Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 6.8e-285 983.4 529 100.0
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 6.4e-243 844.0 552 82.2
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.4e-226 789.6 527 80.8
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 5.9e-220 767.7 530 77.7
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 3.1e-213 745.3 529 74.5
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 3.3e-199 698.7 529 72.0
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 8.2e-198 694.1 525 71.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 3.1e-197 692.2 529 70.9
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.2e-196 690.3 529 71.3
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.0e-192 677.2 529 69.8
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.4e-192 676.8 525 68.6
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 5.2e-192 674.9 533 70.9
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.5e-191 673.3 528 68.9
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 7.5e-191 671.0 528 69.3
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.3e-190 670.2 525 70.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.2e-190 669.5 529 70.5
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.2e-190 669.5 528 69.1
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 3.7e-190 668.7 516 69.2
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.7e-190 668.7 529 70.5
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 4.8e-190 668.3 529 68.2
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 4.8e-190 668.3 529 68.1
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 6.3e-190 667.9 529 70.3
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 8.2e-190 667.5 529 69.0
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 8.2e-190 667.5 529 67.3
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.4e-189 666.8 525 68.2
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 4.1e-189 665.2 529 67.7
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 4.1e-189 665.2 529 68.2
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 7.0e-189 664.5 529 68.8
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.1e-189 664.1 529 70.1
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 4.5e-188 661.8 525 67.2
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 5.0e-187 658.3 511 68.9
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.1e-186 657.1 521 66.2
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.2e-186 655.6 529 69.0
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.2e-186 655.6 546 64.1
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.0e-184 650.6 525 67.2
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.3e-184 649.4 529 67.3
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 5.2e-184 648.3 525 66.9
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 6.8e-184 647.9 525 64.4
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 8.8e-184 647.5 525 66.3
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-183 647.1 529 69.2
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.2e-183 647.1 523 68.3
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 5.7e-183 644.8 525 67.6
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 3.7e-182 642.1 534 65.7
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 4.1e-181 638.6 529 66.0
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 4.1e-181 638.6 526 67.1
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 9.1e-181 637.5 521 66.8
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.2e-180 637.1 529 65.2
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 2.0e-180 636.3 525 64.0
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 5.9e-180 634.8 528 65.3
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 2.3e-179 632.9 529 65.0
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 2.9e-179 632.5 529 65.6
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 3.8e-179 632.1 538 63.4
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 5.0e-179 631.7 529 65.4
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 6.5e-179 631.3 529 66.2
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 7.2e-178 627.9 525 65.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 9.5e-178 627.5 529 63.7
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.6e-177 626.7 526 66.3
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 8.0e-177 624.4 529 63.9
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 8.0e-177 624.4 525 65.5
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 5.2e-176 621.7 535 63.9
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 5.2e-176 621.7 521 67.6
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.6e-175 619.4 529 63.3
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.6e-175 619.4 529 63.3
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 3.4e-175 619.0 525 65.5
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 3.7e-174 615.5 529 64.5
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 8.3e-174 614.4 524 64.7
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 8.6e-171 604.4 601 57.9
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.1e-170 604.0 525 63.4
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 5.6e-170 601.7 525 63.0
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 9.5e-170 600.9 531 63.3
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 9.5e-170 600.9 531 62.3
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 1.2e-169 600.5 525 63.0
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.0e-168 597.4 530 62.1
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 8.9e-168 594.3 525 62.9
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.2e-167 594.0 525 62.5
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.2e-167 594.0 529 61.4
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 5.7e-167 591.7 525 62.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.0e-163 580.9 529 62.9
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.6e-161 573.5 500 62.2
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 2.8e-161 572.8 525 61.0
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.8e-159 565.1 540 58.5
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.9e-158 562.8 525 60.4
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 6.4e-158 561.6 511 60.3
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 3.2e-157 559.3 533 59.1
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 3.0e-155 552.7 529 59.7
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 3.0e-155 552.7 529 59.7
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 8.6e-155 551.2 529 59.5
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.5e-154 549.7 529 59.4
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.5e-154 549.7 529 59.4
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 4.0e-152 542.3 533 56.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 4.1e-149 532.3 532 55.1
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 5.4e-149 531.9 442 66.1
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.7e-148 529.6 526 55.7
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.4e-144 516.5 512 55.7
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 2.1e-140 503.4 442 62.2
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.7e-118 430.6 458 53.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.6e-113 414.1 371 60.1
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 7.9e-108 395.2 410 57.8
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 2.1e-100 370.5 537 40.6
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 2.5e-93 347.1 534 41.4
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.3e-91 340.5 301 65.8
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 7.4e-90 335.5 314 62.4
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 6.1e-84 315.8 546 38.8
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 4.8e-81 306.2 260 66.9
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 7.0e-80 302.4 568 36.3
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 9.4e-77 292.0 532 36.3
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.6e-76 290.0 193 78.2
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.5e-74 284.6 182 78.6
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 5.3e-72 276.2 196 69.9
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 3.5e-71 273.5 380 50.3
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 3.3e-53 213.8 176 67.0
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.1e-48 198.7 203 57.6
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 3.2e-48 197.2 195 54.4
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.3e-38 165.2 151 58.3
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 3.7e-33 147.1 157 60.5
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 6.4e-33 146.4 542 25.8
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 4.6e-15 87.0 54 88.9
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.1e-08 65.9 42 73.8
RcHm_v2.0_Chr3g0480231 Rosa chinensis HOM05D006621 ORTHO05D043305 5.1e-06 57.0 41 78.0


User provided reference genes

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