05D000189 ORTHO05D008543 3.6e-36 155.2 140 55.7
CARHR274550 Cardamine hirsuta HOM05D000189 ORTHO05D008543 4.7e-36 154.8 140 55.0
Peaxi162Scf01347g00140 Petunia axillaris HOM05D000189 ORTHO05D008543 4.7e-36 154.8 140 57.1
AT5G60870 Arabidopsis thaliana HOM05D000189 ORTHO05D008543 6.1e-36 154.5 140 55.7
Migut.H01259 Erythranthe guttata HOM05D000189 ORTHO05D008543 6.1e-36 154.5 140 54.3
Thhalv10004213m.g Eutrema salsugineum HOM05D000189 ORTHO05D008543 6.1e-36 154.5 140 56.4
Sp2g24180 Schrenkiella parvula HOM05D000189 ORTHO05D008543 6.1e-36 154.5 140 56.4
BcaNung02612 Brassica carinata HOM05D000189 ORTHO05D008543 1.0e-35 153.7 140 55.0
A03p46560 Brassica napus HOM05D000189 ORTHO05D008543 1.0e-35 153.7 140 55.0
C07p44630 Brassica napus HOM05D000189 ORTHO05D008543 1.0e-35 153.7 140 55.0
BolC7t44986H Brassica oleracea HOM05D000189 ORTHO05D008543 1.0e-35 153.7 140 55.0
BraA03t13780Z Brassica rapa HOM05D000189 ORTHO05D008543 1.0e-35 153.7 140 55.0
FAN02G3098 Fragaria x ananassa HOM05D000189 ORTHO05D008543 1.0e-35 153.7 140 55.7
Nn7g38375 Nelumbo nucifera HOM05D000189 ORTHO05D008543 1.0e-35 153.7 140 56.4
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 1.4e-35 153.3 140 54.3
SGA_v2.0_scaffold119G32752 Striga asiatica HOM05D000189 ORTHO05D008543 1.4e-35 153.3 140 52.9
MELO3C026358.2 Cucumis melo HOM05D000189 ORTHO05D008543 1.8e-35 152.9 140 53.6
Medtr7g047560 Medicago truncatula HOM05D000189 ORTHO05D008543 2.3e-35 152.5 140 54.3
Medtr7g451760 Medicago truncatula HOM05D000189 ORTHO05D008543 2.3e-35 152.5 140 54.3
HanXRQChr16g0519521 Helianthus annuus HOM05D000189 ORTHO05D008543 3.0e-35 152.1 140 54.3
PGR044G2455 Punica granatum HOM05D000189 ORTHO05D008543 3.0e-35 152.1 140 55.7
CsaV3_4G032580 Cucumis sativus L. HOM05D000189 ORTHO05D008543 5.2e-35 151.4 140 52.9
TPR.G10187 Trifolium pratense HOM05D000189 ORTHO05D008543 5.2e-35 151.4 140 55.0
Phvul.008G138200 Phaseolus vulgaris HOM05D000189 ORTHO05D008543 6.8e-35 151.0 140 55.0
Psat3g152720 Pisum sativum HOM05D000189 ORTHO05D008543 6.8e-35 151.0 140 55.7
Aa31LG11G2420 Aethionema arabicum HOM05D000189 ORTHO05D008543 1.2e-34 150.2 139 55.4
CAN.G275.2 Capsicum annuum HOM05D000189 ORTHO05D008543 1.2e-34 150.2 140 55.0
Sc07g0001900 Simmondsia chinensis HOM05D000189 ORTHO05D008543 1.2e-34 150.2 141 52.5
Sopen07g022550 Solanum pennellii HOM05D000189 ORTHO05D008543 1.2e-34 150.2 140 55.0
Carub.0008s2157 Capsella rubella HOM05D000189 ORTHO05D008543 1.5e-34 149.8 140 54.3
Lsat_1_v5_gn_4_46020 Lactuca sativa HOM05D000189 ORTHO05D008543 3.4e-34 148.7 140 52.9
Sed0021246 Sechium edule HOM05D000189 ORTHO05D008543 4.4e-34 148.3 140 53.6
THA.LOC104801043 Tarenaya hassleriana HOM05D000189 ORTHO05D008543 4.4e-34 148.3 140 52.9
MBI02_g41579_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D008543 8.3e-33 144.1 142 53.5
