Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 8.0e-112 407.1 212 100.0
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 3.2e-76 288.9 169 81.1
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 4.2e-60 235.3 212 59.4
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 1.6e-59 233.4 215 59.1
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 4.8e-48 195.3 214 50.9
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 2.9e-45 186.0 164 61.0
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 3.2e-44 182.6 212 50.9
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 4.7e-43 178.7 167 56.9
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 1.3e-40 170.6 160 53.8
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 1.3e-40 170.6 164 53.0
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 4.8e-40 168.7 161 54.0
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 8.2e-40 167.9 163 54.6
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 1.1e-39 167.5 161 53.4
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 4.1e-39 165.6 219 47.9
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 2.0e-38 163.3 215 46.0
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 2.6e-38 162.9 167 49.7
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 3.5e-38 162.5 168 53.0
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 5.9e-38 161.8 170 51.8
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 1.0e-37 161.0 165 54.5
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 1.0e-37 161.0 214 48.6
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.0e-37 161.0 170 50.0
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 1.3e-37 160.6 159 57.2
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 2.9e-37 159.5 170 49.4
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 5.0e-37 158.7 217 46.1
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 8.5e-37 157.9 212 44.3
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 8.5e-37 157.9 162 55.6
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 1.5e-36 157.1 173 53.2
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 1.9e-36 156.8 165 50.9
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 1.9e-36 156.8 165 50.9
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 1.9e-36 156.8 160 55.0
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 9.4e-36 154.5 217 45.2
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 9.4e-36 154.5 168 50.0
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 9.4e-36 154.5 161 52.2
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 1.6e-35 153.7 177 50.3
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 1.6e-35 153.7 169 48.5
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 2.7e-35 152.9 168 49.4
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 3.6e-35 152.5 218 46.8
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 3.6e-35 152.5 218 46.8
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 3.6e-35 152.5 161 51.6
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 8.0e-35 151.4 217 45.2
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 1.0e-34 151.0 154 51.3
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 3.0e-34 149.4 161 47.2
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 7.5e-33 144.8 219 41.1
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 6.3e-32 141.7 174 47.1
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 1.8e-31 140.2 168 45.2
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 2.4e-31 139.8 216 41.2
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 3.1e-31 139.4 139 55.4
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 4.1e-31 139.0 158 49.4
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 1.2e-30 137.5 237 38.8
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 2.0e-30 136.7 144 54.2
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 4.5e-30 135.6 217 42.4
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 2.2e-29 133.3 183 42.6
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 2.2e-29 133.3 169 45.6
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 8.5e-29 131.3 164 45.7
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 1.9e-28 130.2 231 37.7
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.9e-28 130.2 162 45.7
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 2.5e-28 129.8 157 50.3
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 3.2e-28 129.4 158 48.7
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 3.2e-28 129.4 160 46.9
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 4.2e-28 129.0 166 48.2
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 5.5e-28 128.6 160 48.8
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 5.5e-28 128.6 162 45.7
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 7.2e-28 128.3 230 38.7
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 7.2e-28 128.3 229 38.9
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 7.2e-28 128.3 233 38.6
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 7.2e-28 128.3 159 45.9
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 9.4e-28 127.9 159 46.5
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 1.2e-27 127.5 160 46.2
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 2.1e-27 126.7 159 45.9
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 4.7e-27 125.6 159 47.2
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 4.7e-27 125.6 159 46.5
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 8.0e-27 124.8 161 45.3
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 8.8e-26 121.3 155 45.8
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 3.4e-25 119.4 158 43.0
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 4.4e-25 119.0 160 46.2
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 2.2e-24 116.7 160 45.6
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 2.2e-24 116.7 160 45.6
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 2.2e-24 116.7 160 45.6
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 3.7e-24 115.9 163 41.7
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 4.1e-23 112.5 240 35.4
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 1.6e-22 110.5 168 42.3
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 7.7e-22 108.2 156 44.2
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 2.2e-21 106.7 155 42.6
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 1.1e-20 104.4 155 41.3
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 3.2e-20 102.8 244 35.2
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 7.2e-20 101.7 166 40.4
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 9.4e-20 101.3 234 38.5
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 6.1e-19 98.6 242 33.5
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 1.4e-18 97.4 149 43.0
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 2.8e-16 89.7 158 36.7
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 1.2e-14 84.3 91 50.5
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 2.0e-14 83.6 157 37.6
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 1.0e-13 81.3 125 44.0
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 6.6e-13 78.6 101 45.5
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 5.7e-09 65.5 41 65.9
Os02g0320600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 9.8e-09 64.7 37 73.0
Os02g0321600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 1.3e-08 64.3 91 42.9
SEGI_41065 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 3.7e-08 62.8 150 34.0
Zm00001eb100670 Zea mays HOM05D007501 ORTHO05D009528 3.7e-08 62.8 67 47.8
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 6.4e-08 62.0 31 77.4
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 1.8e-07 60.5 78 44.9
SEGI_16996 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 9.2e-07 58.2 151 32.5
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.7e-06 56.6 36 63.9
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 4.6e-06 55.8 36 63.9
SMO367G0928 Selaginella moellendorffii HOM05D002803 ORTHO05D003089 4.6e-06 55.8 123 33.3
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 5.9e-06 55.5 77 39.0


User provided reference genes

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