Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09249 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 1.2e-50 203.0 110 100.0
Actinidia39326 Actinidia chinensis HOM05D002385 ORTHO05D002245 2.1e-18 95.9 78 70.5
Actinidia11006 Actinidia chinensis HOM05D002385 ORTHO05D002245 5.1e-17 91.3 81 67.9
Actinidia30458 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.9e-16 89.4 78 66.7
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 5.6e-16 87.8 80 67.5
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 9.6e-16 87.0 80 67.5
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 9.6e-16 87.0 80 65.0
Actinidia11099 Actinidia chinensis HOM05D002385 ORTHO05D002245 2.1e-15 85.9 76 59.2
Eucgr.A00899 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.1e-14 83.6 79 65.8
Sabra16G0021200 Salix brachista HOM05D002385 ORTHO05D002245 1.4e-14 83.2 77 67.5
Sabra16G0025900 Salix brachista HOM05D002385 ORTHO05D002245 1.4e-14 83.2 77 67.5
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 1.8e-14 82.8 80 67.5
Potri.006G021600 Populus trichocarpa HOM05D002385 ORTHO05D002245 5.2e-14 81.3 75 58.7
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 5.2e-14 81.3 77 62.3
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.2e-13 80.1 87 59.8
COL.COLO4_07164 Corchorus olitorius HOM05D002385 ORTHO05D002245 2.6e-13 79.0 80 65.0
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 4.4e-13 78.2 83 60.2
Eucgr.A00898 Eucalyptus grandis HOM05D002385 ORTHO05D002245 4.4e-13 78.2 79 62.0
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 4.4e-13 78.2 80 63.8
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 5.8e-13 77.8 79 63.3
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 7.6e-13 77.4 83 62.7
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 7.6e-13 77.4 83 62.7
Actinidia11007 Actinidia chinensis HOM05D002385 ORTHO05D002245 7.6e-13 77.4 75 64.0
CSS0045060 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 2.2e-12 75.9 81 64.2
Medtr4g091090 Medicago truncatula HOM05D002385 ORTHO05D002245 2.2e-12 75.9 82 58.5
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 2.2e-12 75.9 70 65.7
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 2.2e-12 75.9 70 65.7
HanXRQChr11g0335361 Helianthus annuus HOM05D002385 ORTHO05D002245 4.9e-12 74.7 78 60.3
Actinidia11100 Actinidia chinensis HOM05D003155 ORTHO05D002245 6.4e-12 74.3 70 67.1
Manes.09G073500 Manihot esculenta HOM05D002385 ORTHO05D002245 6.4e-12 74.3 75 58.7
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 8.4e-12 73.9 68 66.2
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 8.4e-12 73.9 78 57.7
Duzib138G1429 Durio zibethinus HOM05D002385 ORTHO05D002245 1.1e-11 73.6 80 57.5
CSS0047514 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 1.4e-11 73.2 80 63.8
Dinv18438 Davidia involucrata HOM05D002385 ORTHO05D002245 1.4e-11 73.2 90 57.8
MELO3C026402.2 Cucumis melo HOM05D002385 ORTHO05D002245 2.4e-11 72.4 69 66.7
Eucgr.A00896 Eucalyptus grandis HOM05D002385 ORTHO05D002245 3.2e-11 72.0 79 60.8
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 5.4e-11 71.2 81 60.5
ClCG11G016780 Citrullus lanatus HOM05D002385 ORTHO05D002245 7.1e-11 70.9 77 59.7
Medtr2g069420 Medicago truncatula HOM05D002385 ORTHO05D002245 9.3e-11 70.5 75 61.3
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.6e-10 69.7 82 52.4
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.6e-10 69.7 82 52.4
Psat1g011360 Pisum sativum HOM05D002385 ORTHO05D002245 1.6e-10 69.7 74 58.1
GSVIVG01015788001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.6e-10 69.7 79 55.7
Sed0001434 Sechium edule HOM05D002385 ORTHO05D002245 2.1e-10 69.3 77 58.4
