Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09385 Vaccinium macrocarpon HOM05D061193 ORTHO05D026095 2.3e-170 602.1 291 100.0
vmacro20040 Vaccinium macrocarpon HOM05D061193 ORTHO05D026095 1.1e-50 204.5 183 65.0
vmacro09384 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.4e-29 134.4 345 30.4
Rhsim04G0041100 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.8e-16 90.9 382 24.9
vmacro09383 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 2.5e-15 87.0 395 25.1
vmacro12514 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 2.5e-15 87.0 394 25.1
Rhsim04G0042800 Rhododendron simsii HOM05D019309 ORTHO05D026095 1.1e-13 81.6 227 29.1
Actinidia36533 Actinidia chinensis HOM05D000007 ORTHO05D000521 3.1e-13 80.1 297 26.9
CSS0009149 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 5.8e-12 75.9 375 24.5
Rhsim04G0041300 Rhododendron simsii HOM05D000007 ORTHO05D000521 5.8e-12 75.9 291 27.1
Rhsim04G0040800 Rhododendron simsii HOM05D000007 ORTHO05D000521 7.6e-12 75.5 159 34.0
Actinidia12094 Actinidia chinensis HOM05D000007 ORTHO05D000521 4.2e-10 69.7 303 25.1
Nitab4.5_0000259g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000521 2.1e-09 67.4 230 27.4
QL03p035744 Quercus lobata HOM05D000007 ORTHO05D000521 2.1e-09 67.4 307 23.5
Duzib106G0789 Durio zibethinus HOM05D000007 ORTHO05D000521 2.7e-09 67.0 83 48.2
Nn1g00748 Nelumbo nucifera HOM05D000007 ORTHO05D000017 2.7e-09 67.0 142 29.6
COL.COLO4_20655 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.5e-09 66.6 266 24.1
Cfa014274 Carpinus fangiana HOM05D000007 ORTHO05D000521 4.6e-09 66.2 208 29.3
Thecc.04G272200 Theobroma cacao HOM05D000007 ORTHO05D000521 6.0e-09 65.9 107 33.6
Cfa014273 Carpinus fangiana HOM05D000007 ORTHO05D000521 7.9e-09 65.5 96 34.4
Atru.chr6.3331 Acer truncatum HOM05D000007 ORTHO05D000521 1.0e-08 65.1 351 23.6
Lj8A117T66 Lonicera japonica HOM05D000007 ORTHO05D000521 1.3e-08 64.7 332 23.2
COL.COLO4_13971 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.8e-08 64.3 108 33.3
PGSC0003DMG400044791 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.8e-08 64.3 107 36.4
MSTRG.27886 Avicennia marina HOM05D000007 ORTHO05D000521 3.0e-08 63.5 51 54.9
COL.COLO4_06940 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.0e-08 63.5 258 26.7
HanXRQChr10g0295591 Helianthus annuus HOM05D000007 ORTHO05D000521 3.0e-08 63.5 73 38.4
CSS0029161 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 3.9e-08 63.2 159 28.9
Gohir.A09G060800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 3.9e-08 63.2 107 31.8
CSS0029460 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 5.1e-08 62.8 326 21.8
TAR626G0901 Trochodendron aralioides HOM05D000007 ORTHO05D000017 5.1e-08 62.8 106 32.1
Dinv05848 Davidia involucrata HOM05D000007 ORTHO05D000521 8.7e-08 62.0 100 37.0
QL06p035449 Quercus lobata HOM05D000007 ORTHO05D000521 8.7e-08 62.0 110 32.7
Rhsim04G0156200 Rhododendron simsii HOM05D000007 ORTHO05D000039 8.7e-08 62.0 210 27.6
RcHm_v2.0_Chr6g0309591 Rosa chinensis HOM05D000007 ORTHO05D000521 8.7e-08 62.0 109 34.9
SGA_v2.0_scaffold146G36245 Striga asiatica HOM05D000007 ORTHO05D000521 8.7e-08 62.0 109 29.4
CSS0040081 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 1.1e-07 61.6 159 28.3
QL08p029334 Quercus lobata HOM05D000007 ORTHO05D000521 1.1e-07 61.6 252 23.4
PGSC0003DMG400040264 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.5e-07 61.2 107 35.5