AUR62017861 Chenopodium quinoa HOM05D000189 ORTHO05D008543 1.1e-32 143.7 140 50.0
AUR62003547 Chenopodium quinoa HOM05D000189 ORTHO05D008543 2.4e-32 142.5 140 49.3
vmacro20928 Vaccinium macrocarpon HOM05D000189 ORTHO05D008543 2.7e-31 139.0 199 44.7
HPP92_005949 Vanilla planifolia HOM05D000189 ORTHO05D008543 2.7e-31 139.0 140 50.7
ATR0763G088 Amborella trichopoda HOM05D000189 ORTHO05D008543 3.5e-31 138.7 140 51.4
EL10Ac6g15331 Beta vulgaris HOM05D000189 ORTHO05D008543 5.9e-31 137.9 179 41.3
CDE02G0382 Ceratophyllum demersum HOM05D000189 ORTHO05D008543 1.9e-29 132.9 140 47.9
Os09g0560450 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D008543 1.2e-28 130.2 140 47.1
vmacro09460 Vaccinium macrocarpon HOM05D000189 ORTHO05D008543 2.8e-28 129.0 86 77.9
Nitab4.5_0000807g0180 Nicotiana tabacum HOM05D000189 ORTHO05D008543 1.3e-25 120.2 113 53.1
Nitab4.5_0000170g0240 Nicotiana tabacum HOM05D000189 ORTHO05D008543 1.7e-25 119.8 113 52.2
Mapoly0026s0073 Marchantia polymorpha HOM05D000189 ORTHO05D008543 2.2e-25 119.4 140 45.7
Haze_13663 Corylus avellana HOM05D000189 ORTHO05D008543 2.9e-25 119.0 112 53.6
MBI02_g25820_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D008543 4.9e-25 118.2 130 50.0
Zm00001eb320310 Zea mays HOM05D000189 ORTHO05D008543 4.9e-25 118.2 132 47.0
SalBow1G1916 Salvia bowleyana HOM05D000189 ORTHO05D008543 2.0e-23 112.8 113 47.8
SalBow3G2186 Salvia bowleyana HOM05D000189 ORTHO05D008543 2.0e-23 112.8 113 47.8
Thecc.01G175700 Theobroma cacao HOM05D000189 ORTHO05D008543 2.0e-23 112.8 113 49.6
CDE05G1847 Ceratophyllum demersum HOM05D000189 ORTHO05D008543 2.9e-22 109.0 122 47.5
SMO367G0649 Selaginella moellendorffii HOM05D000189 ORTHO05D008543 6.6e-22 107.8 140 42.1
MD17G1130900 Malus domestica HOM05D000189 ORTHO05D008543 2.8e-20 102.4 124 46.8
Pp3c10_6070 Physcomitrium patens HOM05D000189 ORTHO05D008543 2.8e-20 102.4 139 38.1
Oeu027258.2 Olea europaea HOM05D000189 ORTHO05D008543 1.0e-19 100.5 170 36.5
Ah.03g147740 Amaranthus hybridus HOM05D000189 ORTHO05D008543 3.1e-19 99.0 113 44.2
Actinidia18928 Actinidia chinensis HOM05D000189 ORTHO05D008543 5.2e-19 98.2 77 58.4
SMO367G1204 Selaginella moellendorffii HOM05D000189 ORTHO05D008543 3.4e-18 95.5 142 40.8
Prupe.3G183700 Prunus persica HOM05D000189 ORTHO05D008543 2.2e-17 92.8 129 43.4
AagrBONN_evm.TU.Sc2ySwM_228.3291 Anthoceros agrestis HOM05D000189 ORTHO05D008543 6.2e-12 74.7 101 43.6
SEGI_12068 Sequoiadendron giganteum HOM05D000189 ORTHO05D008543 1.5e-10 70.1 73 50.7
SMO275G0060 Selaginella moellendorffii HOM05D000189 ORTHO05D008543 4.9e-09 65.1 112 35.7
Lsat_1_v5_gn_5_19381 Lactuca sativa HOM05D000189 ORTHO05D000474 2.3e-06 56.2 142 27.5


User provided reference genes

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