Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.0e-202 708.8 497 100.0
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 2.3e-85 320.5 197 92.4
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.5e-81 306.6 197 87.3
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 1.1e-71 275.0 258 62.8
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.6e-70 271.2 197 72.1
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.4e-66 258.1 200 66.5
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 4.1e-66 256.5 150 82.0
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 5.4e-66 256.1 226 61.9
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 7.0e-66 255.8 200 66.0
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 9.2e-66 255.4 147 84.4
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 2.7e-65 253.8 159 76.7
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 4.6e-65 253.1 148 83.1
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 5.9e-65 252.7 148 83.1
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 5.9e-65 252.7 150 82.0
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 7.8e-65 252.3 147 82.3
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 7.8e-65 252.3 150 81.3
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 7.8e-65 252.3 147 83.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 7.8e-65 252.3 150 80.7
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 1.7e-64 251.1 211 64.5
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 1.7e-64 251.1 211 64.5
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.3e-64 250.8 185 68.1
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 2.3e-64 250.8 147 81.6
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 3.9e-64 250.0 147 82.3
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 8.6e-64 248.8 147 81.0
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 1.5e-63 248.1 147 80.3
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.9e-63 247.7 150 79.3
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 2.5e-63 247.3 147 82.3
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 4.3e-63 246.5 147 81.0
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 4.3e-63 246.5 147 82.3
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 5.6e-63 246.1 147 81.0
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 5.6e-63 246.1 146 82.2
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 5.6e-63 246.1 188 68.1
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 7.3e-63 245.7 188 67.6
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 7.3e-63 245.7 147 80.3
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 9.5e-63 245.4 147 80.3
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 9.5e-63 245.4 146 81.5
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 9.5e-63 245.4 147 81.0
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 1.6e-62 244.6 182 68.1
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.6e-62 244.6 146 80.8
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 1.6e-62 244.6 150 77.3
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 2.1e-62 244.2 185 66.5
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 2.8e-62 243.8 147 80.3
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 2.8e-62 243.8 147 80.3
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 2.8e-62 243.8 150 78.7
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 3.6e-62 243.4 183 65.6
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 3.6e-62 243.4 147 79.6
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 6.2e-62 242.7 147 78.9
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 6.2e-62 242.7 207 60.9
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 8.0e-62 242.3 150 79.3
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.0e-61 241.9 147 78.9
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.0e-61 241.9 147 78.9
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.4e-61 241.5 160 73.8
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.8e-61 241.1 147 77.6
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.8e-61 241.1 147 78.9
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.8e-61 241.1 146 78.1
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 2.3e-61 240.7 147 78.9
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 3.1e-61 240.4 147 77.6
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 5.2e-61 239.6 132 89.4
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 5.2e-61 239.6 147 78.2
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 5.2e-61 239.6 150 78.7
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 6.8e-61 239.2 147 81.0
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 8.9e-61 238.8 147 78.9
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 8.9e-61 238.8 146 79.5
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.2e-60 238.4 147 77.6
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 2.6e-60 237.3 146 77.4
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 3.4e-60 236.9 147 79.6
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 3.4e-60 236.9 154 77.9
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 9.8e-60 235.3 147 78.2
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.3e-59 235.0 147 78.9
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 2.9e-59 233.8 147 76.2
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 4.9e-59 233.0 150 74.0
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 3.2e-58 230.3 145 77.2
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 2.7e-57 227.3 148 73.6
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 6.0e-57 226.1 150 77.3
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.0e-56 225.3 150 72.0
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.0e-56 225.3 150 72.0
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 1.3e-56 224.9 146 76.0
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 1.3e-56 224.9 146 76.0
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 1.7e-56 224.6 148 75.7
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 2.3e-56 224.2 146 76.0
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.3e-56 224.2 146 76.0
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 5.0e-56 223.0 146 76.0
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 6.6e-56 222.6 146 75.3
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 6.6e-56 222.6 146 74.7
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.1e-55 221.9 146 74.7
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 1.5e-55 221.5 148 70.9
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.9e-55 221.1 143 74.8
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 3.3e-55 220.3 150 73.3
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 5.6e-55 219.5 170 68.2
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 1.6e-54 218.0 150 71.3
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 2.1e-54 217.6 150 72.0
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 2.8e-54 217.2 147 72.8
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 8.9e-53 212.2 147 72.8
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 1.3e-48 198.4 155 61.9
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 1.5e-47 194.9 135 71.1
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 2.9e-43 180.6 143 58.7
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 1.9e-42 177.9 156 53.8
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 6.0e-41 172.9 131 66.4
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 6.9e-37 159.5 96 81.2
Rhsim09G0035500 Rhododendron simsii HOM05D057533 ORTHO05D339599 2.0e-36 157.9 257 76.7
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 1.3e-35 155.2 142 51.4
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 8.4e-35 152.5 93 80.6
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.0e-32 145.6 172 49.4
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.3e-32 144.4 172 49.4
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.3e-31 140.6 109 70.6
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.8e-30 137.5 98 68.4
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 2.4e-29 134.4 98 69.4
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 1.4e-26 125.2 129 54.3
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 2.4e-26 124.4 129 48.1
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 7.9e-25 119.4 116 49.1
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.1e-23 115.5 90 62.2
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 9.6e-23 112.5 152 46.1
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.9e-18 98.2 55 90.9
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 2.7e-17 94.4 55 80.0
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.0e-16 90.9 80 61.2
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 7.6e-12 76.3 65 56.9
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.7e-11 75.1 58 63.8
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 2.2e-11 74.7 127 47.2
Dinv13618 Davidia involucrata HOM05D009440 ORTHO05D011919 2.9e-11 74.3 269 39.8
Rhsim08G0015200 Rhododendron simsii HOM05D057533 ORTHO05D339196 3.8e-11 73.9 139 61.9
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 3.8e-11 73.9 45 75.6
Actinidia06521 Actinidia chinensis HOM05D009440 ORTHO05D011919 8.4e-11 72.8 131 43.5
Rhsim08G0015100 Rhododendron simsii HOM05D009440 ORTHO05D339649 3.0e-08 64.3 102 79.4
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.5e-07 62.0 40 72.5
Rhsim08G0015300 Rhododendron simsii HOM05D035400 ORTHO05D338650 1.5e-07 62.0 56 66.1
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.5e-07 61.2 127 48.8
Actinidia27134 Actinidia chinensis HOM05D009440 ORTHO05D011919 9.7e-07 59.3 112 38.4
Dinv13617 Davidia involucrata HOM05D009440 ORTHO05D011919 2.8e-06 57.8 284 47.9


User provided reference genes

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