Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 2.5e-120 436.4 215 100.0
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 2.5e-80 303.5 214 72.9
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 1.1e-72 278.1 217 67.3
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 1.1e-72 278.1 217 67.3
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 2.5e-64 250.4 215 63.3
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 5.4e-51 206.1 221 54.3
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 6.4e-44 182.6 219 47.5
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.7e-36 157.9 170 54.7
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 6.0e-34 149.4 120 62.5
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 1.8e-33 147.9 148 56.1
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 6.7e-33 146.0 148 56.1
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 2.5e-32 144.1 147 56.5
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 3.3e-32 143.7 215 42.8
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 1.6e-31 141.4 147 53.1
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 4.8e-31 139.8 144 54.9
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 8.1e-31 139.0 143 55.2
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 7.6e-29 132.5 146 51.4
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 6.4e-28 129.4 160 50.6
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.8e-25 121.3 141 49.6
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 2.3e-25 120.9 117 52.1
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 5.1e-25 119.8 153 49.0
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 5.1e-25 119.8 145 48.3
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 1.5e-24 118.2 111 54.1
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.5e-24 118.2 121 50.4
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 1.5e-24 118.2 121 51.2
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.9e-24 117.9 121 50.4
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.9e-24 117.9 141 48.9
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.9e-24 117.9 154 44.8
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 3.3e-24 117.1 157 44.6
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 9.6e-24 115.5 163 44.2
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 2.8e-23 114.0 155 42.6
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 1.1e-22 112.1 153 44.4
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 1.8e-22 111.3 140 46.4
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 3.1e-22 110.5 132 45.5
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 3.1e-22 110.5 140 47.1
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 1.2e-21 108.6 123 48.0
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 4.5e-21 106.7 140 46.4
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 5.8e-21 106.3 127 44.9
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 5.8e-21 106.3 140 45.7
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 7.6e-21 105.9 152 42.1
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.0e-20 105.5 140 45.7
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 1.7e-20 104.8 115 46.1
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 2.2e-20 104.4 114 47.4
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 5.5e-19 99.8 114 45.6
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 9.3e-19 99.0 124 43.5
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 2.7e-18 97.4 142 40.1
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 2.7e-18 97.4 129 41.9
Sopen07g028580 Solanum pennellii HOM05D007281 ORTHO05D009241 3.5e-18 97.1 126 46.8
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 4.6e-18 96.7 130 46.2
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 7.9e-18 95.9 161 38.5
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 7.9e-18 95.9 97 47.4
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 1.0e-17 95.5 113 47.8
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 5.1e-17 93.2 115 43.5
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 3.3e-16 90.5 129 38.0
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 5.7e-16 89.7 113 39.8
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 5.7e-16 89.7 114 41.2
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 7.4e-16 89.4 116 43.1
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 9.7e-16 89.0 114 39.5
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 9.7e-16 89.0 114 41.2
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 1.6e-15 88.2 79 60.8
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 6.3e-15 86.3 112 43.8
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 1.8e-14 84.7 114 41.2
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 2.4e-14 84.3 122 43.4
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 3.1e-14 84.0 115 40.9
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 5.3e-14 83.2 119 38.7
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 1.5e-13 81.6 122 40.2
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 2.6e-13 80.9 112 42.0
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 2.6e-13 80.9 104 41.3
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 5.9e-13 79.7 99 47.5
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 1.1e-11 75.5 111 37.8
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 1.9e-11 74.7 78 52.6
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 1.9e-11 74.7 117 36.8
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 3.2e-11 73.9 114 35.1
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 9.4e-11 72.4 108 41.7
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 2.1e-10 71.2 102 41.2
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 3.6e-10 70.5 80 48.8
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 1.4e-09 68.6 81 46.9
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 1.8e-09 68.2 109 40.4
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 5.1e-09 66.6 81 46.9
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 5.1e-09 66.6 81 46.9
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 1.1e-08 65.5 81 46.9
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 1.1e-08 65.5 76 48.7
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 1.5e-08 65.1 144 34.0
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 2.5e-08 64.3 80 46.2
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 4.3e-08 63.5 79 46.8
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 7.4e-08 62.8 137 30.7
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 2.8e-07 60.8 78 42.3
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 4.8e-07 60.1 74 40.5
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 4.8e-07 60.1 100 38.0
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 4.8e-07 60.1 100 38.0
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 4.8e-07 60.1 100 38.0
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 4.8e-07 60.1 110 35.5
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 1.4e-06 58.5 111 36.9
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 3.1e-06 57.4 66 45.5
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 3.1e-06 57.4 66 45.5
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 6.9e-06 56.2 91 37.4


User provided reference genes

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