Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.1e-220 769.6 371 100.0
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 3.2e-196 688.3 371 90.0
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 6.6e-194 680.6 371 88.7
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 8.6e-194 680.2 371 89.2
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 4.3e-193 677.9 371 88.4
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.2e-192 676.4 371 88.1
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 8.1e-192 673.7 371 87.9
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.1e-191 673.3 371 87.9
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 5.2e-191 671.0 368 87.0
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.2e-190 669.8 371 87.6
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 3.4e-190 668.3 371 86.8
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 1.3e-189 666.4 367 87.5
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.7e-189 666.0 368 86.7
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 8.4e-189 663.7 371 86.3
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 4.1e-188 661.4 368 85.9
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 5.4e-188 661.0 371 84.6
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 7.1e-188 660.6 371 86.0
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.2e-187 659.8 371 86.0
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 2.1e-187 659.1 371 84.6
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 2.7e-187 658.7 371 84.4
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.7e-186 656.0 369 84.8
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 3.9e-186 654.8 369 84.6
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 5.1e-186 654.4 368 85.3
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 6.6e-186 654.1 371 84.6
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.1e-185 653.3 371 86.3
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 1.1e-185 653.3 371 84.6
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.5e-185 652.9 371 83.8
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.5e-185 652.9 371 83.8
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 2.5e-185 652.1 371 83.3
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 4.3e-185 651.4 371 84.1
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 7.3e-185 650.6 371 83.3
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 1.2e-184 649.8 372 84.1
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.6e-184 649.4 371 82.7
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.8e-184 648.7 367 83.4
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 4.7e-184 647.9 369 83.5
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.1e-183 646.7 371 83.3
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 1.1e-183 646.7 371 83.3
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.4e-183 645.6 371 82.2
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 6.8e-183 644.0 371 82.5
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 6.8e-183 644.0 371 82.5
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 8.9e-183 643.7 370 84.6
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.2e-182 643.3 367 82.6
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.5e-182 642.9 371 81.4
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.0e-182 642.5 371 83.0
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 2.0e-182 642.5 368 82.9
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 3.4e-182 641.7 371 82.5
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 4.4e-182 641.3 371 82.5
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 4.4e-182 641.3 368 82.3
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 2.9e-181 638.6 369 83.2
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 4.9e-181 637.9 389 78.9
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 2.4e-180 635.6 371 81.7
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 5.4e-180 634.4 371 82.2
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 7.1e-180 634.0 406 76.6
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 7.1e-180 634.0 371 81.9
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.2e-179 633.3 371 81.7
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 1.6e-179 632.9 428 73.8
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 6.0e-179 630.9 370 82.2
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.0e-179 630.9 370 82.2
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.3e-178 629.8 370 81.9
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.7e-178 629.4 371 80.9
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 5.1e-178 627.9 367 80.7
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 5.1e-178 627.9 426 73.7
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 3.3e-177 625.2 368 80.4
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 4.3e-177 624.8 370 81.4
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 5.6e-177 624.4 371 79.5
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 7.3e-177 624.0 370 81.6
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.3e-176 623.2 370 81.4
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 6.2e-176 620.9 349 84.5
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.2e-174 616.7 369 79.1
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 3.4e-174 615.1 369 79.1
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 9.9e-174 613.6 369 78.3
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.7e-173 612.8 410 73.2
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 4.9e-173 611.3 369 78.0
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.4e-172 609.8 367 79.3
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 2.7e-171 605.5 369 77.5
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 2.7e-171 605.5 369 77.5
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 2.7e-171 605.5 369 77.5
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 2.7e-171 605.5 367 77.9
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 3.5e-171 605.1 369 77.2
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 3.5e-171 605.1 369 77.5
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.0e-170 603.6 370 79.5
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 5.1e-170 601.3 369 76.7
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.1e-169 600.1 397 72.8
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 2.5e-169 599.0 368 77.2
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 9.6e-169 597.0 367 77.4
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 6.9e-167 590.9 369 76.4
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 2.6e-166 589.0 369 76.2
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 3.4e-166 588.6 369 76.2
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 5.8e-166 587.8 371 75.7
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 1.7e-165 586.3 371 75.5
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 2.2e-165 585.9 370 77.6
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 2.1e-163 579.3 376 72.3
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.3e-162 576.6 376 71.3
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.1e-161 573.5 323 85.8
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 2.6e-158 562.4 293 91.5
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 7.1e-156 554.3 371 73.6
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 1.3e-154 550.1 367 71.1
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 3.9e-154 548.5 375 74.7
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 2.1e-152 542.7 346 75.1
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 9.0e-151 537.3 293 87.0
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 5.9e-150 534.6 322 80.7
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.1e-140 503.8 352 71.9
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 6.1e-139 498.0 367 66.8
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.5e-137 493.4 367 65.4
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 8.2e-136 487.6 368 64.1
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 4.1e-135 485.3 369 64.8
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 3.1e-127 459.1 371 65.0
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.5e-124 450.3 374 62.6
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 6.7e-122 441.4 262 82.8
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 8.8e-122 441.0 378 58.5
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 1.1e-121 440.7 252 86.9
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 4.7e-115 418.7 211 92.4
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 7.0e-111 404.8 252 79.0
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 1.2e-94 350.9 215 79.5
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.5e-70 269.6 152 78.3
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 4.6e-70 269.2 190 73.2
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.9e-64 250.0 154 74.7
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 5.4e-63 245.7 119 93.3
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 5.8e-57 225.7 126 81.0
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 4.5e-49 199.5 326 39.0
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.7e-48 197.6 217 52.1
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.9e-39 167.5 98 84.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.3e-35 154.8 117 69.2
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 8.2e-27 125.6 59 93.2
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 2.6e-20 104.0 79 68.4
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 7.4e-20 102.4 121 49.6
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 2.5e-15 87.4 51 70.6
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 4.2e-15 86.7 37 100.0
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 4.1e-10 70.1 104 43.3
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.2e-09 68.6 247 27.5


User provided reference genes

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