Dinv26435 Davidia involucrata HOM05D000007 ORTHO05D000521 1.9e-07 60.8 105 33.3
Gohir.D09G059800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 1.9e-07 60.8 107 30.8
Gorai.006G074400 Gossypium raimondii HOM05D000007 ORTHO05D000521 1.9e-07 60.8 107 30.8
Lsat_1_v5_gn_9_103981 Lactuca sativa HOM05D000007 ORTHO05D000521 1.9e-07 60.8 110 36.4
PSO566G0091 Papaver somniferum HOM05D000007 ORTHO05D000676 1.9e-07 60.8 95 38.9
Potri.011G037200 Populus trichocarpa HOM05D000007 ORTHO05D000521 1.9e-07 60.8 360 23.3
Rhsim04G0042700 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.9e-07 60.8 55 56.4
Rhsim04G0042000 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.5e-07 60.5 70 47.1
CSS0006709 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 3.3e-07 60.1 159 28.3
DCAR_016395 Daucus carota HOM05D000007 ORTHO05D000521 3.3e-07 60.1 58 39.7
DCAR_016396 Daucus carota HOM05D000007 ORTHO05D000521 3.3e-07 60.1 58 39.7
DCAR_016397 Daucus carota HOM05D000007 ORTHO05D000521 3.3e-07 60.1 58 39.7
DCAR_016398 Daucus carota HOM05D000007 ORTHO05D000521 3.3e-07 60.1 58 39.7
Potri.011G037312 Populus trichocarpa HOM05D000007 ORTHO05D000521 3.3e-07 60.1 360 23.3
Dinv29686 Davidia involucrata HOM05D000007 ORTHO05D000521 4.3e-07 59.7 75 44.0
Lj8A0T14 Lonicera japonica HOM05D000007 ORTHO05D000521 4.3e-07 59.7 56 53.6
PGSC0003DMG400037423 Solanum tuberosum HOM05D000007 ORTHO05D000521 4.3e-07 59.7 107 34.6
Rhsim04G0042200 Rhododendron simsii HOM05D000007 ORTHO05D000521 5.7e-07 59.3 51 56.9
SalBow1G1805 Salvia bowleyana HOM05D000007 ORTHO05D000521 5.7e-07 59.3 79 36.7
SalBow1G7853 Salvia bowleyana HOM05D000007 ORTHO05D000521 5.7e-07 59.3 79 36.7
Cpa.g.sc483.2 Carica papaya HOM05D000007 ORTHO05D000521 7.4e-07 58.9 95 34.7
Ciclev10011634m.g Citrus clementina HOM05D000007 ORTHO05D000521 7.4e-07 58.9 109 33.9
ECA240G0628 Erigeron canadensis HOM05D000007 ORTHO05D000521 7.4e-07 58.9 61 42.6
Prupe.1G167600 Prunus persica HOM05D000007 ORTHO05D000017 7.4e-07 58.9 92 37.0
vmacro23030 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 7.4e-07 58.9 119 31.9
CiPaw.13G053300 Carya illinoinensis HOM05D000007 ORTHO05D000521 9.6e-07 58.5 84 38.1
Lj4g0010166 Lotus japonicus HOM05D000007 ORTHO05D000521 9.6e-07 58.5 55 49.1
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 9.6e-07 58.5 108 33.3
Rhsim04G0040700 Rhododendron simsii HOM05D000007 ORTHO05D000521 9.6e-07 58.5 57 52.6
DCAR_006302 Daucus carota HOM05D000007 ORTHO05D000521 1.3e-06 58.2 106 36.8
DCAR_021098 Daucus carota HOM05D000007 ORTHO05D000521 1.3e-06 58.2 105 35.2
Dinv01180 Davidia involucrata HOM05D000007 ORTHO05D000521 1.3e-06 58.2 121 31.4
Lj8A4T15 Lonicera japonica HOM05D000007 ORTHO05D000521 1.3e-06 58.2 106 33.0
MBI05_g26511_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000676 1.3e-06 58.2 87 41.4
vmacro01618 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.3e-06 58.2 111 33.3
vmacro23187 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.3e-06 58.2 76 42.1
Lsat_1_v5_gn_9_104260 Lactuca sativa HOM05D000007 ORTHO05D000521 1.6e-06 57.8 56 46.4
Medtr5g010610 Medicago truncatula HOM05D000007 ORTHO05D000521 1.6e-06 57.8 102 29.4
Peaxi162Scf00376g00061 Petunia axillaris HOM05D000007 ORTHO05D000521 1.6e-06 57.8 71 47.9
CSS0008382 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 2.1e-06 57.4 96 31.2
DCAR_017832 Daucus carota HOM05D000007 ORTHO05D000521 2.1e-06 57.4 107 35.5
Migut.C01223 Erythranthe guttata HOM05D000007 ORTHO05D000521 2.1e-06 57.4 128 32.0
QL10p051041 Quercus lobata HOM05D000007 ORTHO05D000521 2.1e-06 57.4 79 38.0
Rhsim04G0039900 Rhododendron simsii HOM05D000285 ORTHO05D000521 2.1e-06 57.4 247 25.9
Rhsim04G0041900 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.1e-06 57.4 72 43.1
Rhsim06G0172500 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.1e-06 57.4 45 57.8
DCAR_016401 Daucus carota HOM05D000007 ORTHO05D000521 2.8e-06 57.0 109 34.9
Hma1.2p1_0157F.1_g069160 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 2.8e-06 57.0 57 43.9
Hma1.2p1_0157F.1_g069186 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 2.8e-06 57.0 57 43.9
Lj8C11T0 Lonicera japonica HOM05D000007 ORTHO05D000521 2.8e-06 57.0 115 32.2
Nitab4.5_0003037g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000521 2.8e-06 57.0 108 31.5
PSO782G4364 Papaver somniferum HOM05D000007 ORTHO05D000017 2.8e-06 57.0 104 29.8
Cc02_g23650 Coffea canephora HOM05D000007 ORTHO05D000521 3.7e-06 56.6 53 50.9
HanXRQChr00c0237g0572781 Helianthus annuus HOM05D000007 ORTHO05D000521 3.7e-06 56.6 58 53.4
HanXRQChr11g0327481 Helianthus annuus HOM05D000007 ORTHO05D000676 3.7e-06 56.6 58 53.4
Medtr5g010560 Medicago truncatula HOM05D000007 ORTHO05D000521 3.7e-06 56.6 103 29.1
PSO675G3468 Papaver somniferum HOM05D000007 ORTHO05D000017 3.7e-06 56.6 107 31.8
Potri.001G224200 Populus trichocarpa HOM05D000007 ORTHO05D000521 3.7e-06 56.6 171 29.2
Rhsim04G0043400 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.7e-06 56.6 28 85.7
Actinidia10779 Actinidia chinensis HOM05D000007 ORTHO05D000521 4.8e-06 56.2 72 40.3
COL.COLO4_13967 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.8e-06 56.2 72 34.7
PSO478G3417 Papaver somniferum HOM05D004049 ORTHO05D004496 4.8e-06 56.2 58 43.1
TAR383G0723 Trochodendron aralioides HOM05D000007 ORTHO05D000521 4.8e-06 56.2 239 24.3
HanXRQChr03g0074881 Helianthus annuus HOM05D000007 ORTHO05D000521 6.2e-06 55.8 59 45.8
Lsat_1_v5_gn_9_104300 Lactuca sativa HOM05D000007 ORTHO05D000521 6.2e-06 55.8 60 43.3
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 6.2e-06 55.8 49 51.0
Rhsim04G0040600 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.2e-06 55.8 55 50.9
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.2e-06 55.8 133 30.1
CSS0009515 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 8.2e-06 55.5 120 30.0
COL.COLO4_23193 Corchorus olitorius HOM05D000007 ORTHO05D000521 8.2e-06 55.5 71 38.0
Haze_03323 Corylus avellana HOM05D000007 ORTHO05D000521 8.2e-06 55.5 65 40.0
Lsat_1_v5_gn_1_128641 Lactuca sativa HOM05D000007 ORTHO05D000521 8.2e-06 55.5 111 31.5
Peaxi162Scf00268g00143 Petunia axillaris HOM05D000007 ORTHO05D000521 8.2e-06 55.5 133 31.6
Peaxi162Scf00376g00064 Petunia axillaris HOM05D000007 ORTHO05D000521 8.2e-06 55.5 71 47.9
Potri.001G129200 Populus trichocarpa HOM05D000007 ORTHO05D000521 8.2e-06 55.5 79 38.0
Potri.008G215800 Populus trichocarpa HOM05D000007 ORTHO05D000521 8.2e-06 55.5 93 35.5
Potri.008G216000 Populus trichocarpa HOM05D000007 ORTHO05D000521 8.2e-06 55.5 93 35.5
QL04p028890 Quercus lobata HOM05D000007 ORTHO05D000521 8.2e-06 55.5 75 37.3
QL10p051031 Quercus lobata HOM05D000007 ORTHO05D000521 8.2e-06 55.5 76 38.2


User provided reference genes

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