CsaV3_4G032300 Cucumis sativus L. HOM05D002385 ORTHO05D002245 2.7e-10 68.9 68 64.7
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.7e-10 68.9 80 58.8
Peaxi162Scf00322g00010 Petunia axillaris HOM05D002385 ORTHO05D002245 3.5e-10 68.6 79 58.2
QL04p061407 Quercus lobata HOM05D002385 ORTHO05D002245 3.5e-10 68.6 75 57.3
Eucgr.A00900 Eucalyptus grandis HOM05D002385 ORTHO05D002245 4.6e-10 68.2 73 58.9
Medtr1g040735 Medicago truncatula HOM05D002385 ORTHO05D002245 4.6e-10 68.2 92 48.9
Psat6g029000 Pisum sativum HOM05D002385 ORTHO05D002245 4.6e-10 68.2 74 55.4
GSVIVG01015780001 Vitis vinifera HOM05D002385 ORTHO05D002245 4.6e-10 68.2 79 54.4
MD17G1127900 Malus domestica HOM05D002385 ORTHO05D002245 6.0e-10 67.8 67 59.7
Prupe.3G187200 Prunus persica HOM05D002385 ORTHO05D002245 7.8e-10 67.4 89 53.9
Migut.M00099 Erythranthe guttata HOM05D002385 ORTHO05D002245 1.0e-09 67.0 70 60.0
QL04p061381 Quercus lobata HOM05D002385 ORTHO05D002245 1.0e-09 67.0 75 57.3
CSS0046147 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 1.3e-09 66.6 67 56.7
ECA240G4719 Erigeron canadensis HOM05D002385 ORTHO05D002245 1.3e-09 66.6 78 59.0
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 1.3e-09 66.6 84 52.4
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 1.7e-09 66.2 70 55.7
Lj3g0003491 Lotus japonicus HOM05D002385 ORTHO05D002245 2.3e-09 65.9 75 56.0
HanXRQChr03g0078081 Helianthus annuus HOM05D002385 ORTHO05D002245 3.9e-09 65.1 78 59.0
Rhsim06G0138200 Rhododendron simsii HOM05D002385 ORTHO05D002245 3.9e-09 65.1 77 57.1
Glyma.15G256000 Glycine max HOM05D002385 ORTHO05D002245 5.1e-09 64.7 117 42.7
MD09G1137600 Malus domestica HOM05D002385 ORTHO05D002245 5.1e-09 64.7 66 57.6
Medtr1g040775 Medicago truncatula HOM05D002385 ORTHO05D002245 5.1e-09 64.7 76 52.6
Medtr5g042360 Medicago truncatula HOM05D002385 ORTHO05D002245 5.1e-09 64.7 76 52.6
GSVIVG01015779001 Vitis vinifera HOM05D002385 ORTHO05D002245 6.6e-09 64.3 108 39.8
Medtr2g069430 Medicago truncatula HOM05D002385 ORTHO05D002245 8.7e-09 63.9 75 60.0
Prupe.3G187300 Prunus persica HOM05D002385 ORTHO05D002245 1.1e-08 63.5 72 58.3
QL04p061357 Quercus lobata HOM05D002385 ORTHO05D002245 1.1e-08 63.5 75 54.7
QL04p073225 Quercus lobata HOM05D002385 ORTHO05D002245 1.5e-08 63.2 104 38.5
Duzib133G1087 Durio zibethinus HOM05D002385 ORTHO05D002245 1.9e-08 62.8 79 55.7
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 1.9e-08 62.8 82 51.2
TPR.G9755 Trifolium pratense HOM05D002385 ORTHO05D002245 1.9e-08 62.8 75 56.0
DCAR_016934 Daucus carota HOM05D002385 ORTHO05D002245 3.3e-08 62.0 78 51.3
ECA236G0309 Erigeron canadensis HOM05D002385 ORTHO05D002245 3.3e-08 62.0 82 54.9
TWI34G0572 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 3.3e-08 62.0 81 54.3
Cfa023569 Carpinus fangiana HOM05D002385 ORTHO05D002245 4.3e-08 61.6 50 72.0
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 5.6e-08 61.2 70 60.0
Lj3g0007335 Lotus japonicus HOM05D002385 ORTHO05D002245 5.6e-08 61.2 80 51.2
TAR627G0329 Trochodendron aralioides HOM05D002385 ORTHO05D002245 5.6e-08 61.2 52 67.3
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 1.3e-07 60.1 93 41.9
Ca_03673_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 1.3e-07 60.1 69 56.5
Glyma.08G170900 Glycine max HOM05D002385 ORTHO05D002245 1.3e-07 60.1 84 52.4
Gohir.A07G184100 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.3e-07 60.1 82 48.8
Gorai.001G092800 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.6e-07 59.7 81 51.9
Nitab4.5_0003177g0010 Nicotiana tabacum HOM05D002385 ORTHO05D002245 1.6e-07 59.7 79 57.0
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 2.1e-07 59.3 93 45.2
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 2.1e-07 59.3 78 47.4
Lj6g0002718 Lotus japonicus HOM05D002385 ORTHO05D002245 2.1e-07 59.3 67 58.2
Oeu012375.1 Olea europaea HOM05D002385 ORTHO05D002245 2.1e-07 59.3 79 51.9
Prupe.6G185200 Prunus persica HOM05D002385 ORTHO05D002245 2.1e-07 59.3 70 58.6
unitig_699.g19631 Utricularia gibba HOM05D002385 ORTHO05D002245 2.1e-07 59.3 78 56.4
Glyma.08G172300 Glycine max HOM05D002385 ORTHO05D002245 2.8e-07 58.9 79 54.4
RcHm_v2.0_Chr2g0114521 Rosa chinensis HOM05D002385 ORTHO05D002245 2.8e-07 58.9 70 57.1
PGSC0003DMG400019578 Solanum tuberosum HOM05D002385 ORTHO05D002245 2.8e-07 58.9 79 55.7
Gohir.D07G086800 Gossypium hirsutum HOM05D002385 ORTHO05D002245 3.6e-07 58.5 81 50.6
Sabra06G0015400 Salix brachista HOM05D002385 ORTHO05D002245 3.6e-07 58.5 68 58.8
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 4.8e-07 58.2 76 53.9
Cc05_g00090 Coffea canephora HOM05D002385 ORTHO05D002245 4.8e-07 58.2 80 53.8
FvH4_1g21001 Fragaria vesca HOM05D002385 ORTHO05D002245 4.8e-07 58.2 82 50.0
CAN.G1202.1 Capsicum annuum HOM05D002385 ORTHO05D002245 6.2e-07 57.8 82 53.7
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 6.2e-07 57.8 82 54.9
FAN23G3060 Fragaria x ananassa HOM05D002385 ORTHO05D002245 6.2e-07 57.8 54 64.8
Aqoxy1G01477 Aquilegia oxysepala HOM05D002385 ORTHO05D002245 8.1e-07 57.4 75 50.7
Glyma.13G003300 Glycine max HOM05D002385 ORTHO05D002245 8.1e-07 57.4 75 53.3
Glyma.15G256200 Glycine max HOM05D002385 ORTHO05D002245 8.1e-07 57.4 65 53.8
Gohir.A07G081200 Gossypium hirsutum HOM05D002385 ORTHO05D002245 8.1e-07 57.4 58 58.6
Manes.11G006500 Manihot esculenta HOM05D002385 ORTHO05D002245 8.1e-07 57.4 94 41.5
Haze_13593 Corylus avellana HOM05D002385 ORTHO05D002245 1.1e-06 57.0 71 52.1
RcHm_v2.0_Chr2g0114501 Rosa chinensis HOM05D002385 ORTHO05D002245 1.1e-06 57.0 68 57.4
Solyc05g016060.4 Solanum lycopersicum HOM05D002385 ORTHO05D002245 1.1e-06 57.0 107 47.7
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 1.4e-06 56.6 88 44.3
Glyma.08G170700 Glycine max HOM05D002385 ORTHO05D002245 1.4e-06 56.6 74 48.6
Sopen05g012340 Solanum pennellii HOM05D002385 ORTHO05D002245 1.4e-06 56.6 73 57.5
HPP92_004187 Vanilla planifolia HOM05D002385 ORTHO05D002245 1.4e-06 56.6 90 44.4
RcHm_v2.0_Chr2g0153751 Rosa chinensis HOM05D002385 ORTHO05D002245 1.8e-06 56.2 67 55.2
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 1.8e-06 56.2 79 44.3
TPR.G9734 Trifolium pratense HOM05D002385 ORTHO05D002245 1.8e-06 56.2 79 53.2
Cpa.g.sc7.104 Carica papaya HOM05D002385 ORTHO05D002245 2.4e-06 55.8 63 50.8
Ca_22650_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 2.4e-06 55.8 67 58.2
Glyma.15G256300 Glycine max HOM05D002385 ORTHO05D002245 3.1e-06 55.5 73 49.3
Thecc.07G152000 Theobroma cacao HOM05D021429 ORTHO05D022417 3.1e-06 55.5 74 43.2
TPR.G9750 Trifolium pratense HOM05D002385 ORTHO05D002245 3.1e-06 55.5 76 48.7
Medtr2g069400 Medicago truncatula HOM05D002385 ORTHO05D002245 4.0e-06 55.1 76 48.7
Psat1g003480 Pisum sativum HOM05D002385 ORTHO05D002245 4.0e-06 55.1 76 46.1
Prupe.6G185500 Prunus persica HOM05D002385 ORTHO05D002245 5.3e-06 54.7 71 54.9
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 6.9e-06 54.3 84 52.4
vmacro12336 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 6.9e-06 54.3 79 53.2
Haze_13594 Corylus avellana HOM05D002385 ORTHO05D002245 9.0e-06 53.9 61 60.7
FAN26G3044 Fragaria x ananassa HOM05D002385 ORTHO05D002245 9.0e-06 53.9 65 60.0
Psat1g003560 Pisum sativum HOM05D002385 ORTHO05D002245 9.0e-06 53.9 80 47.5
Prupe.6G185600 Prunus persica HOM05D002385 ORTHO05D002245 9.0e-06 53.9 50 68.0


User provided reference genes

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