Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 3.1e-204 714.9 370 100.0
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.4e-175 619.0 400 80.0
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 2.0e-166 589.3 376 77.7
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 2.1e-160 569.3 381 76.4
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 9.0e-159 563.9 325 85.5
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 2.2e-157 559.3 364 76.4
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 4.9e-157 558.1 323 82.0
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 2.4e-156 555.8 374 75.1
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 5.4e-156 554.7 323 82.0
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 1.6e-155 553.1 323 82.7
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.3e-154 550.1 320 83.1
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 5.1e-154 548.1 323 81.1
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 5.1e-154 548.1 323 81.4
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 5.1e-154 548.1 369 75.3
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.5e-153 546.6 329 81.2
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.3e-152 543.5 323 80.2
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 2.1e-152 542.7 321 81.3
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 1.4e-151 540.0 321 80.7
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.8e-151 539.7 322 79.8
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 4.0e-151 538.5 321 80.1
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 5.3e-151 538.1 341 76.8
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 9.0e-151 537.3 323 80.5
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 9.0e-151 537.3 322 79.5
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.4e-150 535.4 321 81.0
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 4.5e-150 535.0 321 79.1
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 6.5e-149 531.2 320 79.4
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 6.5e-149 531.2 322 80.1
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.1e-148 530.4 323 78.9
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 1.4e-148 530.0 360 73.9
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 1.9e-148 529.6 320 79.4
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.2e-148 528.5 323 78.6
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 7.1e-148 527.7 320 78.8
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 3.5e-147 525.4 320 78.4
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 4.6e-147 525.0 321 77.6
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 6.0e-147 524.6 323 78.3
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.0e-146 523.9 320 77.2
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 1.3e-146 523.5 321 78.2
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.8e-146 523.1 321 78.5
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.8e-146 523.1 359 71.0
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.1e-145 520.4 320 77.2
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 2.1e-144 516.2 330 80.6
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 3.7e-144 515.4 279 90.3
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 3.7e-144 515.4 320 77.2
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 5.3e-143 511.5 374 68.4
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 2.0e-142 509.6 346 69.4
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 2.0e-142 509.6 321 75.4
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 7.6e-142 507.7 322 74.2
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.7e-141 506.5 367 68.1
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 2.2e-141 506.1 320 74.7
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.2e-141 506.1 367 67.8
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 2.2e-141 506.1 367 67.8
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 5.0e-141 505.0 362 69.1
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 2.1e-139 499.6 385 66.0
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 4.6e-139 498.4 329 73.6
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 7.9e-139 497.7 321 74.1
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.1e-137 493.8 322 72.7
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 1.3e-136 490.3 320 72.5
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 6.3e-136 488.0 322 71.7
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 2.4e-135 486.1 486 55.3
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.2e-131 473.8 326 74.2
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.1e-129 467.2 334 70.7
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 2.8e-128 462.6 341 68.3
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 5.5e-124 448.4 335 69.3
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 2.6e-121 439.5 300 73.0
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 5.7e-121 438.3 266 78.9
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 3.1e-119 432.6 267 76.4
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 9.1e-111 404.4 322 60.2
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 3.5e-110 402.5 290 69.0
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 4.5e-110 402.1 277 68.6
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 4.2e-108 395.6 325 60.0
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.0e-106 391.0 267 68.9
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 3.0e-106 389.4 320 65.9
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.1e-99 366.7 318 53.8
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.5e-94 349.4 277 65.0
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 1.5e-92 344.0 320 57.5
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 4.6e-86 322.4 186 81.2
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 4.9e-80 302.4 315 48.6
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 2.4e-79 300.1 183 78.7
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 1.3e-77 294.3 325 44.3
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.3e-77 294.3 177 80.8
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 7.3e-76 288.5 205 65.9
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.3e-74 283.5 320 46.9
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 7.5e-73 278.5 234 60.3
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 7.1e-71 271.9 176 73.9
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 2.5e-68 263.5 396 39.1
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 5.6e-68 262.3 211 61.1
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 2.9e-64 250.0 257 53.3
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 3.2e-63 246.5 249 53.4
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 1.0e-61 241.5 252 52.0
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 5.1e-61 239.2 220 54.1
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 9.6e-60 235.0 332 39.5
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.1e-50 204.9 303 36.3
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 3.4e-49 199.9 305 37.7
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 7.6e-49 198.7 318 36.8
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 9.9e-49 198.4 303 37.3
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 2.2e-48 197.2 120 80.0
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 8.4e-48 195.3 141 67.4
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 1.9e-47 194.1 306 36.9
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.6e-46 189.5 319 34.2
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.3e-44 183.3 119 72.3
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 6.9e-42 175.6 94 91.5
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 1.3e-40 171.4 203 48.8
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.4e-39 167.9 311 34.7
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 1.6e-38 164.5 319 31.3
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 6.0e-38 162.5 102 72.5
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.8e-35 153.7 142 57.7
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 6.9e-34 149.1 138 55.8
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 3.4e-33 146.7 128 59.4
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 6.3e-27 125.9 172 40.7
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 6.1e-22 109.4 87 63.2
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.9e-20 104.4 56 87.5
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 9.7e-20 102.1 56 85.7
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 1.3e-19 101.7 249 29.3
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 5.1e-13 79.7 45 80.0
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 2.0e-12 77.8 234 26.1
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 7.4e-12 75.9 54 64.8
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.7e-11 74.7 253 24.9
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 8.2e-11 72.4 57 63.2
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 9.1e-10 68.9 245 26.5
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 1.3e-08 65.1 87 39.1
SMO358G0637 Selaginella moellendorffii HOM05D005748 ORTHO05D007123 1.4e-07 61.6 116 35.3
Aqoxy6G01753 Aquilegia oxysepala HOM05D003793 ORTHO05D004471 5.5e-07 59.7 146 34.9
Cre14.g624350 Chlamydomonas reinhardtii HOM05D003793 ORTHO05D004471 9.4e-07 58.9 114 33.3
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 2.1e-06 57.8 193 29.0
Lalb_Chr05g0211181 Lupinus albus HOM05D003793 ORTHO05D004471 3.6e-06 57.0 183 27.3
Nn3g16801 Nelumbo nucifera HOM05D005748 ORTHO05D007123 3.6e-06 57.0 109 35.8


User provided reference genes